RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 ACAD9Q9H845 621 aa12.09□□□□□ -0.47
TOP3B-212ENST00000456075 RNF146Q9NTX7 359 aa12.09□□□□□ -0.47
TOP3B-212ENST00000456075 RIPK3Q9Y572 518 aa12.09□□□□□ -0.47
TOP3B-212ENST00000456075 COL11A1P12107 1806 aaPredicted RBP12.09□□□□□ -0.47
TOP3B-212ENST00000456075 DOCK3Q8IZD9 2030 aa12.08□□□□□ -0.48
TOP3B-212ENST00000456075 CCDC69A6NI79 296 aa12.08□□□□□ -0.48
TOP3B-212ENST00000456075 TFRCP02786 760 aaKnown RBP12.08□□□□□ -0.48
TOP3B-212ENST00000456075 ICAM1P05362 532 aa12.08□□□□□ -0.48
TOP3B-212ENST00000456075 PGK2P07205 417 aa12.08□□□□□ -0.48
TOP3B-212ENST00000456075 CNGA1P29973 690 aa12.08□□□□□ -0.48
TOP3B-212ENST00000456075 RGS19P49795 217 aa12.08□□□□□ -0.48
TOP3B-212ENST00000456075 TRIM32Q13049 653 aa12.08□□□□□ -0.48
TOP3B-212ENST00000456075 SEC23AQ15436 765 aa12.08□□□□□ -0.48
TOP3B-212ENST00000456075 OLFML2BQ68BL8 750 aa12.08□□□□□ -0.48
TOP3B-212ENST00000456075 MB21D2Q8IYB1 491 aaPredicted RBP12.08□□□□□ -0.48
TOP3B-212ENST00000456075 TMTC2Q8N394 836 aa12.08□□□□□ -0.48
TOP3B-212ENST00000456075 NPLOC4Q8TAT6 608 aa12.08□□□□□ -0.48
TOP3B-212ENST00000456075 U2AF1L4Q8WU68 220 aaKnown RBP12.08□□□□□ -0.48
TOP3B-212ENST00000456075 TRERF1Q96PN7 1200 aa12.08□□□□□ -0.48
TOP3B-212ENST00000456075 RANBP17Q9H2T7 1088 aaKnown RBP12.08□□□□□ -0.48
TOP3B-212ENST00000456075 BRCA2P51587 3418 aa12.08□□□□□ -0.48
TOP3B-212ENST00000456075 PLXNB2O15031 1838 aa12.08□□□□□ -0.48
TOP3B-212ENST00000456075 COBLO75128 1261 aa12.07□□□□□ -0.48
TOP3B-212ENST00000456075 CAPN2P17655 700 aa12.07□□□□□ -0.48
TOP3B-212ENST00000456075 CYP2C19P33261 490 aa12.07□□□□□ -0.48
TOP3B-212ENST00000456075 GJA8P48165 433 aa12.07□□□□□ -0.48
TOP3B-212ENST00000456075 FGD1P98174 961 aa12.07□□□□□ -0.48
TOP3B-212ENST00000456075 CACNB2Q08289 660 aaPredicted RBP12.07□□□□□ -0.48
TOP3B-212ENST00000456075 NUP133Q8WUM0 1156 aa12.07□□□□□ -0.48
TOP3B-212ENST00000456075 MAML3Q96JK9 1138 aa12.07□□□□□ -0.48
TOP3B-212ENST00000456075 TMEM87BQ96K49 555 aa12.07□□□□□ -0.48
TOP3B-212ENST00000456075 NEK1Q96PY6 1258 aa12.07□□□□□ -0.48
TOP3B-212ENST00000456075 MTA3Q9BTC8 594 aa12.07□□□□□ -0.48
TOP3B-212ENST00000456075 UBA5Q9GZZ9 404 aa12.07□□□□□ -0.48
TOP3B-212ENST00000456075 DIS3Q9Y2L1 958 aaKnown RBP12.07□□□□□ -0.48
TOP3B-212ENST00000456075 KIAA0100Q14667 2235 aaKnown RBP12.07□□□□□ -0.48
TOP3B-212ENST00000456075 PFASO15067 1338 aa12.07□□□□□ -0.48
TOP3B-212ENST00000456075 ZNF236Q9UL36 1845 aa12.07□□□□□ -0.48
TOP3B-212ENST00000456075 KLRF2D3W0D1 207 aa12.06□□□□□ -0.48
TOP3B-212ENST00000456075 POTEB2H3BUK9 544 aa12.06□□□□□ -0.48
TOP3B-212ENST00000456075 EIF5BO60841 1220 aaKnown RBP12.06□□□□□ -0.48
TOP3B-212ENST00000456075 SGPL1O95470 568 aa12.06□□□□□ -0.48
TOP3B-212ENST00000456075 HMGB1P09429 215 aaKnown RBP12.06□□□□□ -0.48
TOP3B-212ENST00000456075 KIF5BP33176 963 aa12.06□□□□□ -0.48
TOP3B-212ENST00000456075 ANTXR2P58335 489 aa12.06□□□□□ -0.48
TOP3B-212ENST00000456075 CDC37Q16543 378 aaPredicted RBP12.06□□□□□ -0.48
TOP3B-212ENST00000456075 MAP3K21Q5TCX8 1036 aa12.06□□□□□ -0.48
TOP3B-212ENST00000456075 NSMFQ6X4W1 530 aa12.06□□□□□ -0.48
TOP3B-212ENST00000456075 SYNE3Q6ZMZ3 975 aa12.06□□□□□ -0.48
TOP3B-212ENST00000456075 CTCFLQ8NI51 663 aaPredicted RBP12.06□□□□□ -0.48
TOP3B-212ENST00000456075 VAT1LQ9HCJ6 419 aa12.06□□□□□ -0.48
TOP3B-212ENST00000456075 PAK6Q9NQU5 681 aaPredicted RBP12.06□□□□□ -0.48
TOP3B-212ENST00000456075 FLRT1Q9NZU1 646 aa12.06□□□□□ -0.48
TOP3B-212ENST00000456075 CNPY2Q9Y2B0 182 aa12.06□□□□□ -0.48
TOP3B-212ENST00000456075 ZNF536O15090 1300 aa12.06□□□□□ -0.48
TOP3B-212ENST00000456075 MSCO60682 206 aa12.05□□□□□ -0.48
TOP3B-212ENST00000456075 DDAH1O94760 285 aa12.05□□□□□ -0.48
TOP3B-212ENST00000456075 ZNF792Q3KQV3 632 aa12.05□□□□□ -0.48
TOP3B-212ENST00000456075 USH1GQ495M9 461 aa12.05□□□□□ -0.48
TOP3B-212ENST00000456075 ADGRF4Q8IZF3 695 aa12.05□□□□□ -0.48
TOP3B-212ENST00000456075 ZNF654Q8IZM8 581 aa12.05□□□□□ -0.48
TOP3B-212ENST00000456075 IGDCC4Q8TDY8 1250 aa12.05□□□□□ -0.48
TOP3B-212ENST00000456075 TINF2Q9BSI4 451 aa12.05□□□□□ -0.48
TOP3B-212ENST00000456075 CPVLQ9H3G5 476 aa12.05□□□□□ -0.48
TOP3B-212ENST00000456075 SLC12A7Q9Y666 1083 aa12.05□□□□□ -0.48
TOP3B-212ENST00000456075 WDR19Q8NEZ3 1342 aa12.05□□□□□ -0.48
TOP3B-212ENST00000456075 PTPDC1A2A3K4 754 aa12.04□□□□□ -0.48
TOP3B-212ENST00000456075 SH2B2O14492 632 aaPredicted RBP12.04□□□□□ -0.48
TOP3B-212ENST00000456075 FARP2O94887 1054 aaPredicted RBP12.04□□□□□ -0.48
TOP3B-212ENST00000456075 CALM1P0DP23 149 aa12.04□□□□□ -0.48
TOP3B-212ENST00000456075 CALM2P0DP24 149 aa12.04□□□□□ -0.48
TOP3B-212ENST00000456075 CALM3P0DP25 149 aa12.04□□□□□ -0.48
TOP3B-212ENST00000456075 CCND3P30281 292 aaPredicted RBP12.04□□□□□ -0.48
TOP3B-212ENST00000456075 LIFRP42702 1097 aa12.04□□□□□ -0.48
TOP3B-212ENST00000456075 TRAF1Q13077 416 aa12.04□□□□□ -0.48
TOP3B-212ENST00000456075 GRM4Q14833 912 aa12.04□□□□□ -0.48
TOP3B-212ENST00000456075 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.04□□□□□ -0.48
TOP3B-212ENST00000456075 DHX32Q7L7V1 743 aaKnown RBP12.04□□□□□ -0.48
TOP3B-212ENST00000456075 HOMER1Q86YM7 354 aa12.04□□□□□ -0.48
TOP3B-212ENST00000456075 STAG2Q8N3U4 1231 aa12.04□□□□□ -0.48
TOP3B-212ENST00000456075 MSL3Q8N5Y2 521 aaKnown RBP12.04□□□□□ -0.48
TOP3B-212ENST00000456075 JAKMIP1Q96N16 626 aaKnown RBP12.04□□□□□ -0.48
TOP3B-212ENST00000456075 LRRC2Q9BYS8 371 aa12.04□□□□□ -0.48
TOP3B-212ENST00000456075 LY9Q9HBG7 655 aa12.04□□□□□ -0.48
TOP3B-212ENST00000456075 SENP2Q9HC62 589 aa12.04□□□□□ -0.48
TOP3B-212ENST00000456075 A1CFQ9NQ94 594 aaKnown RBP12.04□□□□□ -0.48
TOP3B-212ENST00000456075 MAD2L2Q9UI95 211 aa12.04□□□□□ -0.48
TOP3B-212ENST00000456075 RBBP6Q7Z6E9 1792 aaKnown RBP12.04□□□□□ -0.48
TOP3B-212ENST00000456075 DNAJC25-GNG10A0A024R161 153 aa12.03□□□□□ -0.48
TOP3B-212ENST00000456075 PALM3A6NDB9 673 aaPredicted RBP12.03□□□□□ -0.48
TOP3B-212ENST00000456075 EPB41L2O43491 1005 aaKnown RBP12.03□□□□□ -0.48
TOP3B-212ENST00000456075 CYBAP13498 195 aa12.03□□□□□ -0.48
TOP3B-212ENST00000456075 PSMA5P28066 241 aa12.03□□□□□ -0.48
TOP3B-212ENST00000456075 HSPA4P34932 840 aa12.03□□□□□ -0.48
TOP3B-212ENST00000456075 GNAQP50148 359 aa12.03□□□□□ -0.48
TOP3B-212ENST00000456075 TROAPQ12815 778 aa12.03□□□□□ -0.48
TOP3B-212ENST00000456075 TSGA10IPQ3SY00 556 aa12.03□□□□□ -0.48
TOP3B-212ENST00000456075 MUM1L1Q5H9M0 696 aa12.03□□□□□ -0.48
TOP3B-212ENST00000456075 BLOC1S2Q6QNY1 142 aa12.03□□□□□ -0.48
TOP3B-212ENST00000456075 ZNF467Q7Z7K2 595 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms