RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 DPYDQ12882 1025 aa16.35■□□□□ 0.21
VPS9D1-201ENST00000389386 KIF6Q6ZMV9 814 aa16.35■□□□□ 0.21
VPS9D1-201ENST00000389386 ZNF572Q7Z3I7 529 aaPredicted RBP16.35■□□□□ 0.21
VPS9D1-201ENST00000389386 ISCA1Q9BUE6 129 aa16.35■□□□□ 0.21
VPS9D1-201ENST00000389386 LACRTQ9GZZ8 138 aa16.35■□□□□ 0.21
VPS9D1-201ENST00000389386 ZBTB1Q9Y2K1 713 aa16.35■□□□□ 0.21
VPS9D1-201ENST00000389386 BCL9O00512 1426 aa16.35■□□□□ 0.21
VPS9D1-201ENST00000389386 DDX60Q8IY21 1712 aaKnown RBP16.35■□□□□ 0.21
VPS9D1-201ENST00000389386 RCCD1A6NED2 376 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 SRRM3A6NNA2 597 aaPredicted RBP16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 KRT86O43790 486 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 PI16Q6UXB8 463 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 RALYLQ86SE5 291 aaKnown RBP16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 IQCKQ8N0W5 287 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 JADE2Q9NQC1 790 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 SRPRBQ9Y5M8 271 aaKnown RBP16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 WNK3Q9BYP7 1800 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 TJP1Q07157 1748 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 NUP188Q5SRE5 1749 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 TTC26A0AVF1 554 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 COBLO75128 1261 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 RXRAP19793 462 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 CASP1P29466 404 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 MDH1P40925 334 aaKnown RBP16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 IL15P40933 162 aaPredicted RBP16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 MRPS25P82663 173 aaKnown RBP16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 SLC7A5Q01650 507 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 APBA1Q02410 837 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 E2F5Q15329 346 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 WDR59Q6PJI9 974 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 CCDC121Q6ZUS5 278 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 KIRREL3Q8IZU9 778 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 ZNF483Q8TF39 744 aaPredicted RBP16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 TAB2Q9NYJ8 693 aa16.34■□□□□ 0.21
VPS9D1-201ENST00000389386 ZNF233A6NK53 670 aa16.33■□□□□ 0.21
VPS9D1-201ENST00000389386 DNM1LO00429 736 aa16.33■□□□□ 0.21
VPS9D1-201ENST00000389386 STARD3NLO95772 234 aa16.33■□□□□ 0.21
VPS9D1-201ENST00000389386 IFIT1P09914 478 aaKnown RBP16.33■□□□□ 0.21
VPS9D1-201ENST00000389386 IDEP14735 1019 aa16.33■□□□□ 0.21
VPS9D1-201ENST00000389386 AFMP43652 599 aa16.33■□□□□ 0.21
VPS9D1-201ENST00000389386 KRT83P78385 493 aa16.33■□□□□ 0.21
VPS9D1-201ENST00000389386 TTF1Q15361 905 aaPredicted RBP16.33■□□□□ 0.21
VPS9D1-201ENST00000389386 NTRK3Q16288 839 aa16.33■□□□□ 0.21
VPS9D1-201ENST00000389386 SH3RF1Q7Z6J0 888 aa16.33■□□□□ 0.21
VPS9D1-201ENST00000389386 KIAA1328Q86T90 577 aa16.33■□□□□ 0.21
VPS9D1-201ENST00000389386 SCLT1Q96NL6 688 aa16.33■□□□□ 0.21
VPS9D1-201ENST00000389386 DNAJC7Q99615 494 aa16.33■□□□□ 0.21
VPS9D1-201ENST00000389386 BTBD18B2RXH4 712 aa16.33■□□□□ 0.2
VPS9D1-201ENST00000389386 UBE2Q2LH0YL09 131 aa16.33■□□□□ 0.2
VPS9D1-201ENST00000389386 SSBP05455 408 aaKnown RBP eCLIP16.33■□□□□ 0.2
VPS9D1-201ENST00000389386 NR1D1P20393 614 aa16.33■□□□□ 0.2
VPS9D1-201ENST00000389386 SLC8A3P57103 927 aa16.33■□□□□ 0.2
VPS9D1-201ENST00000389386 NAA25Q14CX7 972 aa16.33■□□□□ 0.2
VPS9D1-201ENST00000389386 PAGE5Q96GU1 130 aa16.33■□□□□ 0.2
VPS9D1-201ENST00000389386 CSRNP2Q9H175 543 aa16.33■□□□□ 0.2
VPS9D1-201ENST00000389386 CTNND2Q9UQB3 1225 aa16.33■□□□□ 0.2
VPS9D1-201ENST00000389386 DOT1LQ8TEK3 1739 aa16.33■□□□□ 0.2
VPS9D1-201ENST00000389386 UBN2Q6ZU65 1347 aa16.33■□□□□ 0.2
VPS9D1-201ENST00000389386 RANBP6O60518 1105 aaKnown RBP16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 TNFRSF8P28908 595 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 SLC8A1P32418 973 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 IARSP41252 1262 aaKnown RBP16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 MAB21L3Q8N8X9 362 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 ARMC2Q8NEN0 867 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 SPATA4Q8NEY3 305 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 GJD4Q96KN9 370 aaPredicted RBP16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 GSDMAQ96QA5 445 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 OSBPL7Q9BZF2 842 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 HAUS2Q9NVX0 235 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 STIM2Q9P246 746 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 CEP126Q9P2H0 1117 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 SNX12Q9UMY4 172 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 ANGEL1Q9UNK9 670 aaKnown RBP16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 A0A087X0B3 334 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 PPARAQ07869 468 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 SCARF1Q14162 830 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 SPRED3Q2MJR0 410 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 RCSD1Q6JBY9 416 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 PURBQ96QR8 312 aaKnown RBP16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 PLCD4Q9BRC7 762 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 DUSP10Q9Y6W6 482 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 ANKRD33BA6NCL7 494 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 SPAG1Q07617 926 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 TCP11X2Q5H9J9 407 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 CYFIP2Q96F07 1278 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 LUC7L2Q9Y383 392 aaKnown RBP16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 PCDHB6Q9Y5E3 794 aa16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.32■□□□□ 0.2
VPS9D1-201ENST00000389386 MYO5AQ9Y4I1 1855 aaKnown RBP16.31■□□□□ 0.2
VPS9D1-201ENST00000389386 E7EVH7 732 aa16.31■□□□□ 0.2
VPS9D1-201ENST00000389386 APOA5Q6Q788 366 aa16.31■□□□□ 0.2
VPS9D1-201ENST00000389386 QTRT2Q9H974 415 aaKnown RBP16.31■□□□□ 0.2
VPS9D1-201ENST00000389386 SKAP2O75563 359 aaPredicted RBP16.31■□□□□ 0.2
VPS9D1-201ENST00000389386 GBP2P32456 591 aaPredicted RBP16.31■□□□□ 0.2
VPS9D1-201ENST00000389386 UBXN1Q04323 297 aa16.31■□□□□ 0.2
VPS9D1-201ENST00000389386 RILPL1Q5EBL4 403 aa16.31■□□□□ 0.2
VPS9D1-201ENST00000389386 CFAP58Q5T655 872 aa16.31■□□□□ 0.2
VPS9D1-201ENST00000389386 HAUS3Q68CZ6 603 aa16.31■□□□□ 0.2
VPS9D1-201ENST00000389386 CD302Q8IX05 232 aa16.31■□□□□ 0.2
VPS9D1-201ENST00000389386 NKX2-3Q8TAU0 364 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms