RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 FESP07332 822 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 PDHBP11177 359 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 ABCD1P33897 745 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 DBN1Q16643 649 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 APLFQ8IW19 511 aaPredicted RBP8.7□□□□□ -1.02
SIK3-203ENST00000415541 KIRREL3Q8IZU9 778 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 SLC35F6Q8N357 371 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 PANX2Q96RD6 677 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 SELENOOQ9BVL4 669 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 YIPF3Q9GZM5 350 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 GOPCQ9HD26 462 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 FANCLQ9NW38 375 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 BAIAP2L1Q9UHR4 511 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 SAP30BPQ9UHR5 308 aaKnown RBP8.7□□□□□ -1.02
SIK3-203ENST00000415541 CORO1CQ9ULV4 474 aaPredicted RBP8.7□□□□□ -1.02
SIK3-203ENST00000415541 TPX2Q9ULW0 747 aaKnown RBP8.7□□□□□ -1.02
SIK3-203ENST00000415541 MED1Q15648 1581 aaPredicted RBP8.7□□□□□ -1.02
SIK3-203ENST00000415541 PRKAB2O43741 272 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 ATP1A3P13637 1013 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 RANBP1P43487 201 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 PAPOLAP51003 745 aaKnown RBP8.7□□□□□ -1.02
SIK3-203ENST00000415541 ADKP55263 362 aaKnown RBP8.7□□□□□ -1.02
SIK3-203ENST00000415541 APBA1Q02410 837 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 GOLGA8FQ08AF8 430 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 GOLGA8DPQ0D2H9 430 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 CRACR2BQ8N4Y2 399 aaPredicted RBP8.7□□□□□ -1.02
SIK3-203ENST00000415541 ZNF473Q8WTR7 871 aaKnown RBP8.7□□□□□ -1.02
SIK3-203ENST00000415541 ESR2Q92731 530 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 SH3GL2Q99962 352 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 VAT1LQ9HCJ6 419 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 CACNA1FO60840 1977 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 A0A1B0GVL5 298 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 LIN7AO14910 233 aaPredicted RBP8.69□□□□□ -1.02
SIK3-203ENST00000415541 KIF5BP33176 963 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 ST3GAL1Q11201 340 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 PDCLQ13371 301 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 NCAPHQ15003 741 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 NECTIN1Q15223 517 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 ZNF772Q68DY9 489 aaPredicted RBP8.69□□□□□ -1.02
SIK3-203ENST00000415541 DTNBP1Q96EV8 351 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 ALS2CR12Q96Q35 445 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 LLPHQ9BRT6 129 aaKnown RBP8.69□□□□□ -1.02
SIK3-203ENST00000415541 DSCC1Q9BVC3 393 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 STK32BQ9NY57 414 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 FAM184BQ9ULE4 1060 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 KIF1AQ12756 1690 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 IMPDH2P12268 514 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 PDE4BQ07343 736 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 SNX1Q13596 522 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 NAA35Q5VZE5 725 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 CATIPQ7Z7H3 387 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 TMEM139Q8IV31 216 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 NSMCE1Q8WV22 266 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.69□□□□□ -1.02
SIK3-203ENST00000415541 ADGRG1Q9Y653 693 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 ZNF804BA4D1E1 1349 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 LTN1O94822 1766 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 SLIT3O75094 1523 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 ROR2Q01974 943 aaKnown RBP8.69□□□□□ -1.02
SIK3-203ENST00000415541 NFIXQ14938 502 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 SETDB1Q15047 1291 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 TXNRD1Q16881 649 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 SDCCAG8Q86SQ7 713 aaPredicted RBP8.69□□□□□ -1.02
SIK3-203ENST00000415541 B4GALNT2Q8NHY0 566 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 EZH1Q92800 747 aaPredicted RBP8.69□□□□□ -1.02
SIK3-203ENST00000415541 USP28Q96RU2 1077 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 KRT23Q9C075 422 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 MRPL44Q9H9J2 332 aaKnown RBP8.69□□□□□ -1.02
SIK3-203ENST00000415541 GPHNQ9NQX3 736 aaPredicted RBP8.69□□□□□ -1.02
SIK3-203ENST00000415541 GRIN2DO15399 1336 aa8.69□□□□□ -1.02
SIK3-203ENST00000415541 GOLGA6L10A0A0M3HER8 536 aa8.68□□□□□ -1.02
SIK3-203ENST00000415541 SRRM3A6NNA2 597 aaPredicted RBP8.68□□□□□ -1.02
SIK3-203ENST00000415541 SMIM24O75264 130 aa8.68□□□□□ -1.02
SIK3-203ENST00000415541 GTF2IP78347 998 aa8.68□□□□□ -1.02
SIK3-203ENST00000415541 SSRP1Q08945 709 aaKnown RBP8.68□□□□□ -1.02
SIK3-203ENST00000415541 MYO1EQ12965 1108 aa8.68□□□□□ -1.02
SIK3-203ENST00000415541 UBE4AQ14139 1066 aa8.68□□□□□ -1.02
SIK3-203ENST00000415541 DOK7Q18PE1 504 aa8.68□□□□□ -1.02
SIK3-203ENST00000415541 CWF19L1Q69YN2 538 aaKnown RBP8.68□□□□□ -1.02
SIK3-203ENST00000415541 SND1Q7KZF4 910 aaKnown RBP eCLIP8.68□□□□□ -1.02
SIK3-203ENST00000415541 ALG1Q9BT22 464 aa8.68□□□□□ -1.02
SIK3-203ENST00000415541 NOP53Q9NZM5 478 aaKnown RBP8.68□□□□□ -1.02
SIK3-203ENST00000415541 BCL9O00512 1426 aa8.68□□□□□ -1.02
SIK3-203ENST00000415541 USP17L12C9JPN9 530 aa8.68□□□□□ -1.02
SIK3-203ENST00000415541 USP17L21D6R901 530 aa8.68□□□□□ -1.02
SIK3-203ENST00000415541 MAFGO15525 162 aa8.68□□□□□ -1.02
SIK3-203ENST00000415541 KIF4AO95239 1232 aa8.68□□□□□ -1.02
SIK3-203ENST00000415541 CSF1RP07333 972 aa8.68□□□□□ -1.02
SIK3-203ENST00000415541 IFIT1BQ5T764 474 aaKnown RBP8.68□□□□□ -1.02
SIK3-203ENST00000415541 CRELD2Q6UXH1 353 aaPredicted RBP8.68□□□□□ -1.02
SIK3-203ENST00000415541 DPP8Q6V1X1 898 aaPredicted RBP8.68□□□□□ -1.02
SIK3-203ENST00000415541 SPATA21Q7Z572 469 aa8.68□□□□□ -1.02
SIK3-203ENST00000415541 NOA1Q8NC60 698 aaKnown RBP8.68□□□□□ -1.02
SIK3-203ENST00000415541 DPF2Q92785 391 aa8.68□□□□□ -1.02
SIK3-203ENST00000415541 CCDC97Q96F63 343 aaPredicted RBP8.68□□□□□ -1.02
SIK3-203ENST00000415541 IRX2Q9BZI1 471 aaPredicted RBP8.68□□□□□ -1.02
SIK3-203ENST00000415541 EHD4Q9H223 541 aa8.68□□□□□ -1.02
SIK3-203ENST00000415541 PAPOLBQ9NRJ5 636 aaKnown RBP8.68□□□□□ -1.02
SIK3-203ENST00000415541 MINPP1Q9UNW1 487 aa8.68□□□□□ -1.02
SIK3-203ENST00000415541 KDM3BQ7LBC6 1761 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms