RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 VIL1P09327 827 aaKnown RBP22.79■■□□□ 1.24
PTPN11-202ENST00000392597 BMP6P22004 513 aa22.79■■□□□ 1.24
PTPN11-202ENST00000392597 ISM2Q6H9L7 571 aa22.79■■□□□ 1.24
PTPN11-202ENST00000392597 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.79■■□□□ 1.24
PTPN11-202ENST00000392597 CCDC186Q7Z3E2 898 aa22.79■■□□□ 1.24
PTPN11-202ENST00000392597 TDRD3Q9H7E2 651 aaKnown RBP22.79■■□□□ 1.24
PTPN11-202ENST00000392597 TXLNAP40222 546 aa22.78■■□□□ 1.24
PTPN11-202ENST00000392597 E2F4Q16254 413 aa22.78■■□□□ 1.24
PTPN11-202ENST00000392597 ARHGAP27Q6ZUM4 889 aa22.78■■□□□ 1.24
PTPN11-202ENST00000392597 TMEM179Q6ZVK1 233 aa22.78■■□□□ 1.24
PTPN11-202ENST00000392597 REXO1Q8N1G1 1221 aaKnown RBP22.78■■□□□ 1.24
PTPN11-202ENST00000392597 PAGE5Q96GU1 130 aa22.78■■□□□ 1.24
PTPN11-202ENST00000392597 ZNF277Q9NRM2 450 aaPredicted RBP22.78■■□□□ 1.24
PTPN11-202ENST00000392597 PTGS1P23219 599 aa22.77■■□□□ 1.24
PTPN11-202ENST00000392597 DTHD1Q6ZMT9 781 aa22.77■■□□□ 1.24
PTPN11-202ENST00000392597 LARGE2Q8N3Y3 721 aa22.77■■□□□ 1.24
PTPN11-202ENST00000392597 DCAF4Q8WV16 495 aa22.77■■□□□ 1.24
PTPN11-202ENST00000392597 MTMR8Q96EF0 704 aa22.77■■□□□ 1.24
PTPN11-202ENST00000392597 PRMT6Q96LA8 375 aaPredicted RBP22.77■■□□□ 1.24
PTPN11-202ENST00000392597 GMLQ99445 158 aa22.77■■□□□ 1.24
PTPN11-202ENST00000392597 JMJD4Q9H9V9 463 aa22.77■■□□□ 1.24
PTPN11-202ENST00000392597 GPCPD1Q9NPB8 672 aa22.77■■□□□ 1.24
PTPN11-202ENST00000392597 RASSF7Q02833 373 aa22.77■■□□□ 1.24
PTPN11-202ENST00000392597 ADGRF4Q8IZF3 695 aa22.77■■□□□ 1.24
PTPN11-202ENST00000392597 GSDMAQ96QA5 445 aa22.77■■□□□ 1.24
PTPN11-202ENST00000392597 TMOD2Q9NZR1 351 aa22.77■■□□□ 1.24
PTPN11-202ENST00000392597 HDAC9Q9UKV0 1011 aa22.77■■□□□ 1.24
PTPN11-202ENST00000392597 SPDYE2BA6NHP3 402 aa22.76■■□□□ 1.23
PTPN11-202ENST00000392597 SPDYE6P0CI01 402 aa22.76■■□□□ 1.23
PTPN11-202ENST00000392597 NEK8Q86SG6 692 aa22.76■■□□□ 1.23
PTPN11-202ENST00000392597 GRAMD1CQ8IYS0 662 aa22.76■■□□□ 1.23
PTPN11-202ENST00000392597 NEMFO60524 1076 aa22.75■■□□□ 1.23
PTPN11-202ENST00000392597 ADCY7P51828 1080 aa22.75■■□□□ 1.23
PTPN11-202ENST00000392597 ATP2B2Q01814 1243 aa22.75■■□□□ 1.23
PTPN11-202ENST00000392597 DPYDQ12882 1025 aa22.75■■□□□ 1.23
PTPN11-202ENST00000392597 CCDC96Q2M329 555 aa22.75■■□□□ 1.23
PTPN11-202ENST00000392597 HSD3B7Q9H2F3 369 aa22.75■■□□□ 1.23
PTPN11-202ENST00000392597 EEF2P13639 858 aaKnown RBP22.75■■□□□ 1.23
PTPN11-202ENST00000392597 PDXDC2PQ6P474 469 aa22.75■■□□□ 1.23
PTPN11-202ENST00000392597 KIAA1524Q8TCG1 905 aa22.75■■□□□ 1.23
PTPN11-202ENST00000392597 TMEM60Q9H2L4 133 aa22.75■■□□□ 1.23
PTPN11-202ENST00000392597 SPTLC3Q9NUV7 552 aa22.75■■□□□ 1.23
PTPN11-202ENST00000392597 NRBP1Q9UHY1 535 aa22.75■■□□□ 1.23
PTPN11-202ENST00000392597 SYNPO2Q9UMS6 1093 aa22.75■■□□□ 1.23
PTPN11-202ENST00000392597 SBF1O95248 1867 aa22.75■■□□□ 1.23
PTPN11-202ENST00000392597 PSMD14O00487 310 aa22.74■■□□□ 1.23
PTPN11-202ENST00000392597 ZBTB5O15062 677 aa22.74■■□□□ 1.23
PTPN11-202ENST00000392597 ABCB5Q2M3G0 1257 aa22.74■■□□□ 1.23
PTPN11-202ENST00000392597 AK8Q96MA6 479 aa22.74■■□□□ 1.23
PTPN11-202ENST00000392597 IMPACTQ9P2X3 320 aa22.74■■□□□ 1.23
PTPN11-202ENST00000392597 HERC5Q9UII4 1024 aaKnown RBP22.74■■□□□ 1.23
PTPN11-202ENST00000392597 COL4A5P29400 1685 aa22.73■■□□□ 1.23
PTPN11-202ENST00000392597 FAM196BA6NMK8 535 aa22.73■■□□□ 1.23
PTPN11-202ENST00000392597 ERCC5P28715 1186 aaPredicted RBP22.73■■□□□ 1.23
PTPN11-202ENST00000392597 ICA1Q05084 483 aa22.73■■□□□ 1.23
PTPN11-202ENST00000392597 OGFOD1Q8N543 542 aa22.73■■□□□ 1.23
PTPN11-202ENST00000392597 ENOX1Q8TC92 643 aaKnown RBP22.73■■□□□ 1.23
PTPN11-202ENST00000392597 CCSER1Q9C0I3 900 aa22.73■■□□□ 1.23
PTPN11-202ENST00000392597 RIC8AQ9NPQ8 531 aa22.73■■□□□ 1.23
PTPN11-202ENST00000392597 OR52Z1P0C646 297 aa22.73■■□□□ 1.23
PTPN11-202ENST00000392597 SLURP2P0DP57 97 aa22.73■■□□□ 1.23
PTPN11-202ENST00000392597 LMNB1P20700 586 aa22.73■■□□□ 1.23
PTPN11-202ENST00000392597 LMOD1P29536 600 aaPredicted RBP22.73■■□□□ 1.23
PTPN11-202ENST00000392597 AFMP43652 599 aa22.73■■□□□ 1.23
PTPN11-202ENST00000392597 DHX8Q14562 1220 aaKnown RBP22.73■■□□□ 1.23
PTPN11-202ENST00000392597 NOLC1Q14978 699 aaKnown RBP eCLIP22.73■■□□□ 1.23
PTPN11-202ENST00000392597 TTBK2Q6IQ55 1244 aa22.73■■□□□ 1.23
PTPN11-202ENST00000392597 GMCL1P1Q8NEA9 526 aa22.73■■□□□ 1.23
PTPN11-202ENST00000392597 COA7Q96BR5 231 aa22.73■■□□□ 1.23
PTPN11-202ENST00000392597 GLT8D2Q9H1C3 349 aa22.73■■□□□ 1.23
PTPN11-202ENST00000392597 ZNRF3Q9ULT6 936 aa22.73■■□□□ 1.23
PTPN11-202ENST00000392597 CBFA2T2O43439 604 aa22.72■■□□□ 1.23
PTPN11-202ENST00000392597 RAD17O75943 681 aa22.72■■□□□ 1.23
PTPN11-202ENST00000392597 PRELPP51888 382 aa22.72■■□□□ 1.23
PTPN11-202ENST00000392597 GSDMDP57764 484 aa22.72■■□□□ 1.23
PTPN11-202ENST00000392597 FANCCQ00597 558 aa22.72■■□□□ 1.23
PTPN11-202ENST00000392597 SEPT2Q15019 361 aa22.72■■□□□ 1.23
PTPN11-202ENST00000392597 DLGAP5Q15398 846 aa22.72■■□□□ 1.23
PTPN11-202ENST00000392597 CCDC144BQ3MJ40 725 aa22.72■■□□□ 1.23
PTPN11-202ENST00000392597 FKBP1CQ5VVH2 108 aa22.72■■□□□ 1.23
PTPN11-202ENST00000392597 MTMR14Q8NCE2 650 aa22.72■■□□□ 1.23
PTPN11-202ENST00000392597 AGBL3Q8NEM8 1001 aa22.72■■□□□ 1.23
PTPN11-202ENST00000392597 TBCKQ8TEA7 893 aa22.72■■□□□ 1.23
PTPN11-202ENST00000392597 CSRNP1Q96S65 589 aa22.72■■□□□ 1.23
PTPN11-202ENST00000392597 XPO4Q9C0E2 1151 aaKnown RBP22.72■■□□□ 1.23
PTPN11-202ENST00000392597 IFNKQ9P0W0 207 aa22.72■■□□□ 1.23
PTPN11-202ENST00000392597 BIN2Q9UBW5 565 aaPredicted RBP22.72■■□□□ 1.23
PTPN11-202ENST00000392597 DICER1Q9UPY3 1922 aaKnown RBP22.72■■□□□ 1.23
PTPN11-202ENST00000392597 GTPBP6O43824 516 aaPredicted RBP22.71■■□□□ 1.23
PTPN11-202ENST00000392597 CCNT1O60563 726 aaKnown RBP22.71■■□□□ 1.23
PTPN11-202ENST00000392597 SLC1A4P43007 532 aa22.71■■□□□ 1.23
PTPN11-202ENST00000392597 LETM2Q2VYF4 491 aa22.71■■□□□ 1.23
PTPN11-202ENST00000392597 SLFN13Q68D06 897 aa22.71■■□□□ 1.23
PTPN11-202ENST00000392597 KCTD1Q719H9 257 aa22.71■■□□□ 1.23
PTPN11-202ENST00000392597 SIAH1Q8IUQ4 282 aa22.71■■□□□ 1.23
PTPN11-202ENST00000392597 JDP2Q8WYK2 163 aa22.71■■□□□ 1.23
PTPN11-202ENST00000392597 DISC1Q9NRI5 854 aa22.71■■□□□ 1.23
PTPN11-202ENST00000392597 RBM26Q5T8P6 1007 aaKnown RBP22.71■■□□□ 1.23
PTPN11-202ENST00000392597 JAKMIP3Q5VZ66 844 aa22.71■■□□□ 1.23
PTPN11-202ENST00000392597 NIM1KQ8IY84 436 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms