RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 GPATCH4Q5T3I0 446 aaKnown RBP19.92■□□□□ 0.78
VPS52-215ENST00000464425 PRC1O43663 620 aa19.91■□□□□ 0.78
VPS52-215ENST00000464425 GJB1P08034 283 aa19.91■□□□□ 0.78
VPS52-215ENST00000464425 PARP1P09874 1014 aaKnown RBP19.91■□□□□ 0.78
VPS52-215ENST00000464425 ALAS1P13196 640 aa19.91■□□□□ 0.78
VPS52-215ENST00000464425 CACNB2Q08289 660 aaPredicted RBP19.91■□□□□ 0.78
VPS52-215ENST00000464425 MFSD14CQ5VZR4 134 aa19.91■□□□□ 0.78
VPS52-215ENST00000464425 RASEFQ8IZ41 740 aa19.91■□□□□ 0.78
VPS52-215ENST00000464425 CHST13Q8NET6 341 aa19.91■□□□□ 0.78
VPS52-215ENST00000464425 IGDCC4Q8TDY8 1250 aa19.91■□□□□ 0.78
VPS52-215ENST00000464425 DEFB118Q96PH6 123 aa19.91■□□□□ 0.78
VPS52-215ENST00000464425 RANBP17Q9H2T7 1088 aaKnown RBP19.91■□□□□ 0.78
VPS52-215ENST00000464425 HMX1Q9NP08 348 aaPredicted RBP19.91■□□□□ 0.78
VPS52-215ENST00000464425 GPHNQ9NQX3 736 aaPredicted RBP19.91■□□□□ 0.78
VPS52-215ENST00000464425 SLC5A4Q9NY91 659 aa19.91■□□□□ 0.78
VPS52-215ENST00000464425 RPTORQ8N122 1335 aa19.91■□□□□ 0.78
VPS52-215ENST00000464425 CYP2C19P33261 490 aa19.9■□□□□ 0.78
VPS52-215ENST00000464425 MCM5P33992 734 aa19.9■□□□□ 0.78
VPS52-215ENST00000464425 MLLT1Q03111 559 aaPredicted RBP19.9■□□□□ 0.78
VPS52-215ENST00000464425 ASPRV1Q53RT3 343 aa19.9■□□□□ 0.78
VPS52-215ENST00000464425 DDX11Q96FC9 970 aa19.9■□□□□ 0.78
VPS52-215ENST00000464425 TRERF1Q96PN7 1200 aa19.9■□□□□ 0.78
VPS52-215ENST00000464425 USP26Q9BXU7 913 aa19.9■□□□□ 0.78
VPS52-215ENST00000464425 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.9■□□□□ 0.78
VPS52-215ENST00000464425 RNF146Q9NTX7 359 aa19.9■□□□□ 0.78
VPS52-215ENST00000464425 CCPG1Q9ULG6 757 aa19.9■□□□□ 0.78
VPS52-215ENST00000464425 ICAM1P05362 532 aa19.89■□□□□ 0.77
VPS52-215ENST00000464425 MAP3K21Q5TCX8 1036 aa19.89■□□□□ 0.77
VPS52-215ENST00000464425 ANKRD35Q8N283 1001 aa19.89■□□□□ 0.77
VPS52-215ENST00000464425 STAG2Q8N3U4 1231 aa19.89■□□□□ 0.77
VPS52-215ENST00000464425 U2AF1L4Q8WU68 220 aaKnown RBP19.89■□□□□ 0.77
VPS52-215ENST00000464425 MAML3Q96JK9 1138 aa19.89■□□□□ 0.77
VPS52-215ENST00000464425 LRRC2Q9BYS8 371 aa19.89■□□□□ 0.77
VPS52-215ENST00000464425 ACAD9Q9H845 621 aa19.89■□□□□ 0.77
VPS52-215ENST00000464425 VAT1LQ9HCJ6 419 aa19.89■□□□□ 0.77
VPS52-215ENST00000464425 PAK6Q9NQU5 681 aaPredicted RBP19.89■□□□□ 0.77
VPS52-215ENST00000464425 FBXO40Q9UH90 709 aa19.89■□□□□ 0.77
VPS52-215ENST00000464425 CCND3P30281 292 aaPredicted RBP19.88■□□□□ 0.77
VPS52-215ENST00000464425 GJA8P48165 433 aa19.88■□□□□ 0.77
VPS52-215ENST00000464425 ZNF792Q3KQV3 632 aa19.88■□□□□ 0.77
VPS52-215ENST00000464425 TKFCQ3LXA3 575 aa19.88■□□□□ 0.77
VPS52-215ENST00000464425 TSGA10IPQ3SY00 556 aa19.88■□□□□ 0.77
VPS52-215ENST00000464425 OLFML2BQ68BL8 750 aa19.88■□□□□ 0.77
VPS52-215ENST00000464425 KCNB2Q92953 911 aa19.88■□□□□ 0.77
VPS52-215ENST00000464425 NEK1Q96PY6 1258 aa19.88■□□□□ 0.77
VPS52-215ENST00000464425 LY9Q9HBG7 655 aa19.88■□□□□ 0.77
VPS52-215ENST00000464425 ZNFX1Q9P2E3 1918 aaKnown RBP19.87■□□□□ 0.77
VPS52-215ENST00000464425 DHX16O60231 1041 aaKnown RBP19.87■□□□□ 0.77
VPS52-215ENST00000464425 SGPL1O95470 568 aa19.87■□□□□ 0.77
VPS52-215ENST00000464425 TFRCP02786 760 aaKnown RBP19.87■□□□□ 0.77
VPS52-215ENST00000464425 HSPA4P34932 840 aa19.87■□□□□ 0.77
VPS52-215ENST00000464425 ADCK5Q3MIX3 580 aa19.87■□□□□ 0.77
VPS52-215ENST00000464425 MUM1L1Q5H9M0 696 aa19.87■□□□□ 0.77
VPS52-215ENST00000464425 CATIPQ7Z7H3 387 aa19.87■□□□□ 0.77
VPS52-215ENST00000464425 ADGRF4Q8IZF3 695 aa19.87■□□□□ 0.77
VPS52-215ENST00000464425 NUP133Q8WUM0 1156 aa19.87■□□□□ 0.77
VPS52-215ENST00000464425 SHISA4Q96DD7 197 aa19.87■□□□□ 0.77
VPS52-215ENST00000464425 MAD2L2Q9UI95 211 aa19.87■□□□□ 0.77
VPS52-215ENST00000464425 KLRF2D3W0D1 207 aa19.86■□□□□ 0.77
VPS52-215ENST00000464425 SH2B2O14492 632 aaPredicted RBP19.86■□□□□ 0.77
VPS52-215ENST00000464425 IGHA2P01877 340 aa19.86■□□□□ 0.77
VPS52-215ENST00000464425 PRAMEF19Q5SWL8 479 aa19.86■□□□□ 0.77
VPS52-215ENST00000464425 NFXL1Q6ZNB6 911 aa19.86■□□□□ 0.77
VPS52-215ENST00000464425 TMEM87BQ96K49 555 aa19.86■□□□□ 0.77
VPS52-215ENST00000464425 DIS3Q9Y2L1 958 aaKnown RBP19.86■□□□□ 0.77
VPS52-215ENST00000464425 ZNF236Q9UL36 1845 aa19.86■□□□□ 0.77
VPS52-215ENST00000464425 DNAJC25-GNG10A0A024R161 153 aa19.85■□□□□ 0.77
VPS52-215ENST00000464425 PALM3A6NDB9 673 aaPredicted RBP19.85■□□□□ 0.77
VPS52-215ENST00000464425 SEC24BO95487 1268 aa19.85■□□□□ 0.77
VPS52-215ENST00000464425 CNGA1P29973 690 aa19.85■□□□□ 0.77
VPS52-215ENST00000464425 TROAPQ12815 778 aa19.85■□□□□ 0.77
VPS52-215ENST00000464425 KRT32Q14532 448 aa19.85■□□□□ 0.77
VPS52-215ENST00000464425 GRM4Q14833 912 aa19.85■□□□□ 0.77
VPS52-215ENST00000464425 CDC37Q16543 378 aaPredicted RBP19.85■□□□□ 0.77
VPS52-215ENST00000464425 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.85■□□□□ 0.77
VPS52-215ENST00000464425 TRPV1Q8NER1 839 aa19.85■□□□□ 0.77
VPS52-215ENST00000464425 TCEANC2Q96MN5 208 aa19.85■□□□□ 0.77
VPS52-215ENST00000464425 MTA3Q9BTC8 594 aa19.85■□□□□ 0.77
VPS52-215ENST00000464425 MYL10Q9BUA6 226 aa19.85■□□□□ 0.77
VPS52-215ENST00000464425 JMJD4Q9H9V9 463 aa19.85■□□□□ 0.77
VPS52-215ENST00000464425 A1CFQ9NQ94 594 aaKnown RBP19.85■□□□□ 0.77
VPS52-215ENST00000464425 CCDC69A6NI79 296 aa19.84■□□□□ 0.77
VPS52-215ENST00000464425 USH1GQ495M9 461 aa19.84■□□□□ 0.77
VPS52-215ENST00000464425 NSMFQ6X4W1 530 aa19.84■□□□□ 0.77
VPS52-215ENST00000464425 ZNF654Q8IZM8 581 aa19.84■□□□□ 0.77
VPS52-215ENST00000464425 TINF2Q9BSI4 451 aa19.84■□□□□ 0.77
VPS52-215ENST00000464425 SNX14Q9Y5W7 946 aa19.84■□□□□ 0.77
VPS52-215ENST00000464425 SMCHD1A6NHR9 2005 aa19.84■□□□□ 0.77
VPS52-215ENST00000464425 MKI67P46013 3256 aaKnown RBP19.84■□□□□ 0.77
VPS52-215ENST00000464425 POTEB2H3BUK9 544 aa19.83■□□□□ 0.77
VPS52-215ENST00000464425 NFIBO00712 420 aa19.83■□□□□ 0.77
VPS52-215ENST00000464425 EXOSC10Q01780 885 aaKnown RBP19.83■□□□□ 0.77
VPS52-215ENST00000464425 CNTN2Q02246 1040 aa19.83■□□□□ 0.77
VPS52-215ENST00000464425 DHX32Q7L7V1 743 aaKnown RBP19.83■□□□□ 0.77
VPS52-215ENST00000464425 TMTC2Q8N394 836 aa19.83■□□□□ 0.77
VPS52-215ENST00000464425 CRISPLD2Q9H0B8 497 aa19.83■□□□□ 0.77
VPS52-215ENST00000464425 RBBP6Q7Z6E9 1792 aaKnown RBP19.83■□□□□ 0.76
VPS52-215ENST00000464425 CYBAP13498 195 aa19.82■□□□□ 0.76
VPS52-215ENST00000464425 CPA1P15085 419 aa19.82■□□□□ 0.76
VPS52-215ENST00000464425 LIFRP42702 1097 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms