RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 RNF113AO15541 343 aaKnown RBP10.39□□□□□ -0.75
HDAC9-220ENST00000461409 CHGBP05060 677 aa10.39□□□□□ -0.75
HDAC9-220ENST00000461409 FCER1AP12319 257 aa10.39□□□□□ -0.75
HDAC9-220ENST00000461409 GNAT2P19087 354 aa10.39□□□□□ -0.75
HDAC9-220ENST00000461409 CYP2C19P33261 490 aa10.39□□□□□ -0.75
HDAC9-220ENST00000461409 COPB2P35606 906 aa10.39□□□□□ -0.75
HDAC9-220ENST00000461409 SBK1Q52WX2 424 aa10.39□□□□□ -0.75
HDAC9-220ENST00000461409 NCAPG2Q86XI2 1143 aa10.39□□□□□ -0.75
HDAC9-220ENST00000461409 NPLOC4Q8TAT6 608 aa10.39□□□□□ -0.75
HDAC9-220ENST00000461409 ATG4CQ96DT6 458 aa10.39□□□□□ -0.75
HDAC9-220ENST00000461409 GDF15Q99988 308 aa10.39□□□□□ -0.75
HDAC9-220ENST00000461409 IL21Q9HBE4 155 aa10.39□□□□□ -0.75
HDAC9-220ENST00000461409 MKNK2Q9HBH9 465 aa10.39□□□□□ -0.75
HDAC9-220ENST00000461409 ZMYND8Q9ULU4 1186 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-220ENST00000461409 ROBO3Q96MS0 1386 aa10.39□□□□□ -0.75
HDAC9-220ENST00000461409 A0A0G2JMZ2 1700 aa10.38□□□□□ -0.75
HDAC9-220ENST00000461409 TTC41PQ6P2S7 1318 aa10.38□□□□□ -0.75
HDAC9-220ENST00000461409 GSG1L2A8MUP6 293 aa10.38□□□□□ -0.75
HDAC9-220ENST00000461409 ERC2O15083 957 aa10.38□□□□□ -0.75
HDAC9-220ENST00000461409 RAD21O60216 631 aa10.38□□□□□ -0.75
HDAC9-220ENST00000461409 IGHA2P01877 340 aa10.38□□□□□ -0.75
HDAC9-220ENST00000461409 CYBAP13498 195 aa10.38□□□□□ -0.75
HDAC9-220ENST00000461409 MAGEA10P43363 369 aaPredicted RBP10.38□□□□□ -0.75
HDAC9-220ENST00000461409 TDO2P48775 406 aa10.38□□□□□ -0.75
HDAC9-220ENST00000461409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.38□□□□□ -0.75
HDAC9-220ENST00000461409 ARRDC4Q8NCT1 418 aa10.38□□□□□ -0.75
HDAC9-220ENST00000461409 OSBP2Q969R2 916 aa10.38□□□□□ -0.75
HDAC9-220ENST00000461409 NACAP1Q9BZK3 213 aa10.38□□□□□ -0.75
HDAC9-220ENST00000461409 PPP1R9AQ9ULJ8 1098 aa10.38□□□□□ -0.75
HDAC9-220ENST00000461409 ADAMTS5Q9UNA0 930 aa10.38□□□□□ -0.75
HDAC9-220ENST00000461409 MYH7P12883 1935 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 MYH8P13535 1937 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 BAZ2AQ9UIF9 1905 aaKnown RBP10.37□□□□□ -0.75
HDAC9-220ENST00000461409 MINDY4BA8MYZ0 360 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 KBTBD13C9JR72 458 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 SMIM22K7EJ46 135 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 VWA5AO00534 786 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 SEPT4O43236 478 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 GPAA1O43292 621 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 APPP05067 770 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 SYN1P17600 705 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 RASA1P20936 1047 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 TMEM132BQ14DG7 1078 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 LAPTM4AQ15012 233 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 LRRC26Q2I0M4 334 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 TSHZ3Q63HK5 1081 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 TRPV1Q8NER1 839 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 PHOX2BQ99453 314 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 MMP19Q99542 508 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 PRR14Q9BWN1 585 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 NYAP2Q9P242 653 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 NRBP1Q9UHY1 535 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 SYNPO2Q9UMS6 1093 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 ALPK3Q96L96 1907 aa10.37□□□□□ -0.75
HDAC9-220ENST00000461409 COBLO75128 1261 aa10.36□□□□□ -0.75
HDAC9-220ENST00000461409 SLC3A2P08195 630 aaKnown RBP10.36□□□□□ -0.75
HDAC9-220ENST00000461409 STAT3P40763 770 aa10.36□□□□□ -0.75
HDAC9-220ENST00000461409 KCTD2Q14681 263 aa10.36□□□□□ -0.75
HDAC9-220ENST00000461409 FAM83BQ5T0W9 1011 aa10.36□□□□□ -0.75
HDAC9-220ENST00000461409 RIOX2Q8IUF8 465 aa10.36□□□□□ -0.75
HDAC9-220ENST00000461409 TDHQ8IZJ6 230 aa10.36□□□□□ -0.75
HDAC9-220ENST00000461409 ZNF444Q8N0Y2 327 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-220ENST00000461409 MAML3Q96JK9 1138 aa10.36□□□□□ -0.75
HDAC9-220ENST00000461409 LBHD1Q9BQE6 289 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-220ENST00000461409 SLF1Q9BQI6 1058 aa10.36□□□□□ -0.75
HDAC9-220ENST00000461409 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.36□□□□□ -0.75
HDAC9-220ENST00000461409 TEX13BQ9BXU2 312 aa10.36□□□□□ -0.75
HDAC9-220ENST00000461409 UBE2OQ9C0C9 1292 aaKnown RBP10.36□□□□□ -0.75
HDAC9-220ENST00000461409 SENP6Q9GZR1 1112 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-220ENST00000461409 FBXO28Q9NVF7 368 aa10.36□□□□□ -0.75
HDAC9-220ENST00000461409 DIS3Q9Y2L1 958 aaKnown RBP10.36□□□□□ -0.75
HDAC9-220ENST00000461409 RLFQ13129 1914 aa10.36□□□□□ -0.75
HDAC9-220ENST00000461409 PATL2C9JE40 543 aaKnown RBP10.35□□□□□ -0.75
HDAC9-220ENST00000461409 F5H6K3 240 aa10.35□□□□□ -0.75
HDAC9-220ENST00000461409 NDUFB10O96000 172 aa10.35□□□□□ -0.75
HDAC9-220ENST00000461409 CFHP08603 1231 aa10.35□□□□□ -0.75
HDAC9-220ENST00000461409 PDE4BQ07343 736 aa10.35□□□□□ -0.75
HDAC9-220ENST00000461409 KLRC3Q07444 240 aa10.35□□□□□ -0.75
HDAC9-220ENST00000461409 LRIT3Q3SXY7 679 aa10.35□□□□□ -0.75
HDAC9-220ENST00000461409 PRPF38AQ8NAV1 312 aaKnown RBP10.35□□□□□ -0.75
HDAC9-220ENST00000461409 ZNF516Q92618 1163 aa10.35□□□□□ -0.75
HDAC9-220ENST00000461409 FSD1Q9BTV5 496 aa10.35□□□□□ -0.75
HDAC9-220ENST00000461409 PRKAG2Q9UGJ0 569 aa10.35□□□□□ -0.75
HDAC9-220ENST00000461409 ZNF214Q9UL59 606 aaPredicted RBP10.35□□□□□ -0.75
HDAC9-220ENST00000461409 CTDP1Q9Y5B0 961 aaPredicted RBP10.35□□□□□ -0.75
HDAC9-220ENST00000461409 M0R2C6 588 aa10.34□□□□□ -0.75
HDAC9-220ENST00000461409 SOX1O00570 391 aaPredicted RBP10.34□□□□□ -0.75
HDAC9-220ENST00000461409 TTLL1O95922 423 aa10.34□□□□□ -0.75
HDAC9-220ENST00000461409 RARBP10826 455 aa10.34□□□□□ -0.75
HDAC9-220ENST00000461409 MX1P20591 662 aa10.34□□□□□ -0.75
HDAC9-220ENST00000461409 GJC2Q5T442 439 aaPredicted RBP10.34□□□□□ -0.75
HDAC9-220ENST00000461409 SNRNP48Q6IEG0 339 aaKnown RBP10.34□□□□□ -0.75
HDAC9-220ENST00000461409 STK11IPQ8N1F8 1099 aa10.34□□□□□ -0.75
HDAC9-220ENST00000461409 MSL3Q8N5Y2 521 aaKnown RBP10.34□□□□□ -0.75
HDAC9-220ENST00000461409 PI4K2BQ8TCG2 481 aa10.34□□□□□ -0.75
HDAC9-220ENST00000461409 NLRP7Q8WX94 980 aa10.34□□□□□ -0.75
HDAC9-220ENST00000461409 TINF2Q9BSI4 451 aa10.34□□□□□ -0.75
HDAC9-220ENST00000461409 EPB41L4AQ9HCS5 686 aaPredicted RBP10.34□□□□□ -0.75
HDAC9-220ENST00000461409 CLIP2Q9UDT6 1046 aa10.34□□□□□ -0.75
HDAC9-220ENST00000461409 DAXXQ9UER7 740 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms