RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 PIK3CDO00329 1044 aa6.8□□□□□ -1.32
RAPGEF4-203ENST00000397087 CCDC144BQ3MJ40 725 aa6.8□□□□□ -1.32
RAPGEF4-203ENST00000397087 HSP90AA4PQ58FG1 418 aa6.8□□□□□ -1.32
RAPGEF4-203ENST00000397087 CCDC144CPQ8IYA2 1237 aa6.8□□□□□ -1.32
RAPGEF4-203ENST00000397087 GIMAP8Q8ND71 665 aaPredicted RBP6.8□□□□□ -1.32
RAPGEF4-203ENST00000397087 PHKBQ93100 1093 aa6.8□□□□□ -1.32
RAPGEF4-203ENST00000397087 DISC1Q9NRI5 854 aa6.8□□□□□ -1.32
RAPGEF4-203ENST00000397087 ADD3Q9UEY8 706 aaKnown RBP6.8□□□□□ -1.32
RAPGEF4-203ENST00000397087 MTMR7Q9Y216 660 aa6.8□□□□□ -1.32
RAPGEF4-203ENST00000397087 PCDHB6Q9Y5E3 794 aa6.8□□□□□ -1.32
RAPGEF4-203ENST00000397087 PCDHA5Q9Y5H7 936 aa6.8□□□□□ -1.32
RAPGEF4-203ENST00000397087 PHIPQ8WWQ0 1821 aa6.8□□□□□ -1.32
RAPGEF4-203ENST00000397087 WDR90Q96KV7 1748 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 BICDL2A1A5D9 508 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 BIN1O00499 593 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 LCA5LO95447 670 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 SRGNP10124 158 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 PRKAR2AP13861 404 aaKnown RBP6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 BMP6P22004 513 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 DYNLL1P63167 89 aaKnown RBP6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 STRIP1Q5VSL9 837 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 ARMCX5Q6P1M9 558 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 CNGA4Q8IV77 575 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 FOXP4Q8IVH2 680 aaPredicted RBP6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 SEPT12Q8IYM1 358 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 C16orf45Q96MC5 204 aaPredicted RBP6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 ZNHIT6Q9NWK9 470 aaKnown RBP6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 DNAI1Q9UI46 699 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 CYP3A4P08684 503 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 SFPQP23246 707 aaKnown RBP eCLIP6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 CDK8P49336 464 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 USP11P51784 963 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 AMPD3Q01432 767 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 HELBQ8NG08 1087 aaPredicted RBP6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 SYN2Q92777 582 aaPredicted RBP6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 FTOQ9C0B1 505 aaKnown RBP eCLIP6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 XPO4Q9C0E2 1151 aaKnown RBP6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 FRMPD4Q14CM0 1322 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 SCN9AQ15858 1988 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 UBAP1LF5GYI3 381 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 SCP2P22307 547 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 ITIH3Q06033 890 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 MEA1Q16626 185 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 JAKMIP3Q5VZ66 844 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 ADSSL1Q8N142 457 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 SH3RF3Q8TEJ3 882 aaPredicted RBP6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 RRP36Q96EU6 259 aaKnown RBP6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 V9GYY5 206 aaPredicted RBP6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 PITPNM2Q9BZ72 1349 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 SYNRGQ9UMZ2 1314 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 LRRC37A2A6NM11 1700 aa6.79□□□□□ -1.32
RAPGEF4-203ENST00000397087 FRMD3A2A2Y4 597 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 POTEB2H3BUK9 544 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 PLEKHA8P1O95397 391 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 POLR3DP05423 398 aaPredicted RBP6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 CBX1P83916 185 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 Q4G0T1 1027 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 RRP12Q5JTH9 1297 aaKnown RBP6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 RASGRP2Q7LDG7 609 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 SDR42E1Q8WUS8 393 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 TMEM47Q9BQJ4 181 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 LRRC4BQ9NT99 713 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 MTMR4Q9NYA4 1195 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 MYO6Q9UM54 1294 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 PNMA6FA0A0J9YX94 578 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 KLRC4O43908 158 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 FGFR1OPO95684 399 aaKnown RBP6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 PARP1P09874 1014 aaKnown RBP6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 CIITAP33076 1130 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 PPP2R3AQ06190 1150 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 DDR1Q08345 913 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 OTUD7BQ6GQQ9 843 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 KRT27Q7Z3Y8 459 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 TXLNBQ8N3L3 684 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 KIF18AQ8NI77 898 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 DNAJC7Q99615 494 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 ZMYND15Q9H091 742 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 TRMT1Q9NXH9 659 aaKnown RBP6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 SERTAD1Q9UHV2 236 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 TTF2Q9UNY4 1162 aaKnown RBP6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 TSPY2A6NKD2 308 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 SKILP12757 684 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 RXRAP19793 462 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 PRDX5P30044 214 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 BTDP43251 543 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 NONOQ15233 471 aaKnown RBP eCLIP6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 CEP135Q66GS9 1140 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 E4F1Q66K89 784 aaPredicted RBP6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 ARID2Q68CP9 1835 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 ZNF444Q8N0Y2 327 aaPredicted RBP6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 SYMPKQ92797 1274 aaKnown RBP6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 CCDC47Q96A33 483 aaKnown RBP6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 PPP1R13BQ96KQ4 1090 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 PSMD1Q99460 953 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 RAB34Q9BZG1 259 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 NUCKS1Q9H1E3 243 aaKnown RBP6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 INTS13Q9NVM9 706 aa6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 SRP68Q9UHB9 627 aaKnown RBP6.78□□□□□ -1.32
RAPGEF4-203ENST00000397087 USP20Q9Y2K6 914 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms