RNA–Protein interactions for RNA: ENST00000368916.1

GABPB2-201, Transcript of GA binding protein transcription factor subunit beta 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GABPB2, Length 1,680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB2-201ENST00000368916 CCDC47Q96A33 483 aaKnown RBP8.3□□□□□ -1.08
GABPB2-201ENST00000368916 ZBTB9Q96C00 473 aa8.3□□□□□ -1.08
GABPB2-201ENST00000368916 CCDC114Q96M63 670 aa8.3□□□□□ -1.08
GABPB2-201ENST00000368916 SEC62Q99442 399 aaKnown RBP8.3□□□□□ -1.08
GABPB2-201ENST00000368916 CDC5LQ99459 802 aaKnown RBP8.3□□□□□ -1.08
GABPB2-201ENST00000368916 CNOT10Q9H9A5 744 aaKnown RBP8.3□□□□□ -1.08
GABPB2-201ENST00000368916 TLR7Q9NYK1 1049 aaKnown RBP8.3□□□□□ -1.08
GABPB2-201ENST00000368916 FBXO2Q9UK22 296 aaPredicted RBP8.3□□□□□ -1.08
GABPB2-201ENST00000368916 GUCA1BQ9UMX6 200 aa8.3□□□□□ -1.08
GABPB2-201ENST00000368916 SNX12Q9UMY4 172 aa8.3□□□□□ -1.08
GABPB2-201ENST00000368916 MST1RQ04912 1400 aa8.3□□□□□ -1.08
GABPB2-201ENST00000368916 PHRF1Q9P1Y6 1649 aaKnown RBP8.29□□□□□ -1.08
GABPB2-201ENST00000368916 KIF28PB7ZC32 967 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 CES2O00748 559 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 ZBTB43O43298 467 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 DNAJC8O75937 253 aaPredicted RBP8.29□□□□□ -1.08
GABPB2-201ENST00000368916 LUC7L3O95232 432 aaKnown RBP8.29□□□□□ -1.08
GABPB2-201ENST00000368916 DEXIO95424 95 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 FMNL1O95466 1100 aaPredicted RBP8.29□□□□□ -1.08
GABPB2-201ENST00000368916 MMP1P03956 469 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 IFIT1P09914 478 aaKnown RBP8.29□□□□□ -1.08
GABPB2-201ENST00000368916 COL9A1P20849 921 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 COPB1P53618 953 aaKnown RBP8.29□□□□□ -1.08
GABPB2-201ENST00000368916 TFCP2Q12800 502 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 MTMR3Q13615 1198 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 TCP11X2Q5H9J9 407 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 SPECC1Q5M775 1068 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 CCDC181Q5TID7 509 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 NCAPH2Q6IBW4 605 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 LMOD2Q6P5Q4 547 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 SND1Q7KZF4 910 aaKnown RBP eCLIP8.29□□□□□ -1.08
GABPB2-201ENST00000368916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.29□□□□□ -1.08
GABPB2-201ENST00000368916 CCDC13Q8IYE1 715 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 IQCKQ8N0W5 287 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 ANKS4BQ8N8V4 417 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 NGDNQ8NEJ9 315 aaKnown RBP8.29□□□□□ -1.08
GABPB2-201ENST00000368916 ZNF473Q8WTR7 871 aaKnown RBP8.29□□□□□ -1.08
GABPB2-201ENST00000368916 LRRC45Q96CN5 670 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 FAM210AQ96ND0 272 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 NEUROD6Q96NK8 337 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 CLIC6Q96NY7 704 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 CCT8L2Q96SF2 557 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 MMS19Q96T76 1030 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 ZBED2Q9BTP6 218 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 THAP9Q9H5L6 903 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 MAGEC2Q9UBF1 373 aaPredicted RBP8.29□□□□□ -1.08
GABPB2-201ENST00000368916 SERTAD1Q9UHV2 236 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 HYOU1Q9Y4L1 999 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 C4AP0C0L4 1744 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 C4BP0C0L5 1744 aa8.29□□□□□ -1.08
GABPB2-201ENST00000368916 PARP4Q9UKK3 1724 aaKnown RBP8.29□□□□□ -1.08
GABPB2-201ENST00000368916 MAST3O60307 1309 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 GMNCA6NCL1 334 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 NUTM2BA6NNL0 878 aaPredicted RBP8.28□□□□□ -1.08
GABPB2-201ENST00000368916 NUTM2EB1AL46 878 aaPredicted RBP8.28□□□□□ -1.08
GABPB2-201ENST00000368916 TEX33O43247 280 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 IDEP14735 1019 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 NR1D1P20393 614 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 CDC27P30260 824 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 GBP2P32456 591 aaPredicted RBP8.28□□□□□ -1.08
GABPB2-201ENST00000368916 FXR1P51114 621 aaKnown RBP eCLIP8.28□□□□□ -1.08
GABPB2-201ENST00000368916 ERVK-24P63145 666 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 ZBED6P86452 979 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 PAK1Q13153 545 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 SEPT2Q15019 361 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 RBBP5Q15291 538 aaKnown RBP8.28□□□□□ -1.08
GABPB2-201ENST00000368916 PTGISQ16647 500 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 CWF19L2Q2TBE0 894 aaKnown RBP8.28□□□□□ -1.08
GABPB2-201ENST00000368916 CFAP221Q4G0U5 840 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 GRIPAP1Q4V328 841 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 ZNF658Q5TYW1 1059 aaPredicted RBP8.28□□□□□ -1.08
GABPB2-201ENST00000368916 CYB5D1Q6P9G0 228 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 NLRP14Q86W24 1093 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 FUKQ8N0W3 1084 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 CENPTQ96BT3 561 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 ATP6V1G3Q96LB4 118 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 EDEM3Q9BZQ6 932 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 NUCKS1Q9H1E3 243 aaKnown RBP8.28□□□□□ -1.08
GABPB2-201ENST00000368916 JADE2Q9NQC1 790 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 STRN4Q9NRL3 753 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 BCL9LQ86UU0 1499 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 ARHGAP23Q9P227 1491 aa8.28□□□□□ -1.08
GABPB2-201ENST00000368916 ANKRD33BA6NCL7 494 aa8.27□□□□□ -1.08
GABPB2-201ENST00000368916 C5orf60A6NFR6 353 aa8.27□□□□□ -1.08
GABPB2-201ENST00000368916 PPP1R3GB7ZBB8 358 aa8.27□□□□□ -1.08
GABPB2-201ENST00000368916 ABLIM1O14639 778 aa8.27□□□□□ -1.08
GABPB2-201ENST00000368916 RNMTO43148 476 aaKnown RBP8.27□□□□□ -1.08
GABPB2-201ENST00000368916 MGRN1O60291 552 aa8.27□□□□□ -1.08
GABPB2-201ENST00000368916 PAEPP09466 180 aa8.27□□□□□ -1.08
GABPB2-201ENST00000368916 HNRNPH3P31942 346 aaKnown RBP8.27□□□□□ -1.08
GABPB2-201ENST00000368916 PRPHP41219 470 aa8.27□□□□□ -1.08
GABPB2-201ENST00000368916 TRAPPC10P48553 1259 aa8.27□□□□□ -1.08
GABPB2-201ENST00000368916 CLNS1AP54105 237 aaKnown RBP8.27□□□□□ -1.08
GABPB2-201ENST00000368916 RWDD2BP57060 319 aa8.27□□□□□ -1.08
GABPB2-201ENST00000368916 GOLGA8FQ08AF8 430 aa8.27□□□□□ -1.08
GABPB2-201ENST00000368916 GOLGA8DPQ0D2H9 430 aa8.27□□□□□ -1.08
GABPB2-201ENST00000368916 DPYDQ12882 1025 aa8.27□□□□□ -1.08
GABPB2-201ENST00000368916 COL9A3Q14050 684 aaPredicted RBP8.27□□□□□ -1.08
GABPB2-201ENST00000368916 KRT31Q15323 416 aa8.27□□□□□ -1.08
GABPB2-201ENST00000368916 ALX1Q15699 326 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms