RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 SMCHD1A6NHR9 2005 aa18.69■□□□□ 0.58
C11orf88-202ENST00000375618 RBBP6Q7Z6E9 1792 aaKnown RBP18.68■□□□□ 0.58
C11orf88-202ENST00000375618 REC8O95072 547 aa18.68■□□□□ 0.58
C11orf88-202ENST00000375618 FDX1P10109 184 aa18.68■□□□□ 0.58
C11orf88-202ENST00000375618 CPA1P15085 419 aa18.68■□□□□ 0.58
C11orf88-202ENST00000375618 ZKSCAN1P17029 563 aaPredicted RBP18.68■□□□□ 0.58
C11orf88-202ENST00000375618 MCM5P33992 734 aa18.68■□□□□ 0.58
C11orf88-202ENST00000375618 EXOSC10Q01780 885 aaKnown RBP18.68■□□□□ 0.58
C11orf88-202ENST00000375618 GRM4Q14833 912 aa18.68■□□□□ 0.58
C11orf88-202ENST00000375618 MUM1L1Q5H9M0 696 aa18.68■□□□□ 0.58
C11orf88-202ENST00000375618 GPATCH4Q5T3I0 446 aaKnown RBP18.68■□□□□ 0.58
C11orf88-202ENST00000375618 MAP3K21Q5TCX8 1036 aa18.68■□□□□ 0.58
C11orf88-202ENST00000375618 FGD4Q96M96 766 aa18.68■□□□□ 0.58
C11orf88-202ENST00000375618 NEK1Q96PY6 1258 aa18.68■□□□□ 0.58
C11orf88-202ENST00000375618 USP26Q9BXU7 913 aa18.68■□□□□ 0.58
C11orf88-202ENST00000375618 BRCA2P51587 3418 aa18.67■□□□□ 0.58
C11orf88-202ENST00000375618 DNAJC25-GNG10A0A024R161 153 aa18.67■□□□□ 0.58
C11orf88-202ENST00000375618 PALM3A6NDB9 673 aaPredicted RBP18.67■□□□□ 0.58
C11orf88-202ENST00000375618 ICAM1P05362 532 aa18.67■□□□□ 0.58
C11orf88-202ENST00000375618 PARP1P09874 1014 aaKnown RBP18.67■□□□□ 0.58
C11orf88-202ENST00000375618 EN2P19622 333 aaPredicted RBP18.67■□□□□ 0.58
C11orf88-202ENST00000375618 COPB2P35606 906 aa18.67■□□□□ 0.58
C11orf88-202ENST00000375618 ZNF792Q3KQV3 632 aa18.67■□□□□ 0.58
C11orf88-202ENST00000375618 ASPRV1Q53RT3 343 aa18.67■□□□□ 0.58
C11orf88-202ENST00000375618 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.67■□□□□ 0.58
C11orf88-202ENST00000375618 DPP9Q86TI2 863 aa18.67■□□□□ 0.58
C11orf88-202ENST00000375618 ADGRF4Q8IZF3 695 aa18.67■□□□□ 0.58
C11orf88-202ENST00000375618 SHISA4Q96DD7 197 aa18.67■□□□□ 0.58
C11orf88-202ENST00000375618 TMEM87BQ96K49 555 aa18.67■□□□□ 0.58
C11orf88-202ENST00000375618 RNF146Q9NTX7 359 aa18.67■□□□□ 0.58
C11orf88-202ENST00000375618 ERICH2A1L162 156 aa18.66■□□□□ 0.58
C11orf88-202ENST00000375618 ALAS1P13196 640 aa18.66■□□□□ 0.58
C11orf88-202ENST00000375618 CYP2C19P33261 490 aa18.66■□□□□ 0.58
C11orf88-202ENST00000375618 UBXN2AP68543 259 aa18.66■□□□□ 0.58
C11orf88-202ENST00000375618 CACNB2Q08289 660 aaPredicted RBP18.66■□□□□ 0.58
C11orf88-202ENST00000375618 KCTD2Q14681 263 aa18.66■□□□□ 0.58
C11orf88-202ENST00000375618 SART3Q15020 963 aaKnown RBP18.66■□□□□ 0.58
C11orf88-202ENST00000375618 RAB11FIP4Q86YS3 637 aa18.66■□□□□ 0.58
C11orf88-202ENST00000375618 TRPV1Q8NER1 839 aa18.66■□□□□ 0.58
C11orf88-202ENST00000375618 MTA3Q9BTC8 594 aa18.66■□□□□ 0.58
C11orf88-202ENST00000375618 CCPG1Q9ULG6 757 aa18.66■□□□□ 0.58
C11orf88-202ENST00000375618 ZNFX1Q9P2E3 1918 aaKnown RBP18.66■□□□□ 0.58
C11orf88-202ENST00000375618 KLRF2D3W0D1 207 aa18.65■□□□□ 0.58
C11orf88-202ENST00000375618 PRKAR2AP13861 404 aaKnown RBP18.65■□□□□ 0.58
C11orf88-202ENST00000375618 CCND3P30281 292 aaPredicted RBP18.65■□□□□ 0.58
C11orf88-202ENST00000375618 RGS19P49795 217 aa18.65■□□□□ 0.58
C11orf88-202ENST00000375618 ZNF654Q8IZM8 581 aa18.65■□□□□ 0.58
C11orf88-202ENST00000375618 CHST13Q8NET6 341 aa18.65■□□□□ 0.58
C11orf88-202ENST00000375618 CLEC4DQ8WXI8 215 aa18.65■□□□□ 0.58
C11orf88-202ENST00000375618 MAML3Q96JK9 1138 aa18.65■□□□□ 0.58
C11orf88-202ENST00000375618 TRERF1Q96PN7 1200 aa18.65■□□□□ 0.58
C11orf88-202ENST00000375618 RNF208Q9H0X6 261 aa18.65■□□□□ 0.58
C11orf88-202ENST00000375618 JMJD4Q9H9V9 463 aa18.65■□□□□ 0.58
C11orf88-202ENST00000375618 A1CFQ9NQ94 594 aaKnown RBP18.65■□□□□ 0.58
C11orf88-202ENST00000375618 PAK6Q9NQU5 681 aaPredicted RBP18.65■□□□□ 0.58
C11orf88-202ENST00000375618 CYTH3O43739 400 aa18.64■□□□□ 0.57
C11orf88-202ENST00000375618 SEC24BO95487 1268 aa18.64■□□□□ 0.57
C11orf88-202ENST00000375618 RXRAP19793 462 aa18.64■□□□□ 0.57
C11orf88-202ENST00000375618 CDC37Q16543 378 aaPredicted RBP18.64■□□□□ 0.57
C11orf88-202ENST00000375618 OLFML2BQ68BL8 750 aa18.64■□□□□ 0.57
C11orf88-202ENST00000375618 DHX32Q7L7V1 743 aaKnown RBP18.64■□□□□ 0.57
C11orf88-202ENST00000375618 JAKMIP1Q96N16 626 aaKnown RBP18.64■□□□□ 0.57
C11orf88-202ENST00000375618 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.64■□□□□ 0.57
C11orf88-202ENST00000375618 ACAD9Q9H845 621 aa18.64■□□□□ 0.57
C11orf88-202ENST00000375618 VAT1LQ9HCJ6 419 aa18.64■□□□□ 0.57
C11orf88-202ENST00000375618 PLXNA1Q9UIW2 1896 aa18.63■□□□□ 0.57
C11orf88-202ENST00000375618 NFIBO00712 420 aa18.63■□□□□ 0.57
C11orf88-202ENST00000375618 PPP1R11O60927 126 aaPredicted RBP18.63■□□□□ 0.57
C11orf88-202ENST00000375618 GJB1P08034 283 aa18.63■□□□□ 0.57
C11orf88-202ENST00000375618 LIFRP42702 1097 aa18.63■□□□□ 0.57
C11orf88-202ENST00000375618 CNTN2Q02246 1040 aa18.63■□□□□ 0.57
C11orf88-202ENST00000375618 KRT32Q14532 448 aa18.63■□□□□ 0.57
C11orf88-202ENST00000375618 QRICH1Q2TAL8 776 aa18.63■□□□□ 0.57
C11orf88-202ENST00000375618 TKFCQ3LXA3 575 aa18.63■□□□□ 0.57
C11orf88-202ENST00000375618 CATIPQ7Z7H3 387 aa18.63■□□□□ 0.57
C11orf88-202ENST00000375618 TRMT44Q8IYL2 757 aaKnown RBP18.63■□□□□ 0.57
C11orf88-202ENST00000375618 NUP133Q8WUM0 1156 aa18.63■□□□□ 0.57
C11orf88-202ENST00000375618 MTMR8Q96EF0 704 aa18.63■□□□□ 0.57
C11orf88-202ENST00000375618 DEFB118Q96PH6 123 aa18.63■□□□□ 0.57
C11orf88-202ENST00000375618 PURBQ96QR8 312 aaKnown RBP18.63■□□□□ 0.57
C11orf88-202ENST00000375618 TMEM106CQ9BVX2 250 aa18.63■□□□□ 0.57
C11orf88-202ENST00000375618 FBXO40Q9UH90 709 aa18.63■□□□□ 0.57
C11orf88-202ENST00000375618 BRPF3Q9ULD4 1205 aa18.63■□□□□ 0.57
C11orf88-202ENST00000375618 ASTN1O14525 1302 aa18.63■□□□□ 0.57
C11orf88-202ENST00000375618 WDR19Q8NEZ3 1342 aa18.63■□□□□ 0.57
C11orf88-202ENST00000375618 LCTP09848 1927 aa18.62■□□□□ 0.57
C11orf88-202ENST00000375618 EPB41L2O43491 1005 aaKnown RBP18.62■□□□□ 0.57
C11orf88-202ENST00000375618 DDAH1O94760 285 aa18.62■□□□□ 0.57
C11orf88-202ENST00000375618 PRAMEF19Q5SWL8 479 aa18.62■□□□□ 0.57
C11orf88-202ENST00000375618 NFXL1Q6ZNB6 911 aa18.62■□□□□ 0.57
C11orf88-202ENST00000375618 SGMS1Q86VZ5 419 aa18.62■□□□□ 0.57
C11orf88-202ENST00000375618 ANKRD35Q8N283 1001 aa18.62■□□□□ 0.57
C11orf88-202ENST00000375618 U2AF1L4Q8WU68 220 aaKnown RBP18.62■□□□□ 0.57
C11orf88-202ENST00000375618 DDX11Q96FC9 970 aa18.62■□□□□ 0.57
C11orf88-202ENST00000375618 DDX49Q9Y6V7 483 aaKnown RBP18.62■□□□□ 0.57
C11orf88-202ENST00000375618 RPTORQ8N122 1335 aa18.62■□□□□ 0.57
C11orf88-202ENST00000375618 KIAA0100Q14667 2235 aaKnown RBP18.61■□□□□ 0.57
C11orf88-202ENST00000375618 PLEKHA8P1O95397 391 aa18.61■□□□□ 0.57
C11orf88-202ENST00000375618 CYBAP13498 195 aa18.61■□□□□ 0.57
C11orf88-202ENST00000375618 GJA8P48165 433 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms