RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 U2AF2P26368 475 aaKnown RBP eCLIP14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 KRT2P35908 639 aa14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 RESTQ13127 1097 aa14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 PABPC4Q13310 644 aaKnown RBP eCLIP14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 ATL3Q6DD88 541 aa14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 PPP1R18Q6NYC8 613 aa14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 GADL1Q6ZQY3 521 aa14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 FERMT3Q86UX7 667 aa14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 DIS3L2Q8IYB7 885 aaKnown RBP14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 BICD2Q8TD16 824 aa14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 GPKOWQ92917 476 aaPredicted RBP eCLIP14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 ZMYND12Q9H0C1 365 aa14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 RANBP17Q9H2T7 1088 aaKnown RBP14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 FBXO28Q9NVF7 368 aa14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 PPP1R9AQ9ULJ8 1098 aa14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 CTDP1Q9Y5B0 961 aaPredicted RBP14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 PCDHA1Q9Y5I3 950 aa14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 PASKQ96RG2 1323 aa14.41□□□□□ -0.1
HLA-DPA1-244ENST00000453337 SMCO2A6NFE2 343 aa14.4□□□□□ -0.1
HLA-DPA1-244ENST00000453337 BTBD18B2RXH4 712 aa14.4□□□□□ -0.1
HLA-DPA1-244ENST00000453337 YY1P25490 414 aa14.4□□□□□ -0.1
HLA-DPA1-244ENST00000453337 HOXA7P31268 230 aaPredicted RBP14.4□□□□□ -0.1
HLA-DPA1-244ENST00000453337 DSG3P32926 999 aa14.4□□□□□ -0.1
HLA-DPA1-244ENST00000453337 GTF2A2P52657 109 aa14.4□□□□□ -0.1
HLA-DPA1-244ENST00000453337 MRPL12P52815 198 aaKnown RBP14.4□□□□□ -0.1
HLA-DPA1-244ENST00000453337 HUNKP57058 714 aa14.4□□□□□ -0.1
HLA-DPA1-244ENST00000453337 KIF23Q02241 960 aaPredicted RBP14.4□□□□□ -0.1
HLA-DPA1-244ENST00000453337 TEX2Q8IWB9 1127 aa14.4□□□□□ -0.1
HLA-DPA1-244ENST00000453337 BLIDQ8IZY5 108 aa14.4□□□□□ -0.1
HLA-DPA1-244ENST00000453337 COA7Q96BR5 231 aa14.4□□□□□ -0.1
HLA-DPA1-244ENST00000453337 WNK4Q96J92 1243 aa14.4□□□□□ -0.1
HLA-DPA1-244ENST00000453337 ZNF396Q96N95 335 aaPredicted RBP14.4□□□□□ -0.1
HLA-DPA1-244ENST00000453337 PCDHA4Q9UN74 947 aa14.4□□□□□ -0.1
HLA-DPA1-244ENST00000453337 MYPNQ86TC9 1320 aa14.4□□□□□ -0.1
HLA-DPA1-244ENST00000453337 SMCHD1A6NHR9 2005 aa14.39□□□□□ -0.11
HLA-DPA1-244ENST00000453337 PARP14Q460N5 1801 aa14.39□□□□□ -0.11
HLA-DPA1-244ENST00000453337 BAG4O95429 457 aaKnown RBP14.39□□□□□ -0.11
HLA-DPA1-244ENST00000453337 ZBTB48P10074 688 aaPredicted RBP14.39□□□□□ -0.11
HLA-DPA1-244ENST00000453337 CETPP11597 493 aa14.39□□□□□ -0.11
HLA-DPA1-244ENST00000453337 FSTL1Q12841 308 aa14.39□□□□□ -0.11
HLA-DPA1-244ENST00000453337 DGKZQ13574 1117 aa14.39□□□□□ -0.11
HLA-DPA1-244ENST00000453337 SPRYD7Q5W111 196 aa14.39□□□□□ -0.11
HLA-DPA1-244ENST00000453337 SAMD1Q6SPF0 538 aaPredicted RBP14.39□□□□□ -0.11
HLA-DPA1-244ENST00000453337 DAGLBQ8NCG7 672 aa14.39□□□□□ -0.11
HLA-DPA1-244ENST00000453337 CFAP45Q9UL16 551 aa14.39□□□□□ -0.11
HLA-DPA1-244ENST00000453337 RLFQ13129 1914 aa14.39□□□□□ -0.11
HLA-DPA1-244ENST00000453337 MYH15Q9Y2K3 1946 aa14.39□□□□□ -0.11
HLA-DPA1-244ENST00000453337 LOC285556D6RIA3 1793 aa14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 GOLGA6L22H0YM25 854 aa14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 PPP1R11O60927 126 aaPredicted RBP14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 OSBPP22059 807 aa14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 GJA5P36382 358 aa14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 ADCY7P51828 1080 aa14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 SNAP25P60880 206 aa14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 KRT85P78386 507 aa14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 MCTP2Q6DN12 878 aa14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 TYW1BQ6NUM6 668 aa14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 NOSTRINQ8IVI9 506 aa14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 SHISA4Q96DD7 197 aa14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 PSTPIP2Q9H939 334 aa14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 SLC38A10Q9HBR0 1119 aa14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 RIC8AQ9NPQ8 531 aa14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 ADAMTS5Q9UNA0 930 aa14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 AGTPBP1Q9UPW5 1226 aa14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 MRPL11Q9Y3B7 192 aaKnown RBP14.38□□□□□ -0.11
HLA-DPA1-244ENST00000453337 VWA5AO00534 786 aa14.37□□□□□ -0.11
HLA-DPA1-244ENST00000453337 ICAM1P05362 532 aa14.37□□□□□ -0.11
HLA-DPA1-244ENST00000453337 ZNF157P51786 506 aaPredicted RBP14.37□□□□□ -0.11
HLA-DPA1-244ENST00000453337 OAZ1P54368 228 aa14.37□□□□□ -0.11
HLA-DPA1-244ENST00000453337 IRX3P78415 501 aaPredicted RBP14.37□□□□□ -0.11
HLA-DPA1-244ENST00000453337 NPY5RQ15761 445 aa14.37□□□□□ -0.11
HLA-DPA1-244ENST00000453337 CSPP1Q1MSJ5 1256 aa14.37□□□□□ -0.11
HLA-DPA1-244ENST00000453337 RGMBQ6NW40 437 aa14.37□□□□□ -0.11
HLA-DPA1-244ENST00000453337 CCDC174Q6PII3 467 aa14.37□□□□□ -0.11
HLA-DPA1-244ENST00000453337 SAPCD2Q86UD0 394 aa14.37□□□□□ -0.11
HLA-DPA1-244ENST00000453337 CUL5Q93034 780 aa14.37□□□□□ -0.11
HLA-DPA1-244ENST00000453337 ABCB11O95342 1321 aa14.37□□□□□ -0.11
HLA-DPA1-244ENST00000453337 COL11A1P12107 1806 aaPredicted RBP14.36□□□□□ -0.11
HLA-DPA1-244ENST00000453337 TMEM88BA6NKF7 163 aa14.36□□□□□ -0.11
HLA-DPA1-244ENST00000453337 KIF28PB7ZC32 967 aa14.36□□□□□ -0.11
HLA-DPA1-244ENST00000453337 DNM1Q05193 864 aaKnown RBP14.36□□□□□ -0.11
HLA-DPA1-244ENST00000453337 NR5A1Q13285 461 aa14.36□□□□□ -0.11
HLA-DPA1-244ENST00000453337 FOXD4L6Q3SYB3 417 aaPredicted RBP14.36□□□□□ -0.11
HLA-DPA1-244ENST00000453337 USH1GQ495M9 461 aa14.36□□□□□ -0.11
HLA-DPA1-244ENST00000453337 RILPL1Q5EBL4 403 aa14.36□□□□□ -0.11
HLA-DPA1-244ENST00000453337 TREML2Q5T2D2 321 aa14.36□□□□□ -0.11
HLA-DPA1-244ENST00000453337 FOXD4L3Q6VB84 417 aaPredicted RBP14.36□□□□□ -0.11
HLA-DPA1-244ENST00000453337 SAMD3Q8N6K7 520 aa14.36□□□□□ -0.11
HLA-DPA1-244ENST00000453337 MB21D1Q8N884 522 aa14.36□□□□□ -0.11
HLA-DPA1-244ENST00000453337 OXER1Q8TDS5 423 aa14.36□□□□□ -0.11
HLA-DPA1-244ENST00000453337 ATG4CQ96DT6 458 aa14.36□□□□□ -0.11
HLA-DPA1-244ENST00000453337 NOL7Q9UMY1 257 aaKnown RBP14.36□□□□□ -0.11
HLA-DPA1-244ENST00000453337 SLC45A1Q9Y2W3 748 aa14.36□□□□□ -0.11
HLA-DPA1-244ENST00000453337 TLL2Q9Y6L7 1015 aa14.36□□□□□ -0.11
HLA-DPA1-244ENST00000453337 CCDC194A0A1B0GVG4 234 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 M0R2N6 131 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 ATP2A1O14983 1001 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 NCLP19338 710 aaKnown RBP14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 PTMSP20962 102 aa14.35□□□□□ -0.11
HLA-DPA1-244ENST00000453337 MCM4P33991 863 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms