RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 KANSL2Q9H9L4 492 aa29.19■■■□□ 2.26
CPNE1-216ENST00000437340 NYAP2Q9P242 653 aa29.19■■■□□ 2.26
CPNE1-216ENST00000437340 PRPHP41219 470 aa29.18■■■□□ 2.26
CPNE1-216ENST00000437340 PRELPP51888 382 aa29.18■■■□□ 2.26
CPNE1-216ENST00000437340 PAGE5Q96GU1 130 aa29.18■■■□□ 2.26
CPNE1-216ENST00000437340 TXLNAP40222 546 aa29.18■■■□□ 2.26
CPNE1-216ENST00000437340 E2F4Q16254 413 aa29.18■■■□□ 2.26
CPNE1-216ENST00000437340 RSBN1LQ6PCB5 846 aaPredicted RBP29.18■■■□□ 2.26
CPNE1-216ENST00000437340 DTHD1Q6ZMT9 781 aa29.18■■■□□ 2.26
CPNE1-216ENST00000437340 SYT17Q9BSW7 474 aa29.18■■■□□ 2.26
CPNE1-216ENST00000437340 PNMA6FA0A0J9YX94 578 aa29.17■■■□□ 2.26
CPNE1-216ENST00000437340 VIL1P09327 827 aaKnown RBP29.17■■■□□ 2.26
CPNE1-216ENST00000437340 TDRD3Q9H7E2 651 aaKnown RBP29.17■■■□□ 2.26
CPNE1-216ENST00000437340 GPCPD1Q9NPB8 672 aa29.17■■■□□ 2.26
CPNE1-216ENST00000437340 GRAMD1CQ8IYS0 662 aa29.16■■■□□ 2.26
CPNE1-216ENST00000437340 REXO1Q8N1G1 1221 aaKnown RBP29.16■■■□□ 2.26
CPNE1-216ENST00000437340 JDP2Q8WYK2 163 aa29.16■■■□□ 2.26
CPNE1-216ENST00000437340 NRBP1Q9UHY1 535 aa29.16■■■□□ 2.26
CPNE1-216ENST00000437340 TMEM179Q6ZVK1 233 aa29.16■■■□□ 2.26
CPNE1-216ENST00000437340 KIAA1524Q8TCG1 905 aa29.16■■■□□ 2.26
CPNE1-216ENST00000437340 PRMT6Q96LA8 375 aaPredicted RBP29.16■■■□□ 2.26
CPNE1-216ENST00000437340 GSDMAQ96QA5 445 aa29.16■■■□□ 2.26
CPNE1-216ENST00000437340 HSD3B7Q9H2F3 369 aa29.16■■■□□ 2.26
CPNE1-216ENST00000437340 JMJD4Q9H9V9 463 aa29.16■■■□□ 2.26
CPNE1-216ENST00000437340 DICER1Q9UPY3 1922 aaKnown RBP29.15■■■□□ 2.26
CPNE1-216ENST00000437340 SBF1O95248 1867 aa29.15■■■□□ 2.26
CPNE1-216ENST00000437340 NEMFO60524 1076 aa29.15■■■□□ 2.26
CPNE1-216ENST00000437340 NEK8Q86SG6 692 aa29.15■■■□□ 2.26
CPNE1-216ENST00000437340 ADGRF4Q8IZF3 695 aa29.15■■■□□ 2.26
CPNE1-216ENST00000437340 DCAF4Q8WV16 495 aa29.15■■■□□ 2.26
CPNE1-216ENST00000437340 MTMR8Q96EF0 704 aa29.15■■■□□ 2.26
CPNE1-216ENST00000437340 ATP2B2Q01814 1243 aa29.14■■■□□ 2.26
CPNE1-216ENST00000437340 CXCL9Q07325 125 aa29.14■■■□□ 2.26
CPNE1-216ENST00000437340 DPYDQ12882 1025 aa29.14■■■□□ 2.26
CPNE1-216ENST00000437340 NOLC1Q14978 699 aaKnown RBP eCLIP29.14■■■□□ 2.263e-8■□□□□ 8.2
CPNE1-216ENST00000437340 GMLQ99445 158 aa29.14■■■□□ 2.26
CPNE1-216ENST00000437340 SPTLC3Q9NUV7 552 aa29.14■■■□□ 2.26
CPNE1-216ENST00000437340 MYH4Q9Y623 1939 aa29.14■■■□□ 2.25
CPNE1-216ENST00000437340 ADCY7P51828 1080 aa29.13■■■□□ 2.25
CPNE1-216ENST00000437340 CCDC96Q2M329 555 aa29.13■■■□□ 2.25
CPNE1-216ENST00000437340 TMEM60Q9H2L4 133 aa29.13■■■□□ 2.25
CPNE1-216ENST00000437340 IMPACTQ9P2X3 320 aa29.13■■■□□ 2.25
CPNE1-216ENST00000437340 HDAC9Q9UKV0 1011 aa29.13■■■□□ 2.25
CPNE1-216ENST00000437340 ZBTB12Q9Y330 459 aaPredicted RBP29.13■■■□□ 2.25
CPNE1-216ENST00000437340 EEF2P13639 858 aaKnown RBP29.13■■■□□ 2.25
CPNE1-216ENST00000437340 AFMP43652 599 aa29.13■■■□□ 2.25
CPNE1-216ENST00000437340 CCDC144BQ3MJ40 725 aa29.13■■■□□ 2.25
CPNE1-216ENST00000437340 PDXDC2PQ6P474 469 aa29.13■■■□□ 2.25
CPNE1-216ENST00000437340 ENOX1Q8TC92 643 aaKnown RBP29.13■■■□□ 2.25
CPNE1-216ENST00000437340 TMOD2Q9NZR1 351 aa29.13■■■□□ 2.25
CPNE1-216ENST00000437340 ERCC5P28715 1186 aaPredicted RBP29.12■■■□□ 2.25
CPNE1-216ENST00000437340 LMOD1P29536 600 aaPredicted RBP29.12■■■□□ 2.25
CPNE1-216ENST00000437340 AK8Q96MA6 479 aa29.12■■■□□ 2.25
CPNE1-216ENST00000437340 IFNKQ9P0W0 207 aa29.12■■■□□ 2.25
CPNE1-216ENST00000437340 SPDYE2BA6NHP3 402 aa29.11■■■□□ 2.25
CPNE1-216ENST00000437340 ZBTB5O15062 677 aa29.11■■■□□ 2.25
CPNE1-216ENST00000437340 SPDYE6P0CI01 402 aa29.11■■■□□ 2.25
CPNE1-216ENST00000437340 SLURP2P0DP57 97 aa29.11■■■□□ 2.25
CPNE1-216ENST00000437340 FANCCQ00597 558 aa29.11■■■□□ 2.25
CPNE1-216ENST00000437340 XPO4Q9C0E2 1151 aaKnown RBP29.11■■■□□ 2.25
CPNE1-216ENST00000437340 CCSER1Q9C0I3 900 aa29.11■■■□□ 2.25
CPNE1-216ENST00000437340 UTRNP46939 3433 aa29.11■■■□□ 2.25
CPNE1-216ENST00000437340 FAM196BA6NMK8 535 aa29.11■■■□□ 2.25
CPNE1-216ENST00000437340 CBFA2T2O43439 604 aa29.11■■■□□ 2.25
CPNE1-216ENST00000437340 GSDMDP57764 484 aa29.11■■■□□ 2.25
CPNE1-216ENST00000437340 DHX8Q14562 1220 aaKnown RBP29.11■■■□□ 2.25
CPNE1-216ENST00000437340 ABCB5Q2M3G0 1257 aa29.11■■■□□ 2.25
CPNE1-216ENST00000437340 CIAPIN1Q6FI81 312 aa29.11■■■□□ 2.25
CPNE1-216ENST00000437340 TBCKQ8TEA7 893 aa29.11■■■□□ 2.25
CPNE1-216ENST00000437340 COA7Q96BR5 231 aa29.11■■■□□ 2.25
CPNE1-216ENST00000437340 RIC8AQ9NPQ8 531 aa29.11■■■□□ 2.25
CPNE1-216ENST00000437340 PYCARDQ9ULZ3 195 aa29.11■■■□□ 2.25
CPNE1-216ENST00000437340 SRCAPQ6ZRS2 3230 aa29.1■■■□□ 2.25
CPNE1-216ENST00000437340 CCNT1O60563 726 aaKnown RBP29.1■■■□□ 2.25
CPNE1-216ENST00000437340 OR52Z1P0C646 297 aa29.1■■■□□ 2.25
CPNE1-216ENST00000437340 ICA1Q05084 483 aa29.1■■■□□ 2.25
CPNE1-216ENST00000437340 LETM2Q2VYF4 491 aa29.1■■■□□ 2.25
CPNE1-216ENST00000437340 TTBK2Q6IQ55 1244 aa29.1■■■□□ 2.25
CPNE1-216ENST00000437340 BIN2Q9UBW5 565 aaPredicted RBP29.1■■■□□ 2.25
CPNE1-216ENST00000437340 HERC5Q9UII4 1024 aaKnown RBP29.1■■■□□ 2.25
CPNE1-216ENST00000437340 GTPBP6O43824 516 aaPredicted RBP29.09■■■□□ 2.25
CPNE1-216ENST00000437340 ARHGAP27Q6ZUM4 889 aa29.09■■■□□ 2.25
CPNE1-216ENST00000437340 OGFOD1Q8N543 542 aa29.09■■■□□ 2.25
CPNE1-216ENST00000437340 DISC1Q9NRI5 854 aa29.09■■■□□ 2.25
CPNE1-216ENST00000437340 SYNPO2Q9UMS6 1093 aa29.09■■■□□ 2.25
CPNE1-216ENST00000437340 SLC1A4P43007 532 aa29.08■■■□□ 2.25
CPNE1-216ENST00000437340 SEPT2Q15019 361 aa29.08■■■□□ 2.25
CPNE1-216ENST00000437340 JAKMIP3Q5VZ66 844 aa29.08■■■□□ 2.25
CPNE1-216ENST00000437340 SLFN13Q68D06 897 aa29.08■■■□□ 2.25
CPNE1-216ENST00000437340 KCTD1Q719H9 257 aa29.08■■■□□ 2.25
CPNE1-216ENST00000437340 LRRC8AQ8IWT6 810 aa29.08■■■□□ 2.25
CPNE1-216ENST00000437340 GMCL1P1Q8NEA9 526 aa29.08■■■□□ 2.25
CPNE1-216ENST00000437340 CACTINQ8WUQ7 758 aaKnown RBP29.08■■■□□ 2.25
CPNE1-216ENST00000437340 DLGAP5Q15398 846 aa29.08■■■□□ 2.25
CPNE1-216ENST00000437340 SIAH1Q8IUQ4 282 aa29.08■■■□□ 2.25
CPNE1-216ENST00000437340 AGBL3Q8NEM8 1001 aa29.08■■■□□ 2.25
CPNE1-216ENST00000437340 CSRNP1Q96S65 589 aa29.08■■■□□ 2.25
CPNE1-216ENST00000437340 GLT8D2Q9H1C3 349 aa29.08■■■□□ 2.25
CPNE1-216ENST00000437340 FANCLQ9NW38 375 aa29.08■■■□□ 2.25
CPNE1-216ENST00000437340 ATP1A3P13637 1013 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms