RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 IDH3AP50213 366 aa7.02□□□□□ -1.29
VRK2-206ENST00000435505 ZNF280AP59817 542 aaPredicted RBP7.02□□□□□ -1.29
VRK2-206ENST00000435505 ZBED6P86452 979 aa7.02□□□□□ -1.29
VRK2-206ENST00000435505 CCDC96Q2M329 555 aa7.02□□□□□ -1.29
VRK2-206ENST00000435505 ERCC6LQ2NKX8 1250 aa7.02□□□□□ -1.29
VRK2-206ENST00000435505 ATP13A4Q4VNC1 1196 aa7.02□□□□□ -1.29
VRK2-206ENST00000435505 HGSNATQ68CP4 663 aa7.02□□□□□ -1.29
VRK2-206ENST00000435505 PDE12Q6L8Q7 609 aaKnown RBP7.02□□□□□ -1.29
VRK2-206ENST00000435505 DTHD1Q6ZMT9 781 aa7.02□□□□□ -1.29
VRK2-206ENST00000435505 MMS22LQ6ZRQ5 1243 aa7.02□□□□□ -1.29
VRK2-206ENST00000435505 SV2BQ7L1I2 683 aa7.02□□□□□ -1.29
VRK2-206ENST00000435505 REC114Q7Z4M0 266 aa7.02□□□□□ -1.29
VRK2-206ENST00000435505 REXO1L1PQ8IX06 675 aa7.02□□□□□ -1.29
VRK2-206ENST00000435505 CBARPQ8N350 705 aaPredicted RBP7.02□□□□□ -1.29
VRK2-206ENST00000435505 IQUBQ8NA54 791 aa7.02□□□□□ -1.29
VRK2-206ENST00000435505 DDX1Q92499 740 aaKnown RBP7.02□□□□□ -1.29
VRK2-206ENST00000435505 GJA10Q969M2 543 aa7.02□□□□□ -1.29
VRK2-206ENST00000435505 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.02□□□□□ -1.29
VRK2-206ENST00000435505 ZCCHC17Q9NP64 241 aaKnown RBP7.02□□□□□ -1.29
VRK2-206ENST00000435505 FRMD4BQ9Y2L6 1034 aa7.02□□□□□ -1.29
VRK2-206ENST00000435505 RTCBQ9Y3I0 505 aaKnown RBP7.02□□□□□ -1.29
VRK2-206ENST00000435505 HRH3Q9Y5N1 445 aa7.02□□□□□ -1.29
VRK2-206ENST00000435505 MYO5CQ9NQX4 1742 aa7.02□□□□□ -1.29
VRK2-206ENST00000435505 ZNF644Q9H582 1327 aaPredicted RBP7.02□□□□□ -1.29
VRK2-206ENST00000435505 FAM86C2PA6NEL3 165 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 EIF3CLB5ME19 914 aaKnown RBP7.01□□□□□ -1.29
VRK2-206ENST00000435505 MAP3K6O95382 1288 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 GSPT1P15170 499 aaKnown RBP7.01□□□□□ -1.29
VRK2-206ENST00000435505 MX1P20591 662 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 CASP2P42575 452 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 GPS2Q13227 327 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 EEPD1Q7L9B9 569 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 ANKRD20A12PQ8NF67 263 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 POF1BQ8WVV4 589 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 GATAD2BQ8WXI9 593 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 CAMKK2Q96RR4 588 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 EIF3CQ99613 913 aaKnown RBP7.01□□□□□ -1.29
VRK2-206ENST00000435505 LGR4Q9BXB1 951 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 UBXN6Q9BZV1 441 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 VTA1Q9NP79 307 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.01□□□□□ -1.29
VRK2-206ENST00000435505 SALL4Q9UJQ4 1053 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 DDX19BQ9UMR2 479 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 RNF17Q9BXT8 1623 aaKnown RBP7.01□□□□□ -1.29
VRK2-206ENST00000435505 KANK1Q14678 1352 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 AATKQ6ZMQ8 1374 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 PLD2O14939 933 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 SEC31AO94979 1220 aaKnown RBP7.01□□□□□ -1.29
VRK2-206ENST00000435505 FSHRP23945 695 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 LMAN1P49257 510 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 TMF1P82094 1093 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 PUM3Q15397 648 aaKnown RBP7.01□□□□□ -1.29
VRK2-206ENST00000435505 FOXR1Q6PIV2 292 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 NYAP1Q6ZVC0 841 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 C7orf43Q8WVR3 580 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 NELL2Q99435 816 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 NAA15Q9BXJ9 866 aaKnown RBP7.01□□□□□ -1.29
VRK2-206ENST00000435505 ARHGEF4Q9NR80 690 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 SAP30BPQ9UHR5 308 aaKnown RBP7.01□□□□□ -1.29
VRK2-206ENST00000435505 DGKBQ9Y6T7 804 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 FRMPD2Q68DX3 1309 aaPredicted RBP7.01□□□□□ -1.29
VRK2-206ENST00000435505 CCDC171Q6TFL3 1326 aa7.01□□□□□ -1.29
VRK2-206ENST00000435505 PBRM1Q86U86 1689 aa7□□□□□ -1.29
VRK2-206ENST00000435505 RPLP1P05386 114 aaKnown RBP7□□□□□ -1.29
VRK2-206ENST00000435505 ZNF165P49910 485 aa7□□□□□ -1.29
VRK2-206ENST00000435505 CWF19L2Q2TBE0 894 aaKnown RBP7□□□□□ -1.29
VRK2-206ENST00000435505 ARHGAP29Q52LW3 1261 aa7□□□□□ -1.29
VRK2-206ENST00000435505 ANKRD45Q5TZF3 282 aa7□□□□□ -1.29
VRK2-206ENST00000435505 CXorf57Q6NSI4 855 aaKnown RBP7□□□□□ -1.29
VRK2-206ENST00000435505 RPAINQ86UA6 219 aa7□□□□□ -1.29
VRK2-206ENST00000435505 TMEM57Q8N5G2 664 aa7□□□□□ -1.29
VRK2-206ENST00000435505 NELL1Q92832 810 aa7□□□□□ -1.29
VRK2-206ENST00000435505 XAGE2Q96GT9 111 aa7□□□□□ -1.29
VRK2-206ENST00000435505 ZSCAN16Q9H4T2 348 aaPredicted RBP7□□□□□ -1.29
VRK2-206ENST00000435505 IFT122Q9HBG6 1241 aa7□□□□□ -1.29
VRK2-206ENST00000435505 ZBTB40Q9NUA8 1239 aa7□□□□□ -1.29
VRK2-206ENST00000435505 SPAG9O60271 1321 aaKnown RBP7□□□□□ -1.29
VRK2-206ENST00000435505 LTBP3Q9NS15 1303 aa7□□□□□ -1.29
VRK2-206ENST00000435505 RPAP1Q9BWH6 1393 aaPredicted RBP7□□□□□ -1.29
VRK2-206ENST00000435505 ADCY10Q96PN6 1610 aa7□□□□□ -1.29
VRK2-206ENST00000435505 CUL7Q14999 1698 aa7□□□□□ -1.29
VRK2-206ENST00000435505 ANO9A1A5B4 782 aa7□□□□□ -1.29
VRK2-206ENST00000435505 ANKRD65E5RJM6 399 aa7□□□□□ -1.29
VRK2-206ENST00000435505 TRPA1O75762 1119 aa7□□□□□ -1.29
VRK2-206ENST00000435505 SASH3O75995 380 aa7□□□□□ -1.29
VRK2-206ENST00000435505 MT-CO1P00395 513 aa7□□□□□ -1.29
VRK2-206ENST00000435505 ASGR2P07307 311 aa7□□□□□ -1.29
VRK2-206ENST00000435505 TGFB3P10600 412 aa7□□□□□ -1.29
VRK2-206ENST00000435505 ACPPP15309 386 aa7□□□□□ -1.29
VRK2-206ENST00000435505 SCP2P22307 547 aa7□□□□□ -1.29
VRK2-206ENST00000435505 ARID5BQ14865 1188 aa7□□□□□ -1.29
VRK2-206ENST00000435505 ODF1Q14990 250 aa7□□□□□ -1.29
VRK2-206ENST00000435505 HYIQ5T013 277 aa7□□□□□ -1.29
VRK2-206ENST00000435505 JAKMIP3Q5VZ66 844 aa7□□□□□ -1.29
VRK2-206ENST00000435505 PPP4R3AQ6IN85 833 aa7□□□□□ -1.29
VRK2-206ENST00000435505 CFAP161Q6P656 301 aa7□□□□□ -1.29
VRK2-206ENST00000435505 IGF2-ASQ6U949 168 aa7□□□□□ -1.29
VRK2-206ENST00000435505 SPATS2Q86XZ4 545 aaKnown RBP7□□□□□ -1.29
VRK2-206ENST00000435505 CACTINQ8WUQ7 758 aaKnown RBP7□□□□□ -1.29
VRK2-206ENST00000435505 CLIP3Q96DZ5 547 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms