RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 SLC34A2O95436 690 aa20.04■□□□□ 0.8
HMGCLL1-202ENST00000308161 SYN1P17600 705 aa20.04■□□□□ 0.8
HMGCLL1-202ENST00000308161 ATN1P54259 1190 aaPredicted RBP20.04■□□□□ 0.8
HMGCLL1-202ENST00000308161 ACAD9Q9H845 621 aa20.04■□□□□ 0.8
HMGCLL1-202ENST00000308161 ZNF536O15090 1300 aa20.04■□□□□ 0.8
HMGCLL1-202ENST00000308161 KBTBD13C9JR72 458 aa20.03■□□□□ 0.8
HMGCLL1-202ENST00000308161 DNM1LO00429 736 aa20.03■□□□□ 0.8
HMGCLL1-202ENST00000308161 PLA2G6O60733 806 aa20.03■□□□□ 0.8
HMGCLL1-202ENST00000308161 LRRC26Q2I0M4 334 aa20.03■□□□□ 0.8
HMGCLL1-202ENST00000308161 SYDE2Q5VT97 1194 aa20.03■□□□□ 0.8
HMGCLL1-202ENST00000308161 ARRDC4Q8NCT1 418 aa20.03■□□□□ 0.8
HMGCLL1-202ENST00000308161 TRERF1Q96PN7 1200 aa20.03■□□□□ 0.8
HMGCLL1-202ENST00000308161 ZHX1Q9UKY1 873 aaPredicted RBP20.03■□□□□ 0.8
HMGCLL1-202ENST00000308161 CCPG1Q9ULG6 757 aa20.03■□□□□ 0.8
HMGCLL1-202ENST00000308161 LAMA4Q16363 1823 aa20.03■□□□□ 0.8
HMGCLL1-202ENST00000308161 DNAJC25-GNG10A0A024R161 153 aa20.02■□□□□ 0.8
HMGCLL1-202ENST00000308161 RARBP10826 455 aa20.02■□□□□ 0.8
HMGCLL1-202ENST00000308161 PDHBP11177 359 aa20.02■□□□□ 0.8
HMGCLL1-202ENST00000308161 IQCA1Q86XH1 822 aa20.02■□□□□ 0.8
HMGCLL1-202ENST00000308161 RUFY2Q8WXA3 655 aa20.02■□□□□ 0.8
HMGCLL1-202ENST00000308161 LENG1Q96BZ8 264 aaPredicted RBP20.02■□□□□ 0.8
HMGCLL1-202ENST00000308161 TTC14Q96N46 770 aa20.02■□□□□ 0.8
HMGCLL1-202ENST00000308161 PCDH10Q9P2E7 1040 aa20.02■□□□□ 0.8
HMGCLL1-202ENST00000308161 RBM27Q9P2N5 1060 aaKnown RBP20.02■□□□□ 0.8
HMGCLL1-202ENST00000308161 TRIOBPQ9H2D6 2365 aa20.02■□□□□ 0.8
HMGCLL1-202ENST00000308161 POTEB2H3BUK9 544 aa20.02■□□□□ 0.79
HMGCLL1-202ENST00000308161 CHMLP26374 656 aa20.02■□□□□ 0.79
HMGCLL1-202ENST00000308161 CNTN2Q02246 1040 aa20.02■□□□□ 0.79
HMGCLL1-202ENST00000308161 A1CFQ9NQ94 594 aaKnown RBP20.02■□□□□ 0.79
HMGCLL1-202ENST00000308161 XPNPEP3Q9NQH7 507 aa20.02■□□□□ 0.79
HMGCLL1-202ENST00000308161 NRBP1Q9UHY1 535 aa20.02■□□□□ 0.79
HMGCLL1-202ENST00000308161 DNAH12Q6ZR08 3092 aa20.01■□□□□ 0.79
HMGCLL1-202ENST00000308161 RAD50Q92878 1312 aa20.01■□□□□ 0.79
HMGCLL1-202ENST00000308161 RANBP2P49792 3224 aaKnown RBP20.01■□□□□ 0.79
HMGCLL1-202ENST00000308161 ZNF865P0CJ78 1059 aaPredicted RBP20.01■□□□□ 0.79
HMGCLL1-202ENST00000308161 GOLGA8HP0CJ92 632 aa20.01■□□□□ 0.79
HMGCLL1-202ENST00000308161 AKR1A1P14550 325 aa20.01■□□□□ 0.79
HMGCLL1-202ENST00000308161 TKFCQ3LXA3 575 aa20.01■□□□□ 0.79
HMGCLL1-202ENST00000308161 MUM1L1Q5H9M0 696 aa20.01■□□□□ 0.79
HMGCLL1-202ENST00000308161 NSMFQ6X4W1 530 aa20.01■□□□□ 0.79
HMGCLL1-202ENST00000308161 FERMT2Q96AC1 680 aa20.01■□□□□ 0.79
HMGCLL1-202ENST00000308161 KAT14Q9H8E8 782 aa20.01■□□□□ 0.79
HMGCLL1-202ENST00000308161 SYNGAP1Q96PV0 1343 aa20■□□□□ 0.79
HMGCLL1-202ENST00000308161 SNAI1O95863 264 aaPredicted RBP20■□□□□ 0.79
HMGCLL1-202ENST00000308161 PGK1P00558 417 aa20■□□□□ 0.79
HMGCLL1-202ENST00000308161 ZNF543Q08ER8 600 aa20■□□□□ 0.79
HMGCLL1-202ENST00000308161 LRRC41Q15345 812 aa20■□□□□ 0.79
HMGCLL1-202ENST00000308161 MSL3Q8N5Y2 521 aaKnown RBP20■□□□□ 0.79
HMGCLL1-202ENST00000308161 FGD4Q96M96 766 aa20■□□□□ 0.79
HMGCLL1-202ENST00000308161 ZSCAN10Q96SZ4 725 aaPredicted RBP20■□□□□ 0.79
HMGCLL1-202ENST00000308161 KRT23Q9C075 422 aa20■□□□□ 0.79
HMGCLL1-202ENST00000308161 RANBP17Q9H2T7 1088 aaKnown RBP20■□□□□ 0.79
HMGCLL1-202ENST00000308161 CDKN2AIPQ9NXV6 580 aaPredicted RBP20■□□□□ 0.79
HMGCLL1-202ENST00000308161 ZSWIM5Q9P217 1185 aa20■□□□□ 0.79
HMGCLL1-202ENST00000308161 ICAM1P05362 532 aa19.99■□□□□ 0.79
HMGCLL1-202ENST00000308161 ADCYAP1R1P41586 468 aa19.99■□□□□ 0.79
HMGCLL1-202ENST00000308161 PTH1RQ03431 593 aa19.99■□□□□ 0.79
HMGCLL1-202ENST00000308161 CCDC178Q5BJE1 867 aa19.99■□□□□ 0.79
HMGCLL1-202ENST00000308161 MAMDC4Q6UXC1 1216 aa19.99■□□□□ 0.79
HMGCLL1-202ENST00000308161 BTNL9Q6UXG8 535 aa19.99■□□□□ 0.79
HMGCLL1-202ENST00000308161 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.99■□□□□ 0.79
HMGCLL1-202ENST00000308161 ARMCX2Q7L311 632 aa19.99■□□□□ 0.79
HMGCLL1-202ENST00000308161 ZNF467Q7Z7K2 595 aaPredicted RBP19.99■□□□□ 0.79
HMGCLL1-202ENST00000308161 DGKHQ86XP1 1220 aa19.99■□□□□ 0.79
HMGCLL1-202ENST00000308161 PNMA1Q8ND90 353 aa19.99■□□□□ 0.79
HMGCLL1-202ENST00000308161 UBAC1Q9BSL1 405 aa19.99■□□□□ 0.79
HMGCLL1-202ENST00000308161 CPVLQ9H3G5 476 aa19.99■□□□□ 0.79
HMGCLL1-202ENST00000308161 CNNM2Q9H8M5 875 aa19.99■□□□□ 0.79
HMGCLL1-202ENST00000308161 TNKSO95271 1327 aa19.98■□□□□ 0.79
HMGCLL1-202ENST00000308161 SMCHD1A6NHR9 2005 aa19.98■□□□□ 0.79
HMGCLL1-202ENST00000308161 ACVR2BQ13705 512 aa19.98■□□□□ 0.79
HMGCLL1-202ENST00000308161 RNF180Q86T96 592 aa19.98■□□□□ 0.79
HMGCLL1-202ENST00000308161 CCDC144CPQ8IYA2 1237 aa19.98■□□□□ 0.79
HMGCLL1-202ENST00000308161 ENAHQ8N8S7 591 aaPredicted RBP19.98■□□□□ 0.79
HMGCLL1-202ENST00000308161 FAM133AQ8N9E0 248 aa19.98■□□□□ 0.79
HMGCLL1-202ENST00000308161 FAM184BQ9ULE4 1060 aa19.98■□□□□ 0.79
HMGCLL1-202ENST00000308161 ATP11BQ9Y2G3 1177 aa19.98■□□□□ 0.79
HMGCLL1-202ENST00000308161 FXR1P51114 621 aaKnown RBP eCLIP19.97■□□□□ 0.79
HMGCLL1-202ENST00000308161 RTP1P59025 263 aa19.97■□□□□ 0.79
HMGCLL1-202ENST00000308161 SKAP1Q86WV1 359 aa19.97■□□□□ 0.79
HMGCLL1-202ENST00000308161 UBA5Q9GZZ9 404 aa19.97■□□□□ 0.79
HMGCLL1-202ENST00000308161 DDX49Q9Y6V7 483 aaKnown RBP19.97■□□□□ 0.79
HMGCLL1-202ENST00000308161 SOWAHBA6NEL2 793 aa19.96■□□□□ 0.79
HMGCLL1-202ENST00000308161 SNHG28P0DPA3 235 aa19.96■□□□□ 0.79
HMGCLL1-202ENST00000308161 NT5C2P49902 561 aa19.96■□□□□ 0.79
HMGCLL1-202ENST00000308161 TRDNQ13061 729 aa19.96■□□□□ 0.79
HMGCLL1-202ENST00000308161 GPATCH4Q5T3I0 446 aaKnown RBP19.96■□□□□ 0.79
HMGCLL1-202ENST00000308161 PURBQ96QR8 312 aaKnown RBP19.96■□□□□ 0.79
HMGCLL1-202ENST00000308161 ABHD16BQ9H3Z7 469 aa19.96■□□□□ 0.79
HMGCLL1-202ENST00000308161 CYP39A1Q9NYL5 469 aa19.96■□□□□ 0.79
HMGCLL1-202ENST00000308161 MCM3APO60318 1980 aa19.95■□□□□ 0.78
HMGCLL1-202ENST00000308161 PTPDC1A2A3K4 754 aa19.95■□□□□ 0.78
HMGCLL1-202ENST00000308161 NFIBO00712 420 aa19.95■□□□□ 0.78
HMGCLL1-202ENST00000308161 SGSM2O43147 1006 aa19.95■□□□□ 0.78
HMGCLL1-202ENST00000308161 DHX16O60231 1041 aaKnown RBP19.95■□□□□ 0.78
HMGCLL1-202ENST00000308161 MAGEA10P43363 369 aaPredicted RBP19.95■□□□□ 0.78
HMGCLL1-202ENST00000308161 CCDC144BQ3MJ40 725 aa19.95■□□□□ 0.78
HMGCLL1-202ENST00000308161 USH1GQ495M9 461 aa19.95■□□□□ 0.78
HMGCLL1-202ENST00000308161 IFIT1BQ5T764 474 aaKnown RBP19.95■□□□□ 0.78
HMGCLL1-202ENST00000308161 NOL8Q76FK4 1167 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms