RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 SNAP25P60880 206 aa17.16■□□□□ 0.34
TUBA3D-201ENST00000321253 STOX1Q6ZVD7 989 aa17.16■□□□□ 0.34
TUBA3D-201ENST00000321253 ANKRD35Q8N283 1001 aa17.16■□□□□ 0.34
TUBA3D-201ENST00000321253 AGBL1Q96MI9 1066 aa17.16■□□□□ 0.34
TUBA3D-201ENST00000321253 TKFCQ3LXA3 575 aa17.16■□□□□ 0.34
TUBA3D-201ENST00000321253 RNF20Q5VTR2 975 aa17.16■□□□□ 0.34
TUBA3D-201ENST00000321253 MAML3Q96JK9 1138 aa17.16■□□□□ 0.34
TUBA3D-201ENST00000321253 RANBP17Q9H2T7 1088 aaKnown RBP17.16■□□□□ 0.34
TUBA3D-201ENST00000321253 ACAD9Q9H845 621 aa17.16■□□□□ 0.34
TUBA3D-201ENST00000321253 RNF146Q9NTX7 359 aa17.16■□□□□ 0.34
TUBA3D-201ENST00000321253 CCPG1Q9ULG6 757 aa17.16■□□□□ 0.34
TUBA3D-201ENST00000321253 DIS3Q9Y2L1 958 aaKnown RBP17.16■□□□□ 0.34
TUBA3D-201ENST00000321253 ZNFX1Q9P2E3 1918 aaKnown RBP17.16■□□□□ 0.34
TUBA3D-201ENST00000321253 ZNF536O15090 1300 aa17.15■□□□□ 0.34
TUBA3D-201ENST00000321253 SLC27A2O14975 620 aa17.15■□□□□ 0.34
TUBA3D-201ENST00000321253 GOLGA8HP0CJ92 632 aa17.15■□□□□ 0.34
TUBA3D-201ENST00000321253 ALAS1P13196 640 aa17.15■□□□□ 0.34
TUBA3D-201ENST00000321253 CCND3P30281 292 aaPredicted RBP17.15■□□□□ 0.34
TUBA3D-201ENST00000321253 SEC23AQ15436 765 aa17.15■□□□□ 0.34
TUBA3D-201ENST00000321253 ASPRV1Q53RT3 343 aa17.15■□□□□ 0.34
TUBA3D-201ENST00000321253 CREB3L3Q68CJ9 461 aa17.15■□□□□ 0.34
TUBA3D-201ENST00000321253 TRERF1Q96PN7 1200 aa17.15■□□□□ 0.34
TUBA3D-201ENST00000321253 ICAM1P05362 532 aa17.14■□□□□ 0.33
TUBA3D-201ENST00000321253 PARP1P09874 1014 aaKnown RBP17.14■□□□□ 0.33
TUBA3D-201ENST00000321253 CNGA1P29973 690 aa17.14■□□□□ 0.33
TUBA3D-201ENST00000321253 WTAPQ15007 396 aa17.14■□□□□ 0.33
TUBA3D-201ENST00000321253 NECTIN1Q15223 517 aa17.14■□□□□ 0.33
TUBA3D-201ENST00000321253 ZNF792Q3KQV3 632 aa17.14■□□□□ 0.33
TUBA3D-201ENST00000321253 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.14■□□□□ 0.33
TUBA3D-201ENST00000321253 CHST3Q7LGC8 479 aa17.14■□□□□ 0.33
TUBA3D-201ENST00000321253 CRISPLD2Q9H0B8 497 aa17.14■□□□□ 0.33
TUBA3D-201ENST00000321253 PNMA2Q9UL42 364 aa17.14■□□□□ 0.33
TUBA3D-201ENST00000321253 FARP2O94887 1054 aaPredicted RBP17.13■□□□□ 0.33
TUBA3D-201ENST00000321253 TMEM67Q5HYA8 995 aa17.13■□□□□ 0.33
TUBA3D-201ENST00000321253 MB21D2Q8IYB1 491 aaPredicted RBP17.13■□□□□ 0.33
TUBA3D-201ENST00000321253 PDE4DIPQ5VU43 2346 aa17.12■□□□□ 0.33
TUBA3D-201ENST00000321253 PLXNA1Q9UIW2 1896 aa17.12■□□□□ 0.33
TUBA3D-201ENST00000321253 DNAJC25-GNG10A0A024R161 153 aa17.12■□□□□ 0.33
TUBA3D-201ENST00000321253 DHX16O60231 1041 aaKnown RBP17.12■□□□□ 0.33
TUBA3D-201ENST00000321253 MSCO60682 206 aa17.12■□□□□ 0.33
TUBA3D-201ENST00000321253 IGHA2P01877 340 aa17.12■□□□□ 0.33
TUBA3D-201ENST00000321253 TINF2Q9BSI4 451 aa17.12■□□□□ 0.33
TUBA3D-201ENST00000321253 UBA5Q9GZZ9 404 aa17.12■□□□□ 0.33
TUBA3D-201ENST00000321253 PFASO15067 1338 aa17.12■□□□□ 0.33
TUBA3D-201ENST00000321253 PRC1O43663 620 aa17.11■□□□□ 0.33
TUBA3D-201ENST00000321253 CYBAP13498 195 aa17.11■□□□□ 0.33
TUBA3D-201ENST00000321253 MCM5P33992 734 aa17.11■□□□□ 0.33
TUBA3D-201ENST00000321253 ANTXR2P58335 489 aa17.11■□□□□ 0.33
TUBA3D-201ENST00000321253 ANKLE1Q8NAG6 615 aa17.11■□□□□ 0.33
TUBA3D-201ENST00000321253 A1CFQ9NQ94 594 aaKnown RBP17.11■□□□□ 0.33
TUBA3D-201ENST00000321253 POTEB2H3BUK9 544 aa17.11■□□□□ 0.33
TUBA3D-201ENST00000321253 CATIPQ7Z7H3 387 aa17.11■□□□□ 0.33
TUBA3D-201ENST00000321253 MSL3Q8N5Y2 521 aaKnown RBP17.11■□□□□ 0.33
TUBA3D-201ENST00000321253 TRPV1Q8NER1 839 aa17.11■□□□□ 0.33
TUBA3D-201ENST00000321253 MTA3Q9BTC8 594 aa17.11■□□□□ 0.33
TUBA3D-201ENST00000321253 CPVLQ9H3G5 476 aa17.11■□□□□ 0.33
TUBA3D-201ENST00000321253 DDX20Q9UHI6 824 aaKnown RBP17.11■□□□□ 0.33
TUBA3D-201ENST00000321253 NRBP1Q9UHY1 535 aa17.11■□□□□ 0.33
TUBA3D-201ENST00000321253 OGDHLQ9ULD0 1010 aa17.11■□□□□ 0.33
TUBA3D-201ENST00000321253 CNPY2Q9Y2B0 182 aa17.11■□□□□ 0.33
TUBA3D-201ENST00000321253 WDR19Q8NEZ3 1342 aa17.1■□□□□ 0.33
TUBA3D-201ENST00000321253 TNRC18O15417 2968 aaPredicted RBP17.1■□□□□ 0.33
TUBA3D-201ENST00000321253 MKI67P46013 3256 aaKnown RBP17.1■□□□□ 0.33
TUBA3D-201ENST00000321253 REC8O95072 547 aa17.1■□□□□ 0.33
TUBA3D-201ENST00000321253 CDC37Q16543 378 aaPredicted RBP17.1■□□□□ 0.33
TUBA3D-201ENST00000321253 MUM1L1Q5H9M0 696 aa17.1■□□□□ 0.33
TUBA3D-201ENST00000321253 PRAMEF19Q5SWL8 479 aa17.1■□□□□ 0.33
TUBA3D-201ENST00000321253 NSMFQ6X4W1 530 aa17.1■□□□□ 0.33
TUBA3D-201ENST00000321253 ZNF467Q7Z7K2 595 aaPredicted RBP17.1■□□□□ 0.33
TUBA3D-201ENST00000321253 ADGRF4Q8IZF3 695 aa17.1■□□□□ 0.33
TUBA3D-201ENST00000321253 IGDCC4Q8TDY8 1250 aa17.1■□□□□ 0.33
TUBA3D-201ENST00000321253 TMEM87BQ96K49 555 aa17.1■□□□□ 0.33
TUBA3D-201ENST00000321253 KLRF2D3W0D1 207 aa17.09■□□□□ 0.33
TUBA3D-201ENST00000321253 TAL1P17542 331 aaPredicted RBP17.09■□□□□ 0.33
TUBA3D-201ENST00000321253 LHX8Q68G74 356 aa17.09■□□□□ 0.33
TUBA3D-201ENST00000321253 UBE2Q1Q7Z7E8 422 aa17.09■□□□□ 0.33
TUBA3D-201ENST00000321253 HTATIP2Q9BUP3 242 aa17.09■□□□□ 0.33
TUBA3D-201ENST00000321253 SENP2Q9HC62 589 aa17.09■□□□□ 0.33
TUBA3D-201ENST00000321253 SYNGAP1Q96PV0 1343 aa17.09■□□□□ 0.33
TUBA3D-201ENST00000321253 SEPT4O43236 478 aa17.08■□□□□ 0.32
TUBA3D-201ENST00000321253 KRT32Q14532 448 aa17.08■□□□□ 0.32
TUBA3D-201ENST00000321253 GRM4Q14833 912 aa17.08■□□□□ 0.32
TUBA3D-201ENST00000321253 USH1GQ495M9 461 aa17.08■□□□□ 0.32
TUBA3D-201ENST00000321253 NFXL1Q6ZNB6 911 aa17.08■□□□□ 0.32
TUBA3D-201ENST00000321253 NECAB2Q7Z6G3 386 aa17.08■□□□□ 0.32
TUBA3D-201ENST00000321253 TMTC2Q8N394 836 aa17.08■□□□□ 0.32
TUBA3D-201ENST00000321253 STAG2Q8N3U4 1231 aa17.08■□□□□ 0.32
TUBA3D-201ENST00000321253 LY9Q9HBG7 655 aa17.08■□□□□ 0.32
TUBA3D-201ENST00000321253 VAT1LQ9HCJ6 419 aa17.08■□□□□ 0.32
TUBA3D-201ENST00000321253 CYP39A1Q9NYL5 469 aa17.08■□□□□ 0.32
TUBA3D-201ENST00000321253 MAD2L2Q9UI95 211 aa17.08■□□□□ 0.32
TUBA3D-201ENST00000321253 PALM3A6NDB9 673 aaPredicted RBP17.07■□□□□ 0.32
TUBA3D-201ENST00000321253 CNTN2Q02246 1040 aa17.07■□□□□ 0.32
TUBA3D-201ENST00000321253 MAMDC4Q6UXC1 1216 aa17.07■□□□□ 0.32
TUBA3D-201ENST00000321253 FAM133AQ8N9E0 248 aa17.07■□□□□ 0.32
TUBA3D-201ENST00000321253 NUP133Q8WUM0 1156 aa17.07■□□□□ 0.32
TUBA3D-201ENST00000321253 PAWRQ96IZ0 340 aaKnown RBP17.07■□□□□ 0.32
TUBA3D-201ENST00000321253 NEK1Q96PY6 1258 aa17.07■□□□□ 0.32
TUBA3D-201ENST00000321253 JMJD4Q9H9V9 463 aa17.07■□□□□ 0.32
TUBA3D-201ENST00000321253 PTPDC1A2A3K4 754 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms