RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 SNCBQ16143 134 aa23.28■■□□□ 1.32
TGFBR1-202ENST00000374994 PPP1R12CQ9BZL4 782 aa23.28■■□□□ 1.32
TGFBR1-202ENST00000374994 FTOQ9C0B1 505 aaKnown RBP eCLIP23.28■■□□□ 1.321e-7■□□□□ 8.2
TGFBR1-202ENST00000374994 USP6P35125 1406 aa23.28■■□□□ 1.32
TGFBR1-202ENST00000374994 TTLL7Q6ZT98 887 aa23.28■■□□□ 1.32
TGFBR1-202ENST00000374994 PANK4Q9NVE7 773 aa23.28■■□□□ 1.32
TGFBR1-202ENST00000374994 MAPKAPK5Q8IW41 473 aa23.28■■□□□ 1.32
TGFBR1-202ENST00000374994 PROSER3Q2NL68 480 aa23.27■■□□□ 1.32
TGFBR1-202ENST00000374994 PHLDB3Q6NSJ2 640 aa23.27■■□□□ 1.32
TGFBR1-202ENST00000374994 MAN2A1Q16706 1144 aa23.27■■□□□ 1.32
TGFBR1-202ENST00000374994 TRAPPC3LQ5T215 181 aa23.27■■□□□ 1.32
TGFBR1-202ENST00000374994 CCDC97Q96F63 343 aaPredicted RBP23.27■■□□□ 1.32
TGFBR1-202ENST00000374994 PCDHA12Q9UN75 941 aa23.27■■□□□ 1.32
TGFBR1-202ENST00000374994 DCUN1D2Q6PH85 259 aa23.27■■□□□ 1.32
TGFBR1-202ENST00000374994 CYP2E1P05181 493 aaPredicted RBP23.27■■□□□ 1.32
TGFBR1-202ENST00000374994 CASP8Q14790 479 aa23.27■■□□□ 1.32
TGFBR1-202ENST00000374994 ADAM9Q13443 819 aa23.27■■□□□ 1.32
TGFBR1-202ENST00000374994 COL4A3BPQ9Y5P4 624 aa23.27■■□□□ 1.32
TGFBR1-202ENST00000374994 KLRF2D3W0D1 207 aa23.26■■□□□ 1.31
TGFBR1-202ENST00000374994 ITIH3Q06033 890 aa23.26■■□□□ 1.31
TGFBR1-202ENST00000374994 EFCC1Q9HA90 598 aa23.26■■□□□ 1.31
TGFBR1-202ENST00000374994 ADD2P35612 726 aa23.26■■□□□ 1.31
TGFBR1-202ENST00000374994 EIF6P56537 245 aaKnown RBP23.26■■□□□ 1.31
TGFBR1-202ENST00000374994 RPS8P62241 208 aaKnown RBP23.26■■□□□ 1.31
TGFBR1-202ENST00000374994 ZDHHC9Q9Y397 364 aa23.26■■□□□ 1.31
TGFBR1-202ENST00000374994 M0R2C6 588 aa23.26■■□□□ 1.31
TGFBR1-202ENST00000374994 TGFBRAP1Q8WUH2 860 aa23.26■■□□□ 1.31
TGFBR1-202ENST00000374994 BCAP29Q9UHQ4 241 aa23.26■■□□□ 1.31
TGFBR1-202ENST00000374994 LUC7L3O95232 432 aaKnown RBP23.26■■□□□ 1.31
TGFBR1-202ENST00000374994 TRPC3Q13507 836 aa23.26■■□□□ 1.31
TGFBR1-202ENST00000374994 ERCC3P19447 782 aa23.26■■□□□ 1.31
TGFBR1-202ENST00000374994 GNPATO15228 680 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 SLC39A2Q9NP94 309 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 ARHGAP44Q17R89 818 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 ATP10DQ9P241 1426 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 PCDHA4Q9UN74 947 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 RIPOR2Q9Y4F9 1068 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 NDUFA10O95299 355 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 PTPN12Q05209 780 aaKnown RBP23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 PASKQ96RG2 1323 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 hCG_1984214I3L0E3 225 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 STK10O94804 968 aaKnown RBP23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 SASH1O94885 1247 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 HEXIM1O94992 359 aaKnown RBP23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 MAN1A1P33908 653 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 TTLL12Q14166 644 aaPredicted RBP23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 RBM26Q5T8P6 1007 aaKnown RBP23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 EMBQ6PCB8 327 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 ZNF713Q8N859 430 aaPredicted RBP23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 CCDC197Q8NCU1 140 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 BTG4Q9NY30 223 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 TFCP2L1Q9NZI6 479 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 ENC1O14682 589 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 RIMBP2O15034 1052 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 PSMC4P43686 418 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 EHHADHQ08426 723 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 ANKRD42Q8N9B4 389 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 VPS37BQ9H9H4 285 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 STK17AQ9UEE5 414 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 VGLL3A8MV65 326 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 VEZTQ9HBM0 779 aa23.25■■□□□ 1.31
TGFBR1-202ENST00000374994 WHAMMQ8TF30 809 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 SAMSN1Q9NSI8 373 aaKnown RBP23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 CCNE1P24864 410 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 PHBP35232 272 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 GPIHBP1Q8IV16 184 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 CNOT10Q9H9A5 744 aaKnown RBP23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 WDR19Q8NEZ3 1342 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 TRPM1Q7Z4N2 1603 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 SOWAHDA6NJG2 315 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 LMNB1P20700 586 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 HSPA1LP34931 641 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 MAP3K15Q6ZN16 1313 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 SHROOM2Q13796 1616 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 MFAP3LO75121 409 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 RASSF7Q02833 373 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 GOLGA8FQ08AF8 430 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 GOLGA8DPQ0D2H9 430 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 SEPT6Q14141 434 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 C10orf76Q5T2E6 689 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 REREQ9P2R6 1566 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 PRPF3O43395 683 aaKnown RBP23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 RAD51AP2Q09MP3 1159 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 TOB2Q14106 344 aaPredicted RBP23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 KRT12Q99456 494 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 DPH5Q9H2P9 285 aa23.24■■□□□ 1.31
TGFBR1-202ENST00000374994 HSPA6P17066 643 aa23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 IRX4P78413 519 aa23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 GABPB2Q8TAK5 448 aaPredicted RBP23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 ACTR5Q9H9F9 607 aaPredicted RBP23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 SUN1O94901 812 aa23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 RESP18Q5W5W9 173 aa23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 DPH6Q7L8W6 267 aa23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 SDR42E1Q8WUS8 393 aa23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 TBC1D8O95759 1140 aa23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 ABCB4P21439 1286 aa23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 MAP3K21Q5TCX8 1036 aa23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 LARP4BQ92615 738 aaKnown RBP23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 PSTPIP2Q9H939 334 aa23.23■■□□□ 1.31
TGFBR1-202ENST00000374994 ARL6IP4Q66PJ3 421 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms