RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 GPATCH4Q5T3I0 446 aaKnown RBP22.04■■□□□ 1.12
VPS72-201ENST00000354473 OLFML2BQ68BL8 750 aa22.04■■□□□ 1.12
VPS72-201ENST00000354473 CHST3Q7LGC8 479 aa22.04■■□□□ 1.12
VPS72-201ENST00000354473 FBXO40Q9UH90 709 aa22.04■■□□□ 1.12
VPS72-201ENST00000354473 ERICH2A1L162 156 aa22.03■■□□□ 1.12
VPS72-201ENST00000354473 CYP2C19P33261 490 aa22.03■■□□□ 1.12
VPS72-201ENST00000354473 SART3Q15020 963 aaKnown RBP22.03■■□□□ 1.12
VPS72-201ENST00000354473 MB21D2Q8IYB1 491 aaPredicted RBP22.03■■□□□ 1.12
VPS72-201ENST00000354473 CHST13Q8NET6 341 aa22.03■■□□□ 1.12
VPS72-201ENST00000354473 RANBP17Q9H2T7 1088 aaKnown RBP22.03■■□□□ 1.12
VPS72-201ENST00000354473 SGPL1O95470 568 aa22.02■■□□□ 1.12
VPS72-201ENST00000354473 CCND3P30281 292 aaPredicted RBP22.02■■□□□ 1.12
VPS72-201ENST00000354473 ANTXR2P58335 489 aa22.02■■□□□ 1.12
VPS72-201ENST00000354473 DDX11Q96FC9 970 aa22.02■■□□□ 1.12
VPS72-201ENST00000354473 MAML3Q96JK9 1138 aa22.02■■□□□ 1.12
VPS72-201ENST00000354473 RNF146Q9NTX7 359 aa22.02■■□□□ 1.12
VPS72-201ENST00000354473 CCPG1Q9ULG6 757 aa22.02■■□□□ 1.12
VPS72-201ENST00000354473 IGHA2P01877 340 aa22.01■■□□□ 1.11
VPS72-201ENST00000354473 ALAS1P13196 640 aa22.01■■□□□ 1.11
VPS72-201ENST00000354473 ZNF792Q3KQV3 632 aa22.01■■□□□ 1.11
VPS72-201ENST00000354473 ASPRV1Q53RT3 343 aa22.01■■□□□ 1.11
VPS72-201ENST00000354473 RNF20Q5VTR2 975 aa22.01■■□□□ 1.11
VPS72-201ENST00000354473 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.01■■□□□ 1.11
VPS72-201ENST00000354473 CPVLQ9H3G5 476 aa22.01■■□□□ 1.11
VPS72-201ENST00000354473 ACAD9Q9H845 621 aa22.01■■□□□ 1.11
VPS72-201ENST00000354473 SMCHD1A6NHR9 2005 aa22■■□□□ 1.11
VPS72-201ENST00000354473 TFRCP02786 760 aaKnown RBP22■■□□□ 1.11
VPS72-201ENST00000354473 ICAM1P05362 532 aa22■■□□□ 1.11
VPS72-201ENST00000354473 PARP1P09874 1014 aaKnown RBP22■■□□□ 1.11
VPS72-201ENST00000354473 TAL1P17542 331 aaPredicted RBP22■■□□□ 1.11
VPS72-201ENST00000354473 WTAPQ15007 396 aa22■■□□□ 1.11
VPS72-201ENST00000354473 TKFCQ3LXA3 575 aa22■■□□□ 1.11
VPS72-201ENST00000354473 TMEM67Q5HYA8 995 aa22■■□□□ 1.11
VPS72-201ENST00000354473 ANKRD35Q8N283 1001 aa22■■□□□ 1.11
VPS72-201ENST00000354473 TRERF1Q96PN7 1200 aa22■■□□□ 1.11
VPS72-201ENST00000354473 UBA5Q9GZZ9 404 aa22■■□□□ 1.11
VPS72-201ENST00000354473 SENP2Q9HC62 589 aa22■■□□□ 1.11
VPS72-201ENST00000354473 PRC1O43663 620 aa21.99■■□□□ 1.11
VPS72-201ENST00000354473 CRISPLD2Q9H0B8 497 aa21.99■■□□□ 1.11
VPS72-201ENST00000354473 DIS3Q9Y2L1 958 aaKnown RBP21.99■■□□□ 1.11
VPS72-201ENST00000354473 PDE4DIPQ5VU43 2346 aa21.98■■□□□ 1.11
VPS72-201ENST00000354473 DNAJC25-GNG10A0A024R161 153 aa21.98■■□□□ 1.11
VPS72-201ENST00000354473 CYBAP13498 195 aa21.98■■□□□ 1.11
VPS72-201ENST00000354473 TRPV1Q8NER1 839 aa21.98■■□□□ 1.11
VPS72-201ENST00000354473 IGDCC4Q8TDY8 1250 aa21.98■■□□□ 1.11
VPS72-201ENST00000354473 FRMPD3Q5JV73 1810 aa21.98■■□□□ 1.11
VPS72-201ENST00000354473 TNRC18O15417 2968 aaPredicted RBP21.97■■□□□ 1.11
VPS72-201ENST00000354473 MCM5P33992 734 aa21.97■■□□□ 1.11
VPS72-201ENST00000354473 COL9A3Q14050 684 aaPredicted RBP21.97■■□□□ 1.11
VPS72-201ENST00000354473 MUM1L1Q5H9M0 696 aa21.97■■□□□ 1.11
VPS72-201ENST00000354473 A1CFQ9NQ94 594 aaKnown RBP21.97■■□□□ 1.11
VPS72-201ENST00000354473 DHX16O60231 1041 aaKnown RBP21.96■■□□□ 1.11
VPS72-201ENST00000354473 FARP2O94887 1054 aaPredicted RBP21.96■■□□□ 1.11
VPS72-201ENST00000354473 CNGA1P29973 690 aa21.96■■□□□ 1.11
VPS72-201ENST00000354473 ADGRF4Q8IZF3 695 aa21.96■■□□□ 1.11
VPS72-201ENST00000354473 STAG2Q8N3U4 1231 aa21.96■■□□□ 1.11
VPS72-201ENST00000354473 TINF2Q9BSI4 451 aa21.96■■□□□ 1.11
VPS72-201ENST00000354473 LY9Q9HBG7 655 aa21.96■■□□□ 1.11
VPS72-201ENST00000354473 GPHNQ9NQX3 736 aaPredicted RBP21.96■■□□□ 1.11
VPS72-201ENST00000354473 MYH6P13533 1939 aa21.96■■□□□ 1.11
VPS72-201ENST00000354473 PFASO15067 1338 aa21.95■■□□□ 1.11
VPS72-201ENST00000354473 REC8O95072 547 aa21.95■■□□□ 1.1
VPS72-201ENST00000354473 CAPN2P17655 700 aa21.95■■□□□ 1.1
VPS72-201ENST00000354473 CDC37Q16543 378 aaPredicted RBP21.95■■□□□ 1.1
VPS72-201ENST00000354473 PRAMEF19Q5SWL8 479 aa21.95■■□□□ 1.1
VPS72-201ENST00000354473 CATIPQ7Z7H3 387 aa21.95■■□□□ 1.1
VPS72-201ENST00000354473 MAD2L2Q9UI95 211 aa21.95■■□□□ 1.1
VPS72-201ENST00000354473 PNMA2Q9UL42 364 aa21.95■■□□□ 1.1
VPS72-201ENST00000354473 WDR19Q8NEZ3 1342 aa21.95■■□□□ 1.1
VPS72-201ENST00000354473 MCM3APO60318 1980 aa21.94■■□□□ 1.1
VPS72-201ENST00000354473 KLRF2D3W0D1 207 aa21.94■■□□□ 1.1
VPS72-201ENST00000354473 SH2B2O14492 632 aaPredicted RBP21.94■■□□□ 1.1
VPS72-201ENST00000354473 CNTN2Q02246 1040 aa21.94■■□□□ 1.1
VPS72-201ENST00000354473 GRM4Q14833 912 aa21.94■■□□□ 1.1
VPS72-201ENST00000354473 NSMFQ6X4W1 530 aa21.94■■□□□ 1.1
VPS72-201ENST00000354473 UBE2Q1Q7Z7E8 422 aa21.94■■□□□ 1.1
VPS72-201ENST00000354473 RASEFQ8IZ41 740 aa21.94■■□□□ 1.1
VPS72-201ENST00000354473 TMEM87BQ96K49 555 aa21.94■■□□□ 1.1
VPS72-201ENST00000354473 MTA3Q9BTC8 594 aa21.94■■□□□ 1.1
VPS72-201ENST00000354473 DDX20Q9UHI6 824 aaKnown RBP21.94■■□□□ 1.1
VPS72-201ENST00000354473 MKI67P46013 3256 aaKnown RBP21.93■■□□□ 1.1
VPS72-201ENST00000354473 POTEB2H3BUK9 544 aa21.93■■□□□ 1.1
VPS72-201ENST00000354473 TROAPQ12815 778 aa21.93■■□□□ 1.1
VPS72-201ENST00000354473 USH1GQ495M9 461 aa21.93■■□□□ 1.1
VPS72-201ENST00000354473 LHX8Q68G74 356 aa21.93■■□□□ 1.1
VPS72-201ENST00000354473 ZNF467Q7Z7K2 595 aaPredicted RBP21.93■■□□□ 1.1
VPS72-201ENST00000354473 MSL3Q8N5Y2 521 aaKnown RBP21.93■■□□□ 1.1
VPS72-201ENST00000354473 FGD4Q96M96 766 aa21.93■■□□□ 1.1
VPS72-201ENST00000354473 NEK1Q96PY6 1258 aa21.93■■□□□ 1.1
VPS72-201ENST00000354473 JMJD4Q9H9V9 463 aa21.93■■□□□ 1.1
VPS72-201ENST00000354473 VAT1LQ9HCJ6 419 aa21.93■■□□□ 1.1
VPS72-201ENST00000354473 CYP39A1Q9NYL5 469 aa21.93■■□□□ 1.1
VPS72-201ENST00000354473 OGDHLQ9ULD0 1010 aa21.93■■□□□ 1.1
VPS72-201ENST00000354473 SYNGAP1Q96PV0 1343 aa21.93■■□□□ 1.1
VPS72-201ENST00000354473 LCTP09848 1927 aa21.92■■□□□ 1.1
VPS72-201ENST00000354473 PALM3A6NDB9 673 aaPredicted RBP21.92■■□□□ 1.1
VPS72-201ENST00000354473 NFIBO00712 420 aa21.92■■□□□ 1.1
VPS72-201ENST00000354473 MSCO60682 206 aa21.92■■□□□ 1.1
VPS72-201ENST00000354473 ADCK5Q3MIX3 580 aa21.92■■□□□ 1.1
VPS72-201ENST00000354473 TSGA10IPQ3SY00 556 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms