RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 TSGA10IPQ3SY00 556 aa17.16■□□□□ 0.34
CHD1-202ENST00000414220 OLFML2BQ68BL8 750 aa17.16■□□□□ 0.34
CHD1-202ENST00000414220 SYNE3Q6ZMZ3 975 aa17.16■□□□□ 0.34
CHD1-202ENST00000414220 TRERF1Q96PN7 1200 aa17.16■□□□□ 0.34
CHD1-202ENST00000414220 HOMER2Q9NSB8 354 aa17.16■□□□□ 0.34
CHD1-202ENST00000414220 RIPK3Q9Y572 518 aa17.16■□□□□ 0.34
CHD1-202ENST00000414220 A0A0G2JMZ2 1700 aa17.16■□□□□ 0.34
CHD1-202ENST00000414220 CALM1P0DP23 149 aa17.15■□□□□ 0.34
CHD1-202ENST00000414220 CALM2P0DP24 149 aa17.15■□□□□ 0.34
CHD1-202ENST00000414220 CALM3P0DP25 149 aa17.15■□□□□ 0.34
CHD1-202ENST00000414220 KIF5BP33176 963 aa17.15■□□□□ 0.34
CHD1-202ENST00000414220 FGD1P98174 961 aa17.15■□□□□ 0.34
CHD1-202ENST00000414220 TRAF1Q13077 416 aa17.15■□□□□ 0.34
CHD1-202ENST00000414220 NPLOC4Q8TAT6 608 aa17.15■□□□□ 0.34
CHD1-202ENST00000414220 IGDCC4Q8TDY8 1250 aa17.15■□□□□ 0.34
CHD1-202ENST00000414220 AGBL1Q96MI9 1066 aa17.15■□□□□ 0.34
CHD1-202ENST00000414220 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.15■□□□□ 0.34
CHD1-202ENST00000414220 UNC93B1Q9H1C4 597 aa17.15■□□□□ 0.34
CHD1-202ENST00000414220 RNF146Q9NTX7 359 aa17.15■□□□□ 0.34
CHD1-202ENST00000414220 TAF6LQ9Y6J9 622 aa17.15■□□□□ 0.34
CHD1-202ENST00000414220 RLFQ13129 1914 aa17.15■□□□□ 0.34
CHD1-202ENST00000414220 POTEFA5A3E0 1075 aa17.14■□□□□ 0.33
CHD1-202ENST00000414220 COBLO75128 1261 aa17.14■□□□□ 0.33
CHD1-202ENST00000414220 SGPL1O95470 568 aa17.14■□□□□ 0.33
CHD1-202ENST00000414220 TFRCP02786 760 aaKnown RBP17.14■□□□□ 0.33
CHD1-202ENST00000414220 PSMA5P28066 241 aa17.14■□□□□ 0.33
CHD1-202ENST00000414220 LIFRP42702 1097 aa17.14■□□□□ 0.33
CHD1-202ENST00000414220 GJA8P48165 433 aa17.14■□□□□ 0.33
CHD1-202ENST00000414220 CCL14Q16627 93 aa17.14■□□□□ 0.33
CHD1-202ENST00000414220 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.14■□□□□ 0.33
CHD1-202ENST00000414220 DHX32Q7L7V1 743 aaKnown RBP17.14■□□□□ 0.33
CHD1-202ENST00000414220 RASGRP2Q7LDG7 609 aa17.14■□□□□ 0.33
CHD1-202ENST00000414220 MSL3Q8N5Y2 521 aaKnown RBP17.14■□□□□ 0.33
CHD1-202ENST00000414220 CTCFLQ8NI51 663 aaPredicted RBP17.14■□□□□ 0.33
CHD1-202ENST00000414220 NUP133Q8WUM0 1156 aa17.14■□□□□ 0.33
CHD1-202ENST00000414220 UBA5Q9GZZ9 404 aa17.14■□□□□ 0.33
CHD1-202ENST00000414220 PFASO15067 1338 aa17.14■□□□□ 0.33
CHD1-202ENST00000414220 ZNF536O15090 1300 aa17.14■□□□□ 0.33
CHD1-202ENST00000414220 KLRF2D3W0D1 207 aa17.13■□□□□ 0.33
CHD1-202ENST00000414220 MSCO60682 206 aa17.13■□□□□ 0.33
CHD1-202ENST00000414220 DDAH1O94760 285 aa17.13■□□□□ 0.33
CHD1-202ENST00000414220 HSPA4P34932 840 aa17.13■□□□□ 0.33
CHD1-202ENST00000414220 GNAQP50148 359 aa17.13■□□□□ 0.33
CHD1-202ENST00000414220 SNAP25P60880 206 aa17.13■□□□□ 0.33
CHD1-202ENST00000414220 CACNB2Q08289 660 aaPredicted RBP17.13■□□□□ 0.33
CHD1-202ENST00000414220 MAP3K21Q5TCX8 1036 aa17.13■□□□□ 0.33
CHD1-202ENST00000414220 U2AF1L4Q8WU68 220 aaKnown RBP17.13■□□□□ 0.33
CHD1-202ENST00000414220 MAML3Q96JK9 1138 aa17.13■□□□□ 0.33
CHD1-202ENST00000414220 DEFB118Q96PH6 123 aa17.13■□□□□ 0.33
CHD1-202ENST00000414220 MAP3K14Q99558 947 aa17.13■□□□□ 0.33
CHD1-202ENST00000414220 VAT1LQ9HCJ6 419 aa17.13■□□□□ 0.33
CHD1-202ENST00000414220 NRBP1Q9UHY1 535 aa17.13■□□□□ 0.33
CHD1-202ENST00000414220 SLC12A7Q9Y666 1083 aa17.13■□□□□ 0.33
CHD1-202ENST00000414220 WDR19Q8NEZ3 1342 aa17.13■□□□□ 0.33
CHD1-202ENST00000414220 POTEB2H3BUK9 544 aa17.12■□□□□ 0.33
CHD1-202ENST00000414220 SH2B2O14492 632 aaPredicted RBP17.12■□□□□ 0.33
CHD1-202ENST00000414220 PGK2P07205 417 aa17.12■□□□□ 0.33
CHD1-202ENST00000414220 EN2P19622 333 aaPredicted RBP17.12■□□□□ 0.33
CHD1-202ENST00000414220 CNGA1P29973 690 aa17.12■□□□□ 0.33
CHD1-202ENST00000414220 ANTXR2P58335 489 aa17.12■□□□□ 0.33
CHD1-202ENST00000414220 GRM4Q14833 912 aa17.12■□□□□ 0.33
CHD1-202ENST00000414220 CDC37Q16543 378 aaPredicted RBP17.12■□□□□ 0.33
CHD1-202ENST00000414220 ZNF792Q3KQV3 632 aa17.12■□□□□ 0.33
CHD1-202ENST00000414220 ADGRF4Q8IZF3 695 aa17.12■□□□□ 0.33
CHD1-202ENST00000414220 MPHOSPH6Q99547 160 aaKnown RBP17.12■□□□□ 0.33
CHD1-202ENST00000414220 LZTS2Q9BRK4 669 aa17.12■□□□□ 0.33
CHD1-202ENST00000414220 PAK6Q9NQU5 681 aaPredicted RBP17.12■□□□□ 0.33
CHD1-202ENST00000414220 DOCK3Q8IZD9 2030 aa17.12■□□□□ 0.33
CHD1-202ENST00000414220 PALM3A6NDB9 673 aaPredicted RBP17.11■□□□□ 0.33
CHD1-202ENST00000414220 CYP2C19P33261 490 aa17.11■□□□□ 0.33
CHD1-202ENST00000414220 TRIM32Q13049 653 aa17.11■□□□□ 0.33
CHD1-202ENST00000414220 BLOC1S2Q6QNY1 142 aa17.11■□□□□ 0.33
CHD1-202ENST00000414220 NSMFQ6X4W1 530 aa17.11■□□□□ 0.33
CHD1-202ENST00000414220 ZNF467Q7Z7K2 595 aaPredicted RBP17.11■□□□□ 0.33
CHD1-202ENST00000414220 ZNF654Q8IZM8 581 aa17.11■□□□□ 0.33
CHD1-202ENST00000414220 TINF2Q9BSI4 451 aa17.11■□□□□ 0.33
CHD1-202ENST00000414220 MAF1Q9H063 256 aa17.11■□□□□ 0.33
CHD1-202ENST00000414220 LY9Q9HBG7 655 aa17.11■□□□□ 0.33
CHD1-202ENST00000414220 FLRT1Q9NZU1 646 aa17.11■□□□□ 0.33
CHD1-202ENST00000414220 CNPY2Q9Y2B0 182 aa17.11■□□□□ 0.33
CHD1-202ENST00000414220 PARP14Q460N5 1801 aa17.11■□□□□ 0.33
CHD1-202ENST00000414220 B4DLN1 442 aa17.1■□□□□ 0.33
CHD1-202ENST00000414220 MRPL12P52815 198 aaKnown RBP17.1■□□□□ 0.33
CHD1-202ENST00000414220 TROAPQ12815 778 aa17.1■□□□□ 0.33
CHD1-202ENST00000414220 FBXO11Q86XK2 927 aa17.1■□□□□ 0.33
CHD1-202ENST00000414220 MCF2L2Q86YR7 1114 aa17.1■□□□□ 0.33
CHD1-202ENST00000414220 RASEFQ8IZ41 740 aa17.1■□□□□ 0.33
CHD1-202ENST00000414220 JAKMIP1Q96N16 626 aaKnown RBP17.1■□□□□ 0.33
CHD1-202ENST00000414220 A1CFQ9NQ94 594 aaKnown RBP17.1■□□□□ 0.33
CHD1-202ENST00000414220 ADD3Q9UEY8 706 aaKnown RBP17.1■□□□□ 0.33
CHD1-202ENST00000414220 MAD2L2Q9UI95 211 aa17.1■□□□□ 0.33
CHD1-202ENST00000414220 MRPL11Q9Y3B7 192 aaKnown RBP17.1■□□□□ 0.33
CHD1-202ENST00000414220 ABCB11O95342 1321 aa17.1■□□□□ 0.33
CHD1-202ENST00000414220 DNAJC25-GNG10A0A024R161 153 aa17.09■□□□□ 0.33
CHD1-202ENST00000414220 PTPDC1A2A3K4 754 aa17.09■□□□□ 0.33
CHD1-202ENST00000414220 ASB14A6NK59 587 aa17.09■□□□□ 0.33
CHD1-202ENST00000414220 USH1GQ495M9 461 aa17.09■□□□□ 0.33
CHD1-202ENST00000414220 RNF207Q6ZRF8 634 aa17.09■□□□□ 0.33
CHD1-202ENST00000414220 SGMS1Q86VZ5 419 aa17.09■□□□□ 0.33
CHD1-202ENST00000414220 STAG2Q8N3U4 1231 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms