RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 STX10O60499 249 aa15.51■□□□□ 0.07
EBF3-201ENST00000355311 N4BP1O75113 896 aaKnown RBP15.51■□□□□ 0.07
EBF3-201ENST00000355311 CCDC175P0C221 793 aa15.51■□□□□ 0.07
EBF3-201ENST00000355311 GTF2IP78347 998 aa15.51■□□□□ 0.07
EBF3-201ENST00000355311 C12orf60Q5U649 245 aa15.51■□□□□ 0.07
EBF3-201ENST00000355311 PAPPAQ13219 1627 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 MYH6P13533 1939 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 SMCO2A6NFE2 343 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 TADA3O75528 432 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 NAALADL2Q58DX5 795 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 MFSD14BQ5SR56 506 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 NT5DC1Q5TFE4 455 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 KANK3Q6NY19 840 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 PDXDC2PQ6P474 469 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 TXLNBQ8N3L3 684 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 CCDC155Q8N6L0 562 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 ZNF579Q8NAF0 562 aaKnown RBP15.5■□□□□ 0.07
EBF3-201ENST00000355311 SMARCC1Q92922 1105 aaPredicted RBP15.5■□□□□ 0.07
EBF3-201ENST00000355311 CEP95Q96GE4 821 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 EYA3Q99504 573 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 NARFQ9UHQ1 456 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 NOP2P46087 812 aaKnown RBP15.5■□□□□ 0.07
EBF3-201ENST00000355311 COPB1P53618 953 aaKnown RBP15.5■□□□□ 0.07
EBF3-201ENST00000355311 TCP10Q12799 353 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 E2F4Q16254 413 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 UBE2SQ16763 222 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 CC2D1AQ6P1N0 951 aaPredicted RBP15.5■□□□□ 0.07
EBF3-201ENST00000355311 CLEC4GQ6UXB4 293 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 SLC30A10Q6XR72 485 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 ANKRD13CQ8N6S4 541 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 CNBD1Q8NA66 436 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 LRRC4BQ9NT99 713 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 DOT1LQ8TEK3 1739 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 PLCH1Q4KWH8 1693 aa15.5■□□□□ 0.07
EBF3-201ENST00000355311 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.49■□□□□ 0.07
EBF3-201ENST00000355311 TTC26A0AVF1 554 aa15.49■□□□□ 0.07
EBF3-201ENST00000355311 PLCG1P19174 1290 aa15.49■□□□□ 0.07
EBF3-201ENST00000355311 STK4Q13043 487 aa15.49■□□□□ 0.07
EBF3-201ENST00000355311 PTPROQ16827 1216 aa15.49■□□□□ 0.07
EBF3-201ENST00000355311 KLHL34Q8N239 644 aa15.49■□□□□ 0.07
EBF3-201ENST00000355311 SMCR8Q8TEV9 937 aaPredicted RBP15.49■□□□□ 0.07
EBF3-201ENST00000355311 KCNQ5Q9NR82 932 aa15.49■□□□□ 0.07
EBF3-201ENST00000355311 RRP15Q9Y3B9 282 aaKnown RBP15.49■□□□□ 0.07
EBF3-201ENST00000355311 POTEMA6NI47 508 aa15.49■□□□□ 0.07
EBF3-201ENST00000355311 ASIC1P78348 528 aa15.49■□□□□ 0.07
EBF3-201ENST00000355311 TRAPPC3LQ5T215 181 aa15.49■□□□□ 0.07
EBF3-201ENST00000355311 TTBK2Q6IQ55 1244 aa15.49■□□□□ 0.07
EBF3-201ENST00000355311 SH3RF1Q7Z6J0 888 aa15.49■□□□□ 0.07
EBF3-201ENST00000355311 RGS22Q8NE09 1264 aa15.49■□□□□ 0.07
EBF3-201ENST00000355311 SPATA20Q8TB22 786 aa15.49■□□□□ 0.07
EBF3-201ENST00000355311 FERMT2Q96AC1 680 aa15.49■□□□□ 0.07
EBF3-201ENST00000355311 ATP8A2Q9NTI2 1148 aa15.49■□□□□ 0.07
EBF3-201ENST00000355311 VPS18Q9P253 973 aa15.49■□□□□ 0.07
EBF3-201ENST00000355311 KIF2AO00139 706 aaPredicted RBP15.48■□□□□ 0.07
EBF3-201ENST00000355311 MFAP3LO75121 409 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 PARP1P09874 1014 aaKnown RBP15.48■□□□□ 0.07
EBF3-201ENST00000355311 CDK8P49336 464 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 KRT26Q7Z3Y9 468 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 RPGRQ92834 1020 aaKnown RBP15.48■□□□□ 0.07
EBF3-201ENST00000355311 GSDMAQ96QA5 445 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 CHD4Q14839 1912 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 MACROD2A1Z1Q3 448 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 PLEKP08567 350 aaPredicted RBP15.48■□□□□ 0.07
EBF3-201ENST00000355311 KIF5BP33176 963 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 APBA1Q02410 837 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 PDE4DQ08499 809 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 TCP11X2Q5H9J9 407 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 TRMT1LQ7Z2T5 733 aaKnown RBP15.48■□□□□ 0.07
EBF3-201ENST00000355311 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 KIFC2Q96AC6 838 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 NUDT12Q9BQG2 462 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 ZHX3Q9H4I2 956 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 PCDHA4Q9UN74 947 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 WNK3Q9BYP7 1800 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 ECM29Q5VYK3 1845 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 MYH8P13535 1937 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 DDAH1O94760 285 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 CALM1P0DP23 149 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 CALM2P0DP24 149 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 CALM3P0DP25 149 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 RASA1P20936 1047 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 ERCC5P28715 1186 aaPredicted RBP15.48■□□□□ 0.07
EBF3-201ENST00000355311 GTF2A1P52655 376 aaPredicted RBP15.48■□□□□ 0.07
EBF3-201ENST00000355311 DNAAF5Q86Y56 855 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 IRF2BP1Q8IU81 584 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 TBCKQ8TEA7 893 aa15.48■□□□□ 0.07
EBF3-201ENST00000355311 ROBO1Q9Y6N7 1651 aa15.47■□□□□ 0.07
EBF3-201ENST00000355311 UBAP1LF5GYI3 381 aa15.47■□□□□ 0.07
EBF3-201ENST00000355311 RPS6KA4O75676 772 aa15.47■□□□□ 0.07
EBF3-201ENST00000355311 MATR3P43243 847 aaKnown RBP eCLIP15.47■□□□□ 0.07
EBF3-201ENST00000355311 KCTD1Q719H9 257 aa15.47■□□□□ 0.07
EBF3-201ENST00000355311 SRLQ86TD4 932 aa15.47■□□□□ 0.07
EBF3-201ENST00000355311 GPATCH11Q8N954 259 aa15.47■□□□□ 0.07
EBF3-201ENST00000355311 DISC1Q9NRI5 854 aa15.47■□□□□ 0.07
EBF3-201ENST00000355311 ARPP21Q9UBL0 812 aaPredicted RBP15.47■□□□□ 0.07
EBF3-201ENST00000355311 KIF5CO60282 957 aa15.47■□□□□ 0.07
EBF3-201ENST00000355311 TDP2O95551 362 aa15.47■□□□□ 0.07
EBF3-201ENST00000355311 TXLNAP40222 546 aa15.47■□□□□ 0.07
EBF3-201ENST00000355311 TNNI2P48788 182 aa15.47■□□□□ 0.07
EBF3-201ENST00000355311 GSPT2Q8IYD1 628 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms