RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 ZNF536O15090 1300 aa21.01■□□□□ 0.95
PDLIM2-206ENST00000409141 TFRCP02786 760 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-206ENST00000409141 SART3Q15020 963 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-206ENST00000409141 RBBP6Q7Z6E9 1792 aaKnown RBP21■□□□□ 0.95
PDLIM2-206ENST00000409141 CYP2C19P33261 490 aa21■□□□□ 0.95
PDLIM2-206ENST00000409141 RNF20Q5VTR2 975 aa21■□□□□ 0.95
PDLIM2-206ENST00000409141 OLFML2BQ68BL8 750 aa21■□□□□ 0.95
PDLIM2-206ENST00000409141 MB21D2Q8IYB1 491 aaPredicted RBP21■□□□□ 0.95
PDLIM2-206ENST00000409141 RANBP17Q9H2T7 1088 aaKnown RBP21■□□□□ 0.95
PDLIM2-206ENST00000409141 ALAS1P13196 640 aa20.99■□□□□ 0.95
PDLIM2-206ENST00000409141 TKFCQ3LXA3 575 aa20.99■□□□□ 0.95
PDLIM2-206ENST00000409141 ANKRD35Q8N283 1001 aa20.99■□□□□ 0.95
PDLIM2-206ENST00000409141 SHISA4Q96DD7 197 aa20.99■□□□□ 0.95
PDLIM2-206ENST00000409141 MAML3Q96JK9 1138 aa20.99■□□□□ 0.95
PDLIM2-206ENST00000409141 UBA5Q9GZZ9 404 aa20.99■□□□□ 0.95
PDLIM2-206ENST00000409141 ZNF236Q9UL36 1845 aa20.98■□□□□ 0.95
PDLIM2-206ENST00000409141 ICAM1P05362 532 aa20.98■□□□□ 0.95
PDLIM2-206ENST00000409141 PARP1P09874 1014 aaKnown RBP20.98■□□□□ 0.95
PDLIM2-206ENST00000409141 CCND3P30281 292 aaPredicted RBP20.98■□□□□ 0.95
PDLIM2-206ENST00000409141 ANTXR2P58335 489 aa20.98■□□□□ 0.95
PDLIM2-206ENST00000409141 WTAPQ15007 396 aa20.98■□□□□ 0.95
PDLIM2-206ENST00000409141 ZNF792Q3KQV3 632 aa20.98■□□□□ 0.95
PDLIM2-206ENST00000409141 ASPRV1Q53RT3 343 aa20.98■□□□□ 0.95
PDLIM2-206ENST00000409141 TMEM67Q5HYA8 995 aa20.98■□□□□ 0.95
PDLIM2-206ENST00000409141 TRERF1Q96PN7 1200 aa20.98■□□□□ 0.95
PDLIM2-206ENST00000409141 ACAD9Q9H845 621 aa20.98■□□□□ 0.95
PDLIM2-206ENST00000409141 RNF146Q9NTX7 359 aa20.98■□□□□ 0.95
PDLIM2-206ENST00000409141 CCPG1Q9ULG6 757 aa20.98■□□□□ 0.95
PDLIM2-206ENST00000409141 DIS3Q9Y2L1 958 aaKnown RBP20.98■□□□□ 0.95
PDLIM2-206ENST00000409141 IGHA2P01877 340 aa20.97■□□□□ 0.95
PDLIM2-206ENST00000409141 CAPN2P17655 700 aa20.96■□□□□ 0.95
PDLIM2-206ENST00000409141 CNGA1P29973 690 aa20.96■□□□□ 0.95
PDLIM2-206ENST00000409141 MCM5P33992 734 aa20.96■□□□□ 0.95
PDLIM2-206ENST00000409141 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.96■□□□□ 0.955e-6■■■□□ 17.2
PDLIM2-206ENST00000409141 IGDCC4Q8TDY8 1250 aa20.96■□□□□ 0.95
PDLIM2-206ENST00000409141 CPVLQ9H3G5 476 aa20.96■□□□□ 0.95
PDLIM2-206ENST00000409141 ZNFX1Q9P2E3 1918 aaKnown RBP20.96■□□□□ 0.95
PDLIM2-206ENST00000409141 PRC1O43663 620 aa20.95■□□□□ 0.94
PDLIM2-206ENST00000409141 CRISPLD2Q9H0B8 497 aa20.95■□□□□ 0.94
PDLIM2-206ENST00000409141 SENP2Q9HC62 589 aa20.95■□□□□ 0.94
PDLIM2-206ENST00000409141 DNAJC25-GNG10A0A024R161 153 aa20.94■□□□□ 0.94
PDLIM2-206ENST00000409141 DHX16O60231 1041 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-206ENST00000409141 MUM1L1Q5H9M0 696 aa20.94■□□□□ 0.94
PDLIM2-206ENST00000409141 ADGRF4Q8IZF3 695 aa20.94■□□□□ 0.94
PDLIM2-206ENST00000409141 TINF2Q9BSI4 451 aa20.94■□□□□ 0.94
PDLIM2-206ENST00000409141 MTA3Q9BTC8 594 aa20.94■□□□□ 0.94
PDLIM2-206ENST00000409141 PNMA2Q9UL42 364 aa20.94■□□□□ 0.94
PDLIM2-206ENST00000409141 CYBAP13498 195 aa20.94■□□□□ 0.94
PDLIM2-206ENST00000409141 TAL1P17542 331 aaPredicted RBP20.94■□□□□ 0.94
PDLIM2-206ENST00000409141 PRAMEF19Q5SWL8 479 aa20.94■□□□□ 0.94
PDLIM2-206ENST00000409141 CATIPQ7Z7H3 387 aa20.94■□□□□ 0.94
PDLIM2-206ENST00000409141 STAG2Q8N3U4 1231 aa20.94■□□□□ 0.94
PDLIM2-206ENST00000409141 TRPV1Q8NER1 839 aa20.94■□□□□ 0.94
PDLIM2-206ENST00000409141 VAT1LQ9HCJ6 419 aa20.94■□□□□ 0.94
PDLIM2-206ENST00000409141 A1CFQ9NQ94 594 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-206ENST00000409141 KLRF2D3W0D1 207 aa20.93■□□□□ 0.94
PDLIM2-206ENST00000409141 POTEB2H3BUK9 544 aa20.93■□□□□ 0.94
PDLIM2-206ENST00000409141 REC8O95072 547 aa20.93■□□□□ 0.94
PDLIM2-206ENST00000409141 RASEFQ8IZ41 740 aa20.93■□□□□ 0.94
PDLIM2-206ENST00000409141 TMEM87BQ96K49 555 aa20.93■□□□□ 0.94
PDLIM2-206ENST00000409141 GPHNQ9NQX3 736 aaPredicted RBP20.93■□□□□ 0.94
PDLIM2-206ENST00000409141 MAD2L2Q9UI95 211 aa20.93■□□□□ 0.94
PDLIM2-206ENST00000409141 PFASO15067 1338 aa20.92■□□□□ 0.94
PDLIM2-206ENST00000409141 FARP2O94887 1054 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-206ENST00000409141 COL9A3Q14050 684 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-206ENST00000409141 CDC37Q16543 378 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-206ENST00000409141 TSGA10IPQ3SY00 556 aa20.92■□□□□ 0.94
PDLIM2-206ENST00000409141 LHX8Q68G74 356 aa20.92■□□□□ 0.94
PDLIM2-206ENST00000409141 NSMFQ6X4W1 530 aa20.92■□□□□ 0.94
PDLIM2-206ENST00000409141 TMTC2Q8N394 836 aa20.92■□□□□ 0.94
PDLIM2-206ENST00000409141 MSL3Q8N5Y2 521 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-206ENST00000409141 NEK1Q96PY6 1258 aa20.92■□□□□ 0.94
PDLIM2-206ENST00000409141 LY9Q9HBG7 655 aa20.92■□□□□ 0.94
PDLIM2-206ENST00000409141 WDR19Q8NEZ3 1342 aa20.91■□□□□ 0.94
PDLIM2-206ENST00000409141 PALM3A6NDB9 673 aaPredicted RBP20.91■□□□□ 0.94
PDLIM2-206ENST00000409141 CNTN2Q02246 1040 aa20.91■□□□□ 0.94
PDLIM2-206ENST00000409141 TROAPQ12815 778 aa20.91■□□□□ 0.94
PDLIM2-206ENST00000409141 KRT32Q14532 448 aa20.91■□□□□ 0.94
PDLIM2-206ENST00000409141 GRM4Q14833 912 aa20.91■□□□□ 0.94
PDLIM2-206ENST00000409141 NFXL1Q6ZNB6 911 aa20.91■□□□□ 0.94
PDLIM2-206ENST00000409141 ZNF467Q7Z7K2 595 aaPredicted RBP20.91■□□□□ 0.94
PDLIM2-206ENST00000409141 JMJD4Q9H9V9 463 aa20.91■□□□□ 0.94
PDLIM2-206ENST00000409141 DDX20Q9UHI6 824 aaKnown RBP20.91■□□□□ 0.94
PDLIM2-206ENST00000409141 OGDHLQ9ULD0 1010 aa20.91■□□□□ 0.94
PDLIM2-206ENST00000409141 SH2B2O14492 632 aaPredicted RBP20.9■□□□□ 0.94
PDLIM2-206ENST00000409141 MSCO60682 206 aa20.9■□□□□ 0.94
PDLIM2-206ENST00000409141 USH1GQ495M9 461 aa20.9■□□□□ 0.94
PDLIM2-206ENST00000409141 ANKLE1Q8NAG6 615 aa20.9■□□□□ 0.94
PDLIM2-206ENST00000409141 NUP133Q8WUM0 1156 aa20.9■□□□□ 0.94
PDLIM2-206ENST00000409141 CYP39A1Q9NYL5 469 aa20.9■□□□□ 0.94
PDLIM2-206ENST00000409141 NRBP1Q9UHY1 535 aa20.9■□□□□ 0.94
PDLIM2-206ENST00000409141 CNPY2Q9Y2B0 182 aa20.9■□□□□ 0.94
PDLIM2-206ENST00000409141 BRCA2P51587 3418 aa20.9■□□□□ 0.94
PDLIM2-206ENST00000409141 CCDC69A6NI79 296 aa20.89■□□□□ 0.94
PDLIM2-206ENST00000409141 ADCK5Q3MIX3 580 aa20.89■□□□□ 0.94
PDLIM2-206ENST00000409141 MAMDC4Q6UXC1 1216 aa20.89■□□□□ 0.94
PDLIM2-206ENST00000409141 UBE2Q1Q7Z7E8 422 aa20.89■□□□□ 0.94
PDLIM2-206ENST00000409141 FAM133AQ8N9E0 248 aa20.89■□□□□ 0.94
PDLIM2-206ENST00000409141 LRRC2Q9BYS8 371 aa20.89■□□□□ 0.94
PDLIM2-206ENST00000409141 SYNGAP1Q96PV0 1343 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms