RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 TRIM45Q9H8W5 580 aaPredicted RBP6.28□□□□□ -1.4
HERC4-206ENST00000427635 C1orf112Q9NSG2 853 aa6.28□□□□□ -1.4
HERC4-206ENST00000427635 MAP3K20Q9NYL2 800 aaKnown RBP6.28□□□□□ -1.4
HERC4-206ENST00000427635 CTTNBP2NLQ9P2B4 639 aa6.28□□□□□ -1.4
HERC4-206ENST00000427635 ARIH1Q9Y4X5 557 aaPredicted RBP6.28□□□□□ -1.4
HERC4-206ENST00000427635 KDRP35968 1356 aa6.28□□□□□ -1.4
HERC4-206ENST00000427635 NOP14P78316 857 aaKnown RBP6.28□□□□□ -1.4
HERC4-206ENST00000427635 LACTBP83111 547 aaPredicted RBP6.28□□□□□ -1.4
HERC4-206ENST00000427635 ICA1Q05084 483 aa6.28□□□□□ -1.4
HERC4-206ENST00000427635 RAB42Q8N4Z0 105 aa6.28□□□□□ -1.4
HERC4-206ENST00000427635 EDEM3Q9BZQ6 932 aa6.28□□□□□ -1.4
HERC4-206ENST00000427635 RIC8AQ9NPQ8 531 aa6.28□□□□□ -1.4
HERC4-206ENST00000427635 ZNF212Q9UDV6 495 aa6.28□□□□□ -1.4
HERC4-206ENST00000427635 USH1CQ9Y6N9 552 aa6.28□□□□□ -1.4
HERC4-206ENST00000427635 SOS1Q07889 1333 aaPredicted RBP6.28□□□□□ -1.4
HERC4-206ENST00000427635 IBTKQ9P2D0 1353 aaPredicted RBP6.28□□□□□ -1.4
HERC4-206ENST00000427635 CLRN2A0PK11 232 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 OCM2P0CE71 109 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 OCMP0CE72 109 aaPredicted RBP6.27□□□□□ -1.41
HERC4-206ENST00000427635 HOXC9P31274 260 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 AP1ARQ63HQ0 302 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 SPATA5Q8NB90 893 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 PAXBP1Q9Y5B6 917 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 A2MP01023 1474 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 TMEM247A6NEH6 219 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 SPECC1L-ADORA2AF8WAN1 911 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 CAPN15O75808 1086 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 PHBP35232 272 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 ECE1P42892 770 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 TRIM14Q14142 442 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 CCDC144BQ3MJ40 725 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.27□□□□□ -1.41
HERC4-206ENST00000427635 JADE1Q6IE81 842 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 CCDC62Q6P9F0 684 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 MTRQ99707 1265 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 RBSNQ9H1K0 784 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 SLC38A10Q9HBR0 1119 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 DISC1Q9NRI5 854 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 ABCF3Q9NUQ8 709 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 LRWD1Q9UFC0 647 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 PCDHA1Q9Y5I3 950 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 TLDC2A0PJX2 215 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 NVLO15381 856 aaKnown RBP6.27□□□□□ -1.41
HERC4-206ENST00000427635 TUBB4BP68371 445 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 PTK2BQ14289 1009 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 LMBRD2Q68DH5 695 aaPredicted RBP6.27□□□□□ -1.41
HERC4-206ENST00000427635 NXNQ6DKJ4 435 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 CDHR1Q96JP9 859 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 YIPF2Q9BWQ6 316 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 NEUROG2Q9H2A3 272 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 MYO1AQ9UBC5 1043 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 LUC7L2Q9Y383 392 aaKnown RBP6.27□□□□□ -1.41
HERC4-206ENST00000427635 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.27□□□□□ -1.41
HERC4-206ENST00000427635 BZW2Q9Y6E2 419 aaKnown RBP6.27□□□□□ -1.41
HERC4-206ENST00000427635 KIF1CO43896 1103 aaKnown RBP6.27□□□□□ -1.41
HERC4-206ENST00000427635 TAF5LO75529 589 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 SLC4A1P02730 911 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 STMN1P16949 149 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 GBP1P32455 592 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 SESN3P58005 492 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 RPS8P62241 208 aaKnown RBP6.27□□□□□ -1.41
HERC4-206ENST00000427635 ATP8B2P98198 1209 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 MYO1EQ12965 1108 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 HERC4Q5GLZ8 1057 aaPredicted RBP6.27□□□□□ -1.41
HERC4-206ENST00000427635 HHATQ5VTY9 493 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 CYP26C1Q6V0L0 522 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 GBP6Q6ZN66 633 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 CCDC121Q6ZUS5 278 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 XAGE2Q96GT9 111 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 CAPZA3Q96KX2 299 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 ZMYM3Q14202 1370 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 BNIP3LO60238 219 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 MECOMQ03112 1051 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 NEDD9Q14511 834 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 TTLL6Q8N841 843 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 C7orf31Q8N865 590 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 ARHGEF1Q92888 912 aaKnown RBP6.27□□□□□ -1.41
HERC4-206ENST00000427635 ATP6V0A1Q93050 837 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 SPON1Q9HCB6 807 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 HPCAL4Q9UM19 191 aa6.27□□□□□ -1.41
HERC4-206ENST00000427635 FRMPD2Q68DX3 1309 aaPredicted RBP6.26□□□□□ -1.41
HERC4-206ENST00000427635 ERVV-2B6SEH9 535 aa6.26□□□□□ -1.41
HERC4-206ENST00000427635 FOSL1P15407 271 aa6.26□□□□□ -1.41
HERC4-206ENST00000427635 IFNA8P32881 189 aa6.26□□□□□ -1.41
HERC4-206ENST00000427635 SOX5P35711 763 aa6.26□□□□□ -1.41
HERC4-206ENST00000427635 ZNF165P49910 485 aa6.26□□□□□ -1.41
HERC4-206ENST00000427635 PLA2G4DQ86XP0 818 aa6.26□□□□□ -1.41
HERC4-206ENST00000427635 C10orf67Q8IYJ2 551 aa6.26□□□□□ -1.41
HERC4-206ENST00000427635 NECAB1Q8N987 351 aa6.26□□□□□ -1.41
HERC4-206ENST00000427635 P3H4Q92791 437 aa6.26□□□□□ -1.41
HERC4-206ENST00000427635 SDCCAG3Q96C92 435 aa6.26□□□□□ -1.41
HERC4-206ENST00000427635 METTL22Q9BUU2 404 aaPredicted RBP6.26□□□□□ -1.41
HERC4-206ENST00000427635 NUP58Q9BVL2 599 aa6.26□□□□□ -1.41
HERC4-206ENST00000427635 TBC1D7Q9P0N9 293 aa6.26□□□□□ -1.41
HERC4-206ENST00000427635 ASIC3Q9UHC3 531 aa6.26□□□□□ -1.41
HERC4-206ENST00000427635 WDR62O43379 1518 aa6.26□□□□□ -1.41
HERC4-206ENST00000427635 PDE6CP51160 858 aa6.26□□□□□ -1.41
HERC4-206ENST00000427635 MTA1Q13330 715 aa6.26□□□□□ -1.41
HERC4-206ENST00000427635 PPP2R5BQ15173 497 aa6.26□□□□□ -1.41
HERC4-206ENST00000427635 CABP7Q86V35 215 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms