RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 KCNF1Q9H3M0 494 aa23.25■■□□□ 1.31
CCDC78-207ENST00000466708 ZNF277Q9NRM2 450 aaPredicted RBP23.25■■□□□ 1.31
CCDC78-207ENST00000466708 HERC5Q9UII4 1024 aaKnown RBP23.25■■□□□ 1.31
CCDC78-207ENST00000466708 FAM196BA6NMK8 535 aa23.24■■□□□ 1.31
CCDC78-207ENST00000466708 RAD17O75943 681 aa23.24■■□□□ 1.31
CCDC78-207ENST00000466708 DLGAP5Q15398 846 aa23.24■■□□□ 1.31
CCDC78-207ENST00000466708 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.24■■□□□ 1.31
CCDC78-207ENST00000466708 CCDC125Q86Z20 511 aa23.24■■□□□ 1.31
CCDC78-207ENST00000466708 PIM2Q9P1W9 311 aa23.24■■□□□ 1.31
CCDC78-207ENST00000466708 ZBTB5O15062 677 aa23.24■■□□□ 1.31
CCDC78-207ENST00000466708 SLURP2P0DP57 97 aa23.24■■□□□ 1.31
CCDC78-207ENST00000466708 ICA1Q05084 483 aa23.24■■□□□ 1.31
CCDC78-207ENST00000466708 DPYDQ12882 1025 aa23.24■■□□□ 1.31
CCDC78-207ENST00000466708 TMEM60Q9H2L4 133 aa23.24■■□□□ 1.31
CCDC78-207ENST00000466708 ZNRF3Q9ULT6 936 aa23.24■■□□□ 1.31
CCDC78-207ENST00000466708 AFMP43652 599 aa23.23■■□□□ 1.31
CCDC78-207ENST00000466708 SEPT2Q15019 361 aa23.23■■□□□ 1.31
CCDC78-207ENST00000466708 TTBK2Q6IQ55 1244 aa23.23■■□□□ 1.31
CCDC78-207ENST00000466708 NIM1KQ8IY84 436 aa23.23■■□□□ 1.31
CCDC78-207ENST00000466708 AGBL3Q8NEM8 1001 aa23.23■■□□□ 1.31
CCDC78-207ENST00000466708 COA7Q96BR5 231 aa23.23■■□□□ 1.31
CCDC78-207ENST00000466708 AK8Q96MA6 479 aa23.23■■□□□ 1.31
CCDC78-207ENST00000466708 CSRNP1Q96S65 589 aa23.23■■□□□ 1.31
CCDC78-207ENST00000466708 RIC8AQ9NPQ8 531 aa23.23■■□□□ 1.31
CCDC78-207ENST00000466708 NRBP1Q9UHY1 535 aa23.23■■□□□ 1.31
CCDC78-207ENST00000466708 SYNPO2Q9UMS6 1093 aa23.23■■□□□ 1.31
CCDC78-207ENST00000466708 NEMFO60524 1076 aa23.22■■□□□ 1.31
CCDC78-207ENST00000466708 CCNT1O60563 726 aaKnown RBP23.22■■□□□ 1.31
CCDC78-207ENST00000466708 LETM2Q2VYF4 491 aa23.22■■□□□ 1.31
CCDC78-207ENST00000466708 RBM26Q5T8P6 1007 aaKnown RBP23.22■■□□□ 1.31
CCDC78-207ENST00000466708 FKBP1CQ5VVH2 108 aa23.22■■□□□ 1.31
CCDC78-207ENST00000466708 SLFN13Q68D06 897 aa23.22■■□□□ 1.31
CCDC78-207ENST00000466708 KCTD1Q719H9 257 aa23.22■■□□□ 1.31
CCDC78-207ENST00000466708 GMCL1P1Q8NEA9 526 aa23.22■■□□□ 1.31
CCDC78-207ENST00000466708 TBCKQ8TEA7 893 aa23.22■■□□□ 1.31
CCDC78-207ENST00000466708 GLT8D2Q9H1C3 349 aa23.22■■□□□ 1.31
CCDC78-207ENST00000466708 BIN2Q9UBW5 565 aaPredicted RBP23.22■■□□□ 1.31
CCDC78-207ENST00000466708 OR52Z1P0C646 297 aa23.22■■□□□ 1.31
CCDC78-207ENST00000466708 ERCC5P28715 1186 aaPredicted RBP23.22■■□□□ 1.31
CCDC78-207ENST00000466708 SLC1A4P43007 532 aa23.22■■□□□ 1.31
CCDC78-207ENST00000466708 PDXDC2PQ6P474 469 aa23.22■■□□□ 1.31
CCDC78-207ENST00000466708 MTMR14Q8NCE2 650 aa23.22■■□□□ 1.31
CCDC78-207ENST00000466708 ENOX1Q8TC92 643 aaKnown RBP23.22■■□□□ 1.31
CCDC78-207ENST00000466708 FAM151AQ8WW52 585 aa23.22■■□□□ 1.31
CCDC78-207ENST00000466708 CCSER1Q9C0I3 900 aa23.22■■□□□ 1.31
CCDC78-207ENST00000466708 HSD3B7Q9H2F3 369 aa23.22■■□□□ 1.31
CCDC78-207ENST00000466708 IMPACTQ9P2X3 320 aa23.22■■□□□ 1.31
CCDC78-207ENST00000466708 ZNF70Q9UC06 446 aaPredicted RBP23.22■■□□□ 1.31
CCDC78-207ENST00000466708 LMOD1P29536 600 aaPredicted RBP23.21■■□□□ 1.31
CCDC78-207ENST00000466708 DHX8Q14562 1220 aaKnown RBP23.21■■□□□ 1.31
CCDC78-207ENST00000466708 JAKMIP3Q5VZ66 844 aa23.21■■□□□ 1.31
CCDC78-207ENST00000466708 SIAH1Q8IUQ4 282 aa23.21■■□□□ 1.31
CCDC78-207ENST00000466708 KIAA1524Q8TCG1 905 aa23.21■■□□□ 1.31
CCDC78-207ENST00000466708 IFNKQ9P0W0 207 aa23.21■■□□□ 1.31
CCDC78-207ENST00000466708 COL4A5P29400 1685 aa23.2■■□□□ 1.3
CCDC78-207ENST00000466708 CBFA2T2O43439 604 aa23.2■■□□□ 1.3
CCDC78-207ENST00000466708 UBA7P41226 1012 aa23.2■■□□□ 1.3
CCDC78-207ENST00000466708 MRPL12P52815 198 aaKnown RBP23.2■■□□□ 1.3
CCDC78-207ENST00000466708 FANCCQ00597 558 aa23.2■■□□□ 1.3
CCDC78-207ENST00000466708 NOLC1Q14978 699 aaKnown RBP eCLIP23.2■■□□□ 1.3
CCDC78-207ENST00000466708 CUL5Q93034 780 aa23.2■■□□□ 1.3
CCDC78-207ENST00000466708 GMCL1Q96IK5 515 aa23.2■■□□□ 1.3
CCDC78-207ENST00000466708 XPO4Q9C0E2 1151 aaKnown RBP23.2■■□□□ 1.3
CCDC78-207ENST00000466708 DISC1Q9NRI5 854 aa23.2■■□□□ 1.3
CCDC78-207ENST00000466708 USP17L10C9JJH3 530 aa23.19■■□□□ 1.3
CCDC78-207ENST00000466708 GTPBP6O43824 516 aaPredicted RBP23.19■■□□□ 1.3
CCDC78-207ENST00000466708 POLD1P28340 1107 aa23.19■■□□□ 1.3
CCDC78-207ENST00000466708 SLC16A2P36021 539 aa23.19■■□□□ 1.3
CCDC78-207ENST00000466708 SPDYE2Q495Y8 402 aa23.19■■□□□ 1.3
CCDC78-207ENST00000466708 PPP1R11O60927 126 aaPredicted RBP23.19■■□□□ 1.3
CCDC78-207ENST00000466708 GDF11O95390 407 aa23.19■■□□□ 1.3
CCDC78-207ENST00000466708 GSDMDP57764 484 aa23.19■■□□□ 1.3
CCDC78-207ENST00000466708 CCDC144BQ3MJ40 725 aa23.19■■□□□ 1.3
CCDC78-207ENST00000466708 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.19■■□□□ 1.3
CCDC78-207ENST00000466708 SPTLC3Q9NUV7 552 aa23.19■■□□□ 1.3
CCDC78-207ENST00000466708 TCP10L2B9ZVM9 353 aa23.18■■□□□ 1.3
CCDC78-207ENST00000466708 F5H6K3 240 aa23.18■■□□□ 1.3
CCDC78-207ENST00000466708 STAT6P42226 847 aa23.18■■□□□ 1.3
CCDC78-207ENST00000466708 CLK2P49760 499 aaKnown RBP23.18■■□□□ 1.3
CCDC78-207ENST00000466708 KLRC3Q07444 240 aa23.18■■□□□ 1.3
CCDC78-207ENST00000466708 SHROOM1Q2M3G4 852 aaPredicted RBP23.18■■□□□ 1.3
CCDC78-207ENST00000466708 CUEDC2Q9H467 287 aa23.18■■□□□ 1.3
CCDC78-207ENST00000466708 TMEM260Q9NX78 707 aa23.18■■□□□ 1.3
CCDC78-207ENST00000466708 ARFGEF1Q9Y6D6 1849 aa23.17■■□□□ 1.3
CCDC78-207ENST00000466708 GH2P01242 217 aa23.17■■□□□ 1.3
CCDC78-207ENST00000466708 MYL1P05976 194 aa23.17■■□□□ 1.3
CCDC78-207ENST00000466708 MMP14P50281 582 aa23.17■■□□□ 1.3
CCDC78-207ENST00000466708 DALRD3Q5D0E6 543 aaKnown RBP23.17■■□□□ 1.3
CCDC78-207ENST00000466708 RRAGBQ5VZM2 374 aa23.17■■□□□ 1.3
CCDC78-207ENST00000466708 FANCLQ9NW38 375 aa23.17■■□□□ 1.3
CCDC78-207ENST00000466708 ZBTB12Q9Y330 459 aaPredicted RBP23.17■■□□□ 1.3
CCDC78-207ENST00000466708 SEMA3FQ13275 785 aa23.17■■□□□ 1.3
CCDC78-207ENST00000466708 KARSQ15046 597 aaKnown RBP23.17■■□□□ 1.3
CCDC78-207ENST00000466708 LRRC8AQ8IWT6 810 aa23.17■■□□□ 1.3
CCDC78-207ENST00000466708 MTFR1LQ9H019 292 aa23.17■■□□□ 1.3
CCDC78-207ENST00000466708 MAGEF1Q9HAY2 307 aa23.17■■□□□ 1.3
CCDC78-207ENST00000466708 RMND1Q9NWS8 449 aa23.17■■□□□ 1.3
CCDC78-207ENST00000466708 PYCARDQ9ULZ3 195 aa23.17■■□□□ 1.3
CCDC78-207ENST00000466708 CLRN2A0PK11 232 aa23.16■■□□□ 1.3
CCDC78-207ENST00000466708 RAD21O60216 631 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms