RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 XPNPEP3Q9NQH7 507 aa13.68□□□□□ -0.22
LINC00963-201ENST00000412141 RNF146Q9NTX7 359 aa13.68□□□□□ -0.22
LINC00963-201ENST00000412141 DIS3Q9Y2L1 958 aaKnown RBP13.68□□□□□ -0.22
LINC00963-201ENST00000412141 DDX49Q9Y6V7 483 aaKnown RBP13.68□□□□□ -0.22
LINC00963-201ENST00000412141 ZNF236Q9UL36 1845 aa13.67□□□□□ -0.22
LINC00963-201ENST00000412141 POTEB2H3BUK9 544 aa13.67□□□□□ -0.22
LINC00963-201ENST00000412141 SNAI1O95863 264 aaPredicted RBP13.67□□□□□ -0.22
LINC00963-201ENST00000412141 TOP1P11387 765 aaKnown RBP13.67□□□□□ -0.22
LINC00963-201ENST00000412141 MDM2Q00987 491 aaPredicted RBP13.67□□□□□ -0.22
LINC00963-201ENST00000412141 CHST13Q8NET6 341 aa13.67□□□□□ -0.22
LINC00963-201ENST00000412141 FBXO40Q9UH90 709 aa13.67□□□□□ -0.22
LINC00963-201ENST00000412141 ZNF536O15090 1300 aa13.66□□□□□ -0.22
LINC00963-201ENST00000412141 NEDD4P46934 1319 aa13.66□□□□□ -0.22
LINC00963-201ENST00000412141 DNAJC25-GNG10A0A024R161 153 aa13.66□□□□□ -0.22
LINC00963-201ENST00000412141 HIP1O00291 1037 aa13.66□□□□□ -0.22
LINC00963-201ENST00000412141 SOX1O00570 391 aaPredicted RBP13.66□□□□□ -0.22
LINC00963-201ENST00000412141 KDM4AO75164 1064 aa13.66□□□□□ -0.22
LINC00963-201ENST00000412141 ZNF865P0CJ78 1059 aaPredicted RBP13.66□□□□□ -0.22
LINC00963-201ENST00000412141 OAZ1P54368 228 aa13.66□□□□□ -0.22
LINC00963-201ENST00000412141 RTP1P59025 263 aa13.66□□□□□ -0.22
LINC00963-201ENST00000412141 MUM1L1Q5H9M0 696 aa13.66□□□□□ -0.22
LINC00963-201ENST00000412141 NSMFQ6X4W1 530 aa13.66□□□□□ -0.22
LINC00963-201ENST00000412141 TICAM2Q86XR7 235 aa13.66□□□□□ -0.22
LINC00963-201ENST00000412141 DCAF4Q8WV16 495 aa13.66□□□□□ -0.22
LINC00963-201ENST00000412141 ESR2Q92731 530 aa13.66□□□□□ -0.22
LINC00963-201ENST00000412141 GDF15Q99988 308 aa13.66□□□□□ -0.22
LINC00963-201ENST00000412141 RNF41Q9H4P4 317 aaPredicted RBP13.66□□□□□ -0.22
LINC00963-201ENST00000412141 ACAD9Q9H845 621 aa13.66□□□□□ -0.22
LINC00963-201ENST00000412141 PRDM5Q9NQX1 630 aaPredicted RBP13.66□□□□□ -0.22
LINC00963-201ENST00000412141 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.66□□□□□ -0.22
LINC00963-201ENST00000412141 CCPG1Q9ULG6 757 aa13.66□□□□□ -0.22
LINC00963-201ENST00000412141 ZMYM6O95789 1325 aa13.65□□□□□ -0.22
LINC00963-201ENST00000412141 COL6A3P12111 3177 aa13.65□□□□□ -0.22
LINC00963-201ENST00000412141 A0A1W2PPC1 479 aa13.65□□□□□ -0.22
LINC00963-201ENST00000412141 FDX1P10109 184 aa13.65□□□□□ -0.22
LINC00963-201ENST00000412141 AKR1A1P14550 325 aa13.65□□□□□ -0.22
LINC00963-201ENST00000412141 GSPT1P15170 499 aaKnown RBP13.65□□□□□ -0.22
LINC00963-201ENST00000412141 IRX5P78411 483 aaPredicted RBP13.65□□□□□ -0.22
LINC00963-201ENST00000412141 TTC22Q5TAA0 569 aa13.65□□□□□ -0.22
LINC00963-201ENST00000412141 SYDE2Q5VT97 1194 aa13.65□□□□□ -0.22
LINC00963-201ENST00000412141 SLC39A5Q6ZMH5 540 aa13.65□□□□□ -0.22
LINC00963-201ENST00000412141 CCDC144CPQ8IYA2 1237 aa13.65□□□□□ -0.22
LINC00963-201ENST00000412141 FGD4Q96M96 766 aa13.65□□□□□ -0.22
LINC00963-201ENST00000412141 PURBQ96QR8 312 aaKnown RBP13.65□□□□□ -0.22
LINC00963-201ENST00000412141 UBE2OQ9C0C9 1292 aaKnown RBP13.65□□□□□ -0.22
LINC00963-201ENST00000412141 IL25Q9H293 177 aa13.65□□□□□ -0.22
LINC00963-201ENST00000412141 A1CFQ9NQ94 594 aaKnown RBP13.65□□□□□ -0.22
LINC00963-201ENST00000412141 FAM184BQ9ULE4 1060 aa13.65□□□□□ -0.22
LINC00963-201ENST00000412141 FRMPD3Q5JV73 1810 aa13.64□□□□□ -0.23
LINC00963-201ENST00000412141 PLXNA1Q9UIW2 1896 aa13.64□□□□□ -0.23
LINC00963-201ENST00000412141 SOWAHBA6NEL2 793 aa13.64□□□□□ -0.23
LINC00963-201ENST00000412141 B4E1Z4 1266 aa13.64□□□□□ -0.23
LINC00963-201ENST00000412141 GOLGA8HP0CJ92 632 aa13.64□□□□□ -0.23
LINC00963-201ENST00000412141 ACVR2BQ13705 512 aa13.64□□□□□ -0.23
LINC00963-201ENST00000412141 TRIM60Q495X7 471 aa13.64□□□□□ -0.23
LINC00963-201ENST00000412141 NOL8Q76FK4 1167 aaKnown RBP13.64□□□□□ -0.23
LINC00963-201ENST00000412141 ARMCX2Q7L311 632 aa13.64□□□□□ -0.23
LINC00963-201ENST00000412141 RNF180Q86T96 592 aa13.64□□□□□ -0.23
LINC00963-201ENST00000412141 LRCH3Q96II8 777 aa13.64□□□□□ -0.23
LINC00963-201ENST00000412141 CPVLQ9H3G5 476 aa13.64□□□□□ -0.23
LINC00963-201ENST00000412141 TCP11L1Q9NUJ3 509 aa13.64□□□□□ -0.23
LINC00963-201ENST00000412141 PRKAG2Q9UGJ0 569 aa13.64□□□□□ -0.23
LINC00963-201ENST00000412141 NRBP1Q9UHY1 535 aa13.64□□□□□ -0.23
LINC00963-201ENST00000412141 SYNGAP1Q96PV0 1343 aa13.64□□□□□ -0.23
LINC00963-201ENST00000412141 PLA2G6O60733 806 aa13.63□□□□□ -0.23
LINC00963-201ENST00000412141 PDHBP11177 359 aa13.63□□□□□ -0.23
LINC00963-201ENST00000412141 NOVP48745 357 aa13.63□□□□□ -0.23
LINC00963-201ENST00000412141 IMMTQ16891 758 aaKnown RBP13.63□□□□□ -0.23
LINC00963-201ENST00000412141 CCDC144BQ3MJ40 725 aa13.63□□□□□ -0.23
LINC00963-201ENST00000412141 MAMDC4Q6UXC1 1216 aa13.63□□□□□ -0.23
LINC00963-201ENST00000412141 EEPD1Q7L9B9 569 aa13.63□□□□□ -0.23
LINC00963-201ENST00000412141 LBHD1Q9BQE6 289 aaPredicted RBP13.63□□□□□ -0.23
LINC00963-201ENST00000412141 DSCC1Q9BVC3 393 aa13.63□□□□□ -0.23
LINC00963-201ENST00000412141 UBA5Q9GZZ9 404 aa13.63□□□□□ -0.23
LINC00963-201ENST00000412141 MYADML2A6NDP7 307 aa13.62□□□□□ -0.23
LINC00963-201ENST00000412141 ADCY6O43306 1168 aa13.62□□□□□ -0.23
LINC00963-201ENST00000412141 ICAM1P05362 532 aa13.62□□□□□ -0.23
LINC00963-201ENST00000412141 C6orf222P0C671 652 aaPredicted RBP13.62□□□□□ -0.23
LINC00963-201ENST00000412141 PTGS1P23219 599 aa13.62□□□□□ -0.23
LINC00963-201ENST00000412141 KCNA10Q16322 511 aa13.62□□□□□ -0.23
LINC00963-201ENST00000412141 TKFCQ3LXA3 575 aa13.62□□□□□ -0.23
LINC00963-201ENST00000412141 ZNF467Q7Z7K2 595 aaPredicted RBP13.62□□□□□ -0.23
LINC00963-201ENST00000412141 MSL3Q8N5Y2 521 aaKnown RBP13.62□□□□□ -0.23
LINC00963-201ENST00000412141 FAM133AQ8N9E0 248 aa13.62□□□□□ -0.23
LINC00963-201ENST00000412141 VTI1AQ96AJ9 217 aa13.62□□□□□ -0.23
LINC00963-201ENST00000412141 TTC14Q96N46 770 aa13.62□□□□□ -0.23
LINC00963-201ENST00000412141 RANBP17Q9H2T7 1088 aaKnown RBP13.62□□□□□ -0.23
LINC00963-201ENST00000412141 CYP39A1Q9NYL5 469 aa13.62□□□□□ -0.23
LINC00963-201ENST00000412141 CTNNA3Q9UI47 895 aa13.62□□□□□ -0.23
LINC00963-201ENST00000412141 PHF24Q9UPV7 400 aa13.62□□□□□ -0.23
LINC00963-201ENST00000412141 SYNRGQ9UMZ2 1314 aa13.62□□□□□ -0.23
LINC00963-201ENST00000412141 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.61□□□□□ -0.23
LINC00963-201ENST00000412141 A0A1W2PQ45 241 aaPredicted RBP13.61□□□□□ -0.23
LINC00963-201ENST00000412141 A0A1W2PQY0 241 aa13.61□□□□□ -0.23
LINC00963-201ENST00000412141 PTPDC1A2A3K4 754 aa13.61□□□□□ -0.23
LINC00963-201ENST00000412141 NFIBO00712 420 aa13.61□□□□□ -0.23
LINC00963-201ENST00000412141 PQBP1O60828 265 aaKnown RBP13.61□□□□□ -0.23
LINC00963-201ENST00000412141 PCP11498 1178 aaKnown RBP13.61□□□□□ -0.23
LINC00963-201ENST00000412141 BMP8BP34820 402 aa13.61□□□□□ -0.23
LINC00963-201ENST00000412141 TLE2Q04725 743 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms