RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 FRMPD2Q68DX3 1309 aaPredicted RBP19.4■□□□□ 0.7
NCKIPSD-208ENST00000454134 SMCHD1A6NHR9 2005 aa19.39■□□□□ 0.69
NCKIPSD-208ENST00000454134 ZNF865P0CJ78 1059 aaPredicted RBP19.39■□□□□ 0.69
NCKIPSD-208ENST00000454134 PCP11498 1178 aaKnown RBP19.39■□□□□ 0.69
NCKIPSD-208ENST00000454134 LENG1Q96BZ8 264 aaPredicted RBP19.39■□□□□ 0.69
NCKIPSD-208ENST00000454134 FGD4Q96M96 766 aa19.39■□□□□ 0.69
NCKIPSD-208ENST00000454134 ZKSCAN3Q9BRR0 538 aa19.39■□□□□ 0.69
NCKIPSD-208ENST00000454134 RNF41Q9H4P4 317 aaPredicted RBP19.39■□□□□ 0.69
NCKIPSD-208ENST00000454134 GPCPD1Q9NPB8 672 aa19.39■□□□□ 0.69
NCKIPSD-208ENST00000454134 RNF146Q9NTX7 359 aa19.39■□□□□ 0.69
NCKIPSD-208ENST00000454134 NRBP1Q9UHY1 535 aa19.39■□□□□ 0.69
NCKIPSD-208ENST00000454134 CNPY2Q9Y2B0 182 aa19.39■□□□□ 0.69
NCKIPSD-208ENST00000454134 KBTBD13C9JR72 458 aa19.38■□□□□ 0.69
NCKIPSD-208ENST00000454134 SNAI1O95863 264 aaPredicted RBP19.38■□□□□ 0.69
NCKIPSD-208ENST00000454134 ALAS1P13196 640 aa19.38■□□□□ 0.69
NCKIPSD-208ENST00000454134 LRRC41Q15345 812 aa19.38■□□□□ 0.69
NCKIPSD-208ENST00000454134 LAMA4Q16363 1823 aa19.38■□□□□ 0.69
NCKIPSD-208ENST00000454134 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.38■□□□□ 0.69
NCKIPSD-208ENST00000454134 ACAD9Q9H845 621 aa19.38■□□□□ 0.69
NCKIPSD-208ENST00000454134 XPNPEP3Q9NQH7 507 aa19.38■□□□□ 0.69
NCKIPSD-208ENST00000454134 RANBP2P49792 3224 aaKnown RBP19.38■□□□□ 0.69
NCKIPSD-208ENST00000454134 DNAH12Q6ZR08 3092 aa19.37■□□□□ 0.69
NCKIPSD-208ENST00000454134 SYNGAP1Q96PV0 1343 aa19.37■□□□□ 0.69
NCKIPSD-208ENST00000454134 PGK1P00558 417 aa19.37■□□□□ 0.69
NCKIPSD-208ENST00000454134 RARBP10826 455 aa19.37■□□□□ 0.69
NCKIPSD-208ENST00000454134 ADCYAP1R1P41586 468 aa19.37■□□□□ 0.69
NCKIPSD-208ENST00000454134 CNTN2Q02246 1040 aa19.37■□□□□ 0.69
NCKIPSD-208ENST00000454134 MAMDC4Q6UXC1 1216 aa19.37■□□□□ 0.69
NCKIPSD-208ENST00000454134 MSL3Q8N5Y2 521 aaKnown RBP19.37■□□□□ 0.69
NCKIPSD-208ENST00000454134 ESR2Q92731 530 aa19.37■□□□□ 0.69
NCKIPSD-208ENST00000454134 FERMT2Q96AC1 680 aa19.37■□□□□ 0.69
NCKIPSD-208ENST00000454134 TRERF1Q96PN7 1200 aa19.37■□□□□ 0.69
NCKIPSD-208ENST00000454134 GDF15Q99988 308 aa19.37■□□□□ 0.69
NCKIPSD-208ENST00000454134 DSCC1Q9BVC3 393 aa19.37■□□□□ 0.69
NCKIPSD-208ENST00000454134 A1CFQ9NQ94 594 aaKnown RBP19.37■□□□□ 0.69
NCKIPSD-208ENST00000454134 ZHX1Q9UKY1 873 aaPredicted RBP19.37■□□□□ 0.69
NCKIPSD-208ENST00000454134 B4E1Z4 1266 aa19.36■□□□□ 0.69
NCKIPSD-208ENST00000454134 PDHBP11177 359 aa19.36■□□□□ 0.69
NCKIPSD-208ENST00000454134 AKR1A1P14550 325 aa19.36■□□□□ 0.69
NCKIPSD-208ENST00000454134 MAGEA10P43363 369 aaPredicted RBP19.36■□□□□ 0.69
NCKIPSD-208ENST00000454134 MUM1L1Q5H9M0 696 aa19.36■□□□□ 0.69
NCKIPSD-208ENST00000454134 SYDE2Q5VT97 1194 aa19.36■□□□□ 0.69
NCKIPSD-208ENST00000454134 ZNF467Q7Z7K2 595 aaPredicted RBP19.36■□□□□ 0.69
NCKIPSD-208ENST00000454134 TTC14Q96N46 770 aa19.36■□□□□ 0.69
NCKIPSD-208ENST00000454134 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.36■□□□□ 0.69
NCKIPSD-208ENST00000454134 CCPG1Q9ULG6 757 aa19.36■□□□□ 0.69
NCKIPSD-208ENST00000454134 POTEB2H3BUK9 544 aa19.35■□□□□ 0.69
NCKIPSD-208ENST00000454134 KDM4AO75164 1064 aa19.35■□□□□ 0.69
NCKIPSD-208ENST00000454134 RTP1P59025 263 aa19.35■□□□□ 0.69
NCKIPSD-208ENST00000454134 BTNL9Q6UXG8 535 aa19.35■□□□□ 0.69
NCKIPSD-208ENST00000454134 RANBP17Q9H2T7 1088 aaKnown RBP19.35■□□□□ 0.69
NCKIPSD-208ENST00000454134 MCM3APO60318 1980 aa19.35■□□□□ 0.69
NCKIPSD-208ENST00000454134 SOWAHBA6NEL2 793 aa19.34■□□□□ 0.69
NCKIPSD-208ENST00000454134 ACVR2BQ13705 512 aa19.34■□□□□ 0.69
NCKIPSD-208ENST00000454134 IMMTQ16891 758 aaKnown RBP19.34■□□□□ 0.69
NCKIPSD-208ENST00000454134 TKFCQ3LXA3 575 aa19.34■□□□□ 0.69
NCKIPSD-208ENST00000454134 SLC39A5Q6ZMH5 540 aa19.34■□□□□ 0.69
NCKIPSD-208ENST00000454134 ARMCX2Q7L311 632 aa19.34■□□□□ 0.69
NCKIPSD-208ENST00000454134 CCDC144CPQ8IYA2 1237 aa19.34■□□□□ 0.69
NCKIPSD-208ENST00000454134 FAM133AQ8N9E0 248 aa19.34■□□□□ 0.69
NCKIPSD-208ENST00000454134 CTNNA3Q9UI47 895 aa19.34■□□□□ 0.69
NCKIPSD-208ENST00000454134 FAM184BQ9ULE4 1060 aa19.34■□□□□ 0.69
NCKIPSD-208ENST00000454134 ATP11BQ9Y2G3 1177 aa19.34■□□□□ 0.69
NCKIPSD-208ENST00000454134 DDX49Q9Y6V7 483 aaKnown RBP19.34■□□□□ 0.69
NCKIPSD-208ENST00000454134 ICAM1P05362 532 aa19.33■□□□□ 0.68
NCKIPSD-208ENST00000454134 ZNF543Q08ER8 600 aa19.33■□□□□ 0.68
NCKIPSD-208ENST00000454134 RNF180Q86T96 592 aa19.33■□□□□ 0.68
NCKIPSD-208ENST00000454134 ZSWIM5Q9P217 1185 aa19.33■□□□□ 0.68
NCKIPSD-208ENST00000454134 ADCY6O43306 1168 aa19.32■□□□□ 0.68
NCKIPSD-208ENST00000454134 GOLGA8HP0CJ92 632 aa19.32■□□□□ 0.68
NCKIPSD-208ENST00000454134 SNHG28P0DPA3 235 aa19.32■□□□□ 0.68
NCKIPSD-208ENST00000454134 CHMLP26374 656 aa19.32■□□□□ 0.68
NCKIPSD-208ENST00000454134 BMP8BP34820 402 aa19.32■□□□□ 0.68
NCKIPSD-208ENST00000454134 IRX5P78411 483 aaPredicted RBP19.32■□□□□ 0.68
NCKIPSD-208ENST00000454134 MDM2Q00987 491 aaPredicted RBP19.32■□□□□ 0.68
NCKIPSD-208ENST00000454134 CCDC144BQ3MJ40 725 aa19.32■□□□□ 0.68
NCKIPSD-208ENST00000454134 TRIM60Q495X7 471 aa19.32■□□□□ 0.68
NCKIPSD-208ENST00000454134 NSMFQ6X4W1 530 aa19.32■□□□□ 0.68
NCKIPSD-208ENST00000454134 IQCA1Q86XH1 822 aa19.32■□□□□ 0.68
NCKIPSD-208ENST00000454134 DGKHQ86XP1 1220 aa19.32■□□□□ 0.68
NCKIPSD-208ENST00000454134 PURBQ96QR8 312 aaKnown RBP19.32■□□□□ 0.68
NCKIPSD-208ENST00000454134 ABHD16BQ9H3Z7 469 aa19.32■□□□□ 0.68
NCKIPSD-208ENST00000454134 CYP39A1Q9NYL5 469 aa19.32■□□□□ 0.68
NCKIPSD-208ENST00000454134 PHF24Q9UPV7 400 aa19.32■□□□□ 0.68
NCKIPSD-208ENST00000454134 ASTN1O14525 1302 aa19.31■□□□□ 0.68
NCKIPSD-208ENST00000454134 SYNRGQ9UMZ2 1314 aa19.31■□□□□ 0.68
NCKIPSD-208ENST00000454134 A0A1W2PPC1 479 aa19.31■□□□□ 0.68
NCKIPSD-208ENST00000454134 ADAMTS4O75173 837 aa19.31■□□□□ 0.68
NCKIPSD-208ENST00000454134 PNMA1Q8ND90 353 aa19.31■□□□□ 0.68
NCKIPSD-208ENST00000454134 ZSCAN10Q96SZ4 725 aaPredicted RBP19.31■□□□□ 0.68
NCKIPSD-208ENST00000454134 KATNBL1Q9H079 304 aa19.31■□□□□ 0.68
NCKIPSD-208ENST00000454134 CPVLQ9H3G5 476 aa19.31■□□□□ 0.68
NCKIPSD-208ENST00000454134 MYADML2A6NDP7 307 aa19.3■□□□□ 0.68
NCKIPSD-208ENST00000454134 SOX1O00570 391 aaPredicted RBP19.3■□□□□ 0.68
NCKIPSD-208ENST00000454134 NFIBO00712 420 aa19.3■□□□□ 0.68
NCKIPSD-208ENST00000454134 PTH1RQ03431 593 aa19.3■□□□□ 0.68
NCKIPSD-208ENST00000454134 ENAHQ8N8S7 591 aaPredicted RBP19.3■□□□□ 0.68
NCKIPSD-208ENST00000454134 UBE2OQ9C0C9 1292 aaKnown RBP19.3■□□□□ 0.68
NCKIPSD-208ENST00000454134 UBA5Q9GZZ9 404 aa19.3■□□□□ 0.68
NCKIPSD-208ENST00000454134 KAT14Q9H8E8 782 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms