RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 GSG1L2A8MUP6 293 aa13.59□□□□□ -0.23
C9orf3-203ENST00000375315 SRGNP10124 158 aa13.59□□□□□ -0.23
C9orf3-203ENST00000375315 DPP8Q6V1X1 898 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-203ENST00000375315 NFXL1Q6ZNB6 911 aa13.59□□□□□ -0.23
C9orf3-203ENST00000375315 BRIP1Q9BX63 1249 aa13.59□□□□□ -0.23
C9orf3-203ENST00000375315 COL1A1P02452 1464 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-203ENST00000375315 SCNN1DP51172 638 aa13.58□□□□□ -0.24
C9orf3-203ENST00000375315 ATP2B2Q01814 1243 aa13.58□□□□□ -0.24
C9orf3-203ENST00000375315 HSP90AA4PQ58FG1 418 aa13.58□□□□□ -0.24
C9orf3-203ENST00000375315 TMED8Q6PL24 325 aaPredicted RBP13.58□□□□□ -0.24
C9orf3-203ENST00000375315 ZNF804AQ7Z570 1209 aa13.58□□□□□ -0.24
C9orf3-203ENST00000375315 CEP57Q86XR8 500 aa13.58□□□□□ -0.24
C9orf3-203ENST00000375315 SAP30BPQ9UHR5 308 aaKnown RBP13.58□□□□□ -0.24
C9orf3-203ENST00000375315 H0YIN7 160 aa13.58□□□□□ -0.24
C9orf3-203ENST00000375315 AGPSO00116 658 aa13.58□□□□□ -0.24
C9orf3-203ENST00000375315 OPA1O60313 960 aa13.58□□□□□ -0.24
C9orf3-203ENST00000375315 LDHBP07195 334 aaKnown RBP13.58□□□□□ -0.24
C9orf3-203ENST00000375315 CYP2D6P10635 497 aa13.58□□□□□ -0.24
C9orf3-203ENST00000375315 MFSD14BQ5SR56 506 aa13.58□□□□□ -0.24
C9orf3-203ENST00000375315 NCAPH2Q6IBW4 605 aa13.58□□□□□ -0.24
C9orf3-203ENST00000375315 BRAPQ7Z569 592 aa13.58□□□□□ -0.24
C9orf3-203ENST00000375315 SH3GL2Q99962 352 aa13.58□□□□□ -0.24
C9orf3-203ENST00000375315 SELENOOQ9BVL4 669 aa13.58□□□□□ -0.24
C9orf3-203ENST00000375315 VCPKMTQ9H867 229 aa13.58□□□□□ -0.24
C9orf3-203ENST00000375315 CD209Q9NNX6 404 aa13.58□□□□□ -0.24
C9orf3-203ENST00000375315 POLR3DP05423 398 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-203ENST00000375315 PNOCQ13519 176 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 SNCBQ16143 134 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 AP1ARQ63HQ0 302 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 MICU3Q86XE3 530 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 ZNF512BQ96KM6 892 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-203ENST00000375315 LY75O60449 1722 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 KLF18A0A0U1RQI7 1052 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 BBOX1O75936 387 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 CRY2Q49AN0 593 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 RNF187Q5TA31 235 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-203ENST00000375315 MYSM1Q5VVJ2 828 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 CYB5R4Q7L1T6 521 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 ARMC2Q8NEN0 867 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 RPGRIP1Q96KN7 1286 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 SPATS2LQ9NUQ6 558 aaKnown RBP13.57□□□□□ -0.24
C9orf3-203ENST00000375315 DACH1Q9UI36 760 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 NFE2L3Q9Y4A8 694 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 SALL1Q9NSC2 1324 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 USP17L12C9JPN9 530 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 USP17L21D6R901 530 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 RANBP6O60518 1105 aaKnown RBP13.57□□□□□ -0.24
C9orf3-203ENST00000375315 ACTN3Q08043 901 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-203ENST00000375315 ANO1Q5XXA6 986 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 CMTR1Q8N1G2 835 aaKnown RBP13.57□□□□□ -0.24
C9orf3-203ENST00000375315 NCOA7Q8NI08 942 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 NSUN4Q96CB9 384 aaKnown RBP13.57□□□□□ -0.24
C9orf3-203ENST00000375315 GDAP1L1Q96MZ0 367 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 NACAP1Q9BZK3 213 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 NBPF3Q9H094 633 aa13.57□□□□□ -0.24
C9orf3-203ENST00000375315 TNRC6CQ9HCJ0 1690 aaKnown RBP13.57□□□□□ -0.24
C9orf3-203ENST00000375315 A0A0U1RQJ8 604 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 GOLGA6L7A0A1B0GV03 622 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 IBSPP21815 317 aaPredicted RBP13.56□□□□□ -0.24
C9orf3-203ENST00000375315 PDE6BP35913 854 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 SKOR1P84550 965 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 OTUD7BQ6GQQ9 843 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 FLAD1Q8NFF5 587 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 ATRIPQ8WXE1 791 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 CALR3Q96L12 384 aaKnown RBP13.56□□□□□ -0.24
C9orf3-203ENST00000375315 GJB4Q9NTQ9 266 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 LEMD3Q9Y2U8 911 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 C4AP0C0L4 1744 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 RTN2O75298 545 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 RASSF9O75901 435 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 ECM2O94769 699 aaPredicted RBP13.56□□□□□ -0.24
C9orf3-203ENST00000375315 AMPD2Q01433 879 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 TBC1D8BQ0IIM8 1120 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 GRIK3Q13003 919 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 PICALMQ13492 652 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 MAPKAPK5Q8IW41 473 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 CNKSR2Q8WXI2 1034 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 SH3GL3Q99963 347 aa13.56□□□□□ -0.24
C9orf3-203ENST00000375315 GOLGA8BA8MQT2 603 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 ZNF18P17022 549 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 CKAP4Q07065 602 aaKnown RBP13.55□□□□□ -0.24
C9orf3-203ENST00000375315 NAA25Q14CX7 972 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 R3HDM1Q15032 1099 aaKnown RBP13.55□□□□□ -0.24
C9orf3-203ENST00000375315 CCDC70Q6NSX1 233 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 FAM43BQ6ZT52 329 aaPredicted RBP13.55□□□□□ -0.24
C9orf3-203ENST00000375315 NUP133Q8WUM0 1156 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 C8orf76Q96K31 380 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 RUFY1Q96T51 708 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 PAGR1Q9BTK6 254 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 MCM9Q9NXL9 1143 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 TACC3Q9Y6A5 838 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 USP17L8P0C7I0 530 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 RBM5P52756 815 aaKnown RBP eCLIP13.55□□□□□ -0.242e-7■■■■□ 26.1
C9orf3-203ENST00000375315 DRP2Q13474 957 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 MFSD6Q6ZSS7 791 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 ENOX1Q8TC92 643 aaKnown RBP13.55□□□□□ -0.24
C9orf3-203ENST00000375315 MAGEC3Q8TD91 643 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 TGFBRAP1Q8WUH2 860 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 AKAP11Q9UKA4 1901 aa13.55□□□□□ -0.24
C9orf3-203ENST00000375315 BCORQ6W2J9 1755 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms