RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 IFIT3O14879 490 aaKnown RBP29.27■■■□□ 2.28
UFD1-204ENST00000447868 CCND3P30281 292 aaPredicted RBP29.27■■■□□ 2.28
UFD1-204ENST00000447868 PLXNA1Q9UIW2 1896 aa29.26■■■□□ 2.27
UFD1-204ENST00000447868 TFRCP02786 760 aaKnown RBP29.26■■■□□ 2.27
UFD1-204ENST00000447868 NECTIN1Q15223 517 aa29.26■■■□□ 2.27
UFD1-204ENST00000447868 OLFML2BQ68BL8 750 aa29.26■■■□□ 2.27
UFD1-204ENST00000447868 CHST13Q8NET6 341 aa29.26■■■□□ 2.27
UFD1-204ENST00000447868 DDX11Q96FC9 970 aa29.26■■■□□ 2.27
UFD1-204ENST00000447868 MAML3Q96JK9 1138 aa29.26■■■□□ 2.27
UFD1-204ENST00000447868 RANBP17Q9H2T7 1088 aaKnown RBP29.26■■■□□ 2.27
UFD1-204ENST00000447868 FBXO40Q9UH90 709 aa29.26■■■□□ 2.27
UFD1-204ENST00000447868 ERICH2A1L162 156 aa29.25■■■□□ 2.27
UFD1-204ENST00000447868 ALAS1P13196 640 aa29.25■■■□□ 2.27
UFD1-204ENST00000447868 TAL1P17542 331 aaPredicted RBP29.25■■■□□ 2.27
UFD1-204ENST00000447868 GPATCH4Q5T3I0 446 aaKnown RBP29.25■■■□□ 2.27
UFD1-204ENST00000447868 MB21D2Q8IYB1 491 aaPredicted RBP29.25■■■□□ 2.27
UFD1-204ENST00000447868 ANKRD35Q8N283 1001 aa29.25■■■□□ 2.27
UFD1-204ENST00000447868 CPVLQ9H3G5 476 aa29.25■■■□□ 2.27
UFD1-204ENST00000447868 RNF146Q9NTX7 359 aa29.25■■■□□ 2.27
UFD1-204ENST00000447868 CCPG1Q9ULG6 757 aa29.25■■■□□ 2.27
UFD1-204ENST00000447868 ANTXR2P58335 489 aa29.24■■■□□ 2.27
UFD1-204ENST00000447868 ZNF792Q3KQV3 632 aa29.24■■■□□ 2.27
UFD1-204ENST00000447868 TRERF1Q96PN7 1200 aa29.24■■■□□ 2.27
UFD1-204ENST00000447868 UBA5Q9GZZ9 404 aa29.24■■■□□ 2.27
UFD1-204ENST00000447868 ACAD9Q9H845 621 aa29.24■■■□□ 2.27
UFD1-204ENST00000447868 PARP1P09874 1014 aaKnown RBP29.23■■■□□ 2.27
UFD1-204ENST00000447868 WTAPQ15007 396 aa29.23■■■□□ 2.27
UFD1-204ENST00000447868 SART3Q15020 963 aaKnown RBP29.23■■■□□ 2.27
UFD1-204ENST00000447868 SENP2Q9HC62 589 aa29.23■■■□□ 2.27
UFD1-204ENST00000447868 IGHA2P01877 340 aa29.22■■■□□ 2.27
UFD1-204ENST00000447868 ICAM1P05362 532 aa29.22■■■□□ 2.27
UFD1-204ENST00000447868 CNGA1P29973 690 aa29.22■■■□□ 2.27
UFD1-204ENST00000447868 TKFCQ3LXA3 575 aa29.22■■■□□ 2.27
UFD1-204ENST00000447868 ASPRV1Q53RT3 343 aa29.22■■■□□ 2.27
UFD1-204ENST00000447868 TMEM67Q5HYA8 995 aa29.22■■■□□ 2.27
UFD1-204ENST00000447868 CRISPLD2Q9H0B8 497 aa29.22■■■□□ 2.27
UFD1-204ENST00000447868 RNF20Q5VTR2 975 aa29.21■■■□□ 2.27
UFD1-204ENST00000447868 TRPV1Q8NER1 839 aa29.21■■■□□ 2.27
UFD1-204ENST00000447868 DIS3Q9Y2L1 958 aaKnown RBP29.21■■■□□ 2.27
UFD1-204ENST00000447868 SMCHD1A6NHR9 2005 aa29.21■■■□□ 2.27
UFD1-204ENST00000447868 MUM1L1Q5H9M0 696 aa29.2■■■□□ 2.26
UFD1-204ENST00000447868 PRAMEF19Q5SWL8 479 aa29.2■■■□□ 2.26
UFD1-204ENST00000447868 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.2■■■□□ 2.26
UFD1-204ENST00000447868 TNRC18O15417 2968 aaPredicted RBP29.2■■■□□ 2.26
UFD1-204ENST00000447868 MKI67P46013 3256 aaKnown RBP29.19■■■□□ 2.26
UFD1-204ENST00000447868 DNAJC25-GNG10A0A024R161 153 aa29.19■■■□□ 2.26
UFD1-204ENST00000447868 PRC1O43663 620 aa29.19■■■□□ 2.26
UFD1-204ENST00000447868 FARP2O94887 1054 aaPredicted RBP29.19■■■□□ 2.26
UFD1-204ENST00000447868 CYBAP13498 195 aa29.19■■■□□ 2.26
UFD1-204ENST00000447868 IGDCC4Q8TDY8 1250 aa29.19■■■□□ 2.26
UFD1-204ENST00000447868 A1CFQ9NQ94 594 aaKnown RBP29.19■■■□□ 2.26
UFD1-204ENST00000447868 DHX16O60231 1041 aaKnown RBP29.18■■■□□ 2.26
UFD1-204ENST00000447868 MCM5P33992 734 aa29.18■■■□□ 2.26
UFD1-204ENST00000447868 COL9A3Q14050 684 aaPredicted RBP29.18■■■□□ 2.26
UFD1-204ENST00000447868 STAG2Q8N3U4 1231 aa29.18■■■□□ 2.26
UFD1-204ENST00000447868 TINF2Q9BSI4 451 aa29.18■■■□□ 2.26
UFD1-204ENST00000447868 GPHNQ9NQX3 736 aaPredicted RBP29.18■■■□□ 2.26
UFD1-204ENST00000447868 ADGRF4Q8IZF3 695 aa29.17■■■□□ 2.26
UFD1-204ENST00000447868 VAT1LQ9HCJ6 419 aa29.17■■■□□ 2.26
UFD1-204ENST00000447868 CDC37Q16543 378 aaPredicted RBP29.16■■■□□ 2.26
UFD1-204ENST00000447868 NSMFQ6X4W1 530 aa29.16■■■□□ 2.26
UFD1-204ENST00000447868 LY9Q9HBG7 655 aa29.16■■■□□ 2.26
UFD1-204ENST00000447868 POTEB2H3BUK9 544 aa29.15■■■□□ 2.26
UFD1-204ENST00000447868 CAPN2P17655 700 aa29.15■■■□□ 2.26
UFD1-204ENST00000447868 CNTN2Q02246 1040 aa29.15■■■□□ 2.26
UFD1-204ENST00000447868 LHX8Q68G74 356 aa29.15■■■□□ 2.26
UFD1-204ENST00000447868 CATIPQ7Z7H3 387 aa29.15■■■□□ 2.26
UFD1-204ENST00000447868 RASEFQ8IZ41 740 aa29.15■■■□□ 2.26
UFD1-204ENST00000447868 DDX20Q9UHI6 824 aaKnown RBP29.15■■■□□ 2.26
UFD1-204ENST00000447868 MAD2L2Q9UI95 211 aa29.15■■■□□ 2.26
UFD1-204ENST00000447868 OGDHLQ9ULD0 1010 aa29.15■■■□□ 2.26
UFD1-204ENST00000447868 PFASO15067 1338 aa29.15■■■□□ 2.26
UFD1-204ENST00000447868 KLRF2D3W0D1 207 aa29.14■■■□□ 2.26
UFD1-204ENST00000447868 GRM4Q14833 912 aa29.14■■■□□ 2.26
UFD1-204ENST00000447868 USH1GQ495M9 461 aa29.14■■■□□ 2.26
UFD1-204ENST00000447868 UBE2Q1Q7Z7E8 422 aa29.14■■■□□ 2.26
UFD1-204ENST00000447868 DIS3LQ8TF46 1054 aaKnown RBP29.14■■■□□ 2.26
UFD1-204ENST00000447868 LRRC2Q9BYS8 371 aa29.14■■■□□ 2.26
UFD1-204ENST00000447868 FRMPD3Q5JV73 1810 aa29.13■■■□□ 2.25
UFD1-204ENST00000447868 NFIBO00712 420 aa29.13■■■□□ 2.25
UFD1-204ENST00000447868 SH2B2O14492 632 aaPredicted RBP29.13■■■□□ 2.25
UFD1-204ENST00000447868 ANO1Q5XXA6 986 aa29.13■■■□□ 2.25
UFD1-204ENST00000447868 NFXL1Q6ZNB6 911 aa29.13■■■□□ 2.25
UFD1-204ENST00000447868 NUP133Q8WUM0 1156 aa29.13■■■□□ 2.25
UFD1-204ENST00000447868 TMEM87BQ96K49 555 aa29.13■■■□□ 2.25
UFD1-204ENST00000447868 FGD4Q96M96 766 aa29.13■■■□□ 2.25
UFD1-204ENST00000447868 NEK1Q96PY6 1258 aa29.13■■■□□ 2.25
UFD1-204ENST00000447868 JMJD4Q9H9V9 463 aa29.13■■■□□ 2.25
UFD1-204ENST00000447868 CYP39A1Q9NYL5 469 aa29.13■■■□□ 2.25
UFD1-204ENST00000447868 PNMA2Q9UL42 364 aa29.13■■■□□ 2.25
UFD1-204ENST00000447868 WDR19Q8NEZ3 1342 aa29.13■■■□□ 2.25
UFD1-204ENST00000447868 PALM3A6NDB9 673 aaPredicted RBP29.12■■■□□ 2.25
UFD1-204ENST00000447868 TROAPQ12815 778 aa29.12■■■□□ 2.25
UFD1-204ENST00000447868 ZNF467Q7Z7K2 595 aaPredicted RBP29.12■■■□□ 2.25
UFD1-204ENST00000447868 MSL3Q8N5Y2 521 aaKnown RBP29.12■■■□□ 2.25
UFD1-204ENST00000447868 FAM133AQ8N9E0 248 aa29.12■■■□□ 2.25
UFD1-204ENST00000447868 ANKLE1Q8NAG6 615 aa29.12■■■□□ 2.25
UFD1-204ENST00000447868 PAWRQ96IZ0 340 aaKnown RBP29.12■■■□□ 2.25
UFD1-204ENST00000447868 MTA3Q9BTC8 594 aa29.12■■■□□ 2.25
UFD1-204ENST00000447868 CNPY2Q9Y2B0 182 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms