RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 APOBEC3FQ8IUX4 373 aaKnown RBP9.7□□□□□ -0.86
SH3D19-204ENST00000427414 ZNF215Q9UL58 517 aaPredicted RBP9.7□□□□□ -0.86
SH3D19-204ENST00000427414 ATAD5Q96QE3 1844 aa9.7□□□□□ -0.86
SH3D19-204ENST00000427414 FDX1P10109 184 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 BRD2P25440 801 aaKnown RBP9.69□□□□□ -0.86
SH3D19-204ENST00000427414 ATP2C1P98194 919 aaPredicted RBP9.69□□□□□ -0.86
SH3D19-204ENST00000427414 PTPN14Q15678 1187 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 CCDC144BQ3MJ40 725 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 OTUD7BQ6GQQ9 843 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 STK11IPQ8N1F8 1099 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 BPIFA3Q9BQP9 254 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 DNAJC25Q9H1X3 360 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 FBXO2Q9UK22 296 aaPredicted RBP9.69□□□□□ -0.86
SH3D19-204ENST00000427414 ERICH4A6NGS2 130 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 RAD17O75943 681 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 LMNB1P20700 586 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 MOXD1Q6UVY6 613 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 GPC2Q8N158 579 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 STAG2Q8N3U4 1231 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 FSIP1Q8NA03 581 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 CSRNP1Q96S65 589 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 DEFB129Q9H1M3 183 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.69□□□□□ -0.86
SH3D19-204ENST00000427414 GOPCQ9HD26 462 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 VPS54Q9P1Q0 977 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 ZNF219Q9P2Y4 722 aaPredicted RBP9.69□□□□□ -0.86
SH3D19-204ENST00000427414 TMX2Q9Y320 296 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 VGLL3A8MV65 326 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 WNT10BO00744 389 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 ZBTB5O15062 677 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 LONP1P36776 959 aaKnown RBP9.69□□□□□ -0.86
SH3D19-204ENST00000427414 ICA1Q05084 483 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 WWC2Q6AWC2 1192 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 FAM160B2Q86V87 743 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 ZSCAN29Q8IWY8 852 aaPredicted RBP9.69□□□□□ -0.86
SH3D19-204ENST00000427414 ZFPM1Q8IX07 1006 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 AK8Q96MA6 479 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 RIC8AQ9NPQ8 531 aa9.69□□□□□ -0.86
SH3D19-204ENST00000427414 DOCK1Q14185 1865 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 USP27XA6NNY8 438 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 MYL1P05976 194 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 ASNSP08243 561 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 EEF2P13639 858 aaKnown RBP9.68□□□□□ -0.86
SH3D19-204ENST00000427414 TTC38Q5R3I4 469 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 DCAF15Q66K64 600 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 LRRC8AQ8IWT6 810 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 KCTD17Q8N5Z5 321 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 TRIML1Q8N9V2 468 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 SHISA4Q96DD7 197 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 MAGEF1Q9HAY2 307 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 KCNJ14Q9UNX9 436 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 STK24Q9Y6E0 443 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 USP17L5A8MUK1 530 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 GOLGA6L19H0YKK7 550 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 NR1I2O75469 434 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 GCFC2P16383 781 aaKnown RBP9.68□□□□□ -0.86
SH3D19-204ENST00000427414 MRPL12P52815 198 aaKnown RBP9.68□□□□□ -0.86
SH3D19-204ENST00000427414 IRX5P78411 483 aaPredicted RBP9.68□□□□□ -0.86
SH3D19-204ENST00000427414 LPAR1Q92633 364 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 TRMT1Q9NXH9 659 aaKnown RBP9.68□□□□□ -0.86
SH3D19-204ENST00000427414 MAP3K20Q9NYL2 800 aaKnown RBP9.68□□□□□ -0.86
SH3D19-204ENST00000427414 ZNF112Q9UJU3 913 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 PCDHA6Q9UN73 950 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 PCDHA8Q9Y5H6 950 aa9.68□□□□□ -0.86
SH3D19-204ENST00000427414 H7C1D1 291 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 CTNND1O60716 968 aaKnown RBP9.67□□□□□ -0.86
SH3D19-204ENST00000427414 SKILP12757 684 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 CAP2P40123 477 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 CLK2P49760 499 aaKnown RBP9.67□□□□□ -0.86
SH3D19-204ENST00000427414 AP3B2Q13367 1082 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 ARID5BQ14865 1188 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 ELF2Q15723 593 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 SLC35G1Q2M3R5 365 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 SLFN13Q68D06 897 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 FBXO38Q6PIJ6 1188 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 SIAH1Q8IUQ4 282 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 NAT10Q9H0A0 1025 aaKnown RBP9.67□□□□□ -0.86
SH3D19-204ENST00000427414 CUEDC2Q9H467 287 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 JMJD4Q9H9V9 463 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 ANO10Q9NW15 660 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 BCS1LQ9Y276 419 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 CCDC194A0A1B0GVG4 234 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 ZNF202O95125 648 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 FOSP01100 380 aaPredicted RBP9.67□□□□□ -0.86
SH3D19-204ENST00000427414 SYKP43405 635 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 NONOQ15233 471 aaKnown RBP eCLIP9.67□□□□□ -0.86
SH3D19-204ENST00000427414 STX1AQ16623 288 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 NT5DC1Q5TFE4 455 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 CHURC1Q8WUH1 139 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 ERO1AQ96HE7 468 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 TUBE1Q9UJT0 475 aa9.67□□□□□ -0.86
SH3D19-204ENST00000427414 PIK3CDO00329 1044 aa9.66□□□□□ -0.86
SH3D19-204ENST00000427414 NEMFO60524 1076 aa9.66□□□□□ -0.86
SH3D19-204ENST00000427414 PFKFB1P16118 471 aa9.66□□□□□ -0.86
SH3D19-204ENST00000427414 NAPAP54920 295 aa9.66□□□□□ -0.86
SH3D19-204ENST00000427414 PPP4R3AQ6IN85 833 aa9.66□□□□□ -0.86
SH3D19-204ENST00000427414 USP17L2Q6R6M4 530 aa9.66□□□□□ -0.86
SH3D19-204ENST00000427414 FILIP1Q7Z7B0 1213 aa9.66□□□□□ -0.86
SH3D19-204ENST00000427414 GOLPH3LQ9H4A5 285 aa9.66□□□□□ -0.86
SH3D19-204ENST00000427414 GJB4Q9NTQ9 266 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms