RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 KRT18P05783 430 aaKnown RBP14.47□□□□□ -0.09
TRIM35-201ENST00000305364 SARSP49591 514 aaKnown RBP14.47□□□□□ -0.09
TRIM35-201ENST00000305364 SNCBQ16143 134 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 SOGA3Q5TF21 947 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 NFRKBQ6P4R8 1299 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 SGMS1Q86VZ5 419 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 SUGP1Q8IWZ8 645 aaKnown RBP14.47□□□□□ -0.09
TRIM35-201ENST00000305364 KRT12Q99456 494 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 SMARCAL1Q9NZC9 954 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 SUFUQ9UMX1 484 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 PLEKHG1Q9ULL1 1385 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 IRS4O14654 1257 aaPredicted RBP14.47□□□□□ -0.09
TRIM35-201ENST00000305364 ZBED6P86452 979 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 RASSF7Q02833 373 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 SPATA5Q8NB90 893 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 SPATA4Q8NEY3 305 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 RSRC1Q96IZ7 334 aaKnown RBP14.47□□□□□ -0.09
TRIM35-201ENST00000305364 CNOT6LQ96LI5 555 aaKnown RBP14.47□□□□□ -0.09
TRIM35-201ENST00000305364 SELENOSQ9BQE4 189 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 RNF26Q9BY78 433 aaPredicted RBP14.47□□□□□ -0.09
TRIM35-201ENST00000305364 TMOD3Q9NYL9 352 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 KIF5BP33176 963 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 DPYDQ12882 1025 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 PTPROQ16827 1216 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 CCDC170Q8IYT3 715 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 SDR42E1Q8WUS8 393 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 STRBPQ96SI9 672 aaKnown RBP14.47□□□□□ -0.09
TRIM35-201ENST00000305364 DUSP10Q9Y6W6 482 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 CACNA1FO60840 1977 aa14.47□□□□□ -0.09
TRIM35-201ENST00000305364 CALML3P27482 149 aa14.46□□□□□ -0.09
TRIM35-201ENST00000305364 IGHMBP2P38935 993 aaKnown RBP14.46□□□□□ -0.09
TRIM35-201ENST00000305364 MAP2K1Q02750 393 aaPredicted RBP14.46□□□□□ -0.09
TRIM35-201ENST00000305364 AGPAT5Q9NUQ2 364 aa14.46□□□□□ -0.09
TRIM35-201ENST00000305364 CALM1P0DP23 149 aa14.46□□□□□ -0.09
TRIM35-201ENST00000305364 CALM2P0DP24 149 aa14.46□□□□□ -0.09
TRIM35-201ENST00000305364 CALM3P0DP25 149 aa14.46□□□□□ -0.09
TRIM35-201ENST00000305364 CTNNA1P35221 906 aaKnown RBP14.46□□□□□ -0.09
TRIM35-201ENST00000305364 AARSP49588 968 aaKnown RBP eCLIP14.46□□□□□ -0.09
TRIM35-201ENST00000305364 PPP2R5AQ15172 486 aa14.46□□□□□ -0.09
TRIM35-201ENST00000305364 HEATR3Q7Z4Q2 680 aa14.46□□□□□ -0.09
TRIM35-201ENST00000305364 ELOA2Q8IYF1 753 aaPredicted RBP14.46□□□□□ -0.09
TRIM35-201ENST00000305364 ANKS4BQ8N8V4 417 aa14.46□□□□□ -0.09
TRIM35-201ENST00000305364 ARL8AQ96BM9 186 aa14.46□□□□□ -0.09
TRIM35-201ENST00000305364 RBM28Q9NW13 759 aaKnown RBP14.46□□□□□ -0.09
TRIM35-201ENST00000305364 DMGDHQ9UI17 866 aaKnown RBP14.46□□□□□ -0.09
TRIM35-201ENST00000305364 XRN1Q8IZH2 1706 aaKnown RBP14.46□□□□□ -0.09
TRIM35-201ENST00000305364 EZH2Q15910 746 aaKnown RBP14.46□□□□□ -0.09
TRIM35-201ENST00000305364 CDKAL1Q5VV42 579 aa14.46□□□□□ -0.09
TRIM35-201ENST00000305364 CACNA2D3Q8IZS8 1091 aa14.46□□□□□ -0.09
TRIM35-201ENST00000305364 FBXL16Q8N461 479 aa14.46□□□□□ -0.09
TRIM35-201ENST00000305364 MSL3Q8N5Y2 521 aaKnown RBP14.46□□□□□ -0.09
TRIM35-201ENST00000305364 TBC1D31Q96DN5 1066 aa14.46□□□□□ -0.09
TRIM35-201ENST00000305364 AXIN2Q9Y2T1 843 aa14.46□□□□□ -0.09
TRIM35-201ENST00000305364 NCK2O43639 380 aa14.46□□□□□ -0.1
TRIM35-201ENST00000305364 MAGEB6P1A0A0J9YX57 407 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 BUB1BO60566 1050 aaPredicted RBP14.45□□□□□ -0.1
TRIM35-201ENST00000305364 CCDC50Q8IVM0 306 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 LACRTQ9GZZ8 138 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 CD248Q9HCU0 757 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 SEC31BQ9NQW1 1179 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 PCDHA13Q9Y5I0 950 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 TECPR2O15040 1411 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 EIF4A3P38919 411 aaKnown RBP14.45□□□□□ -0.1
TRIM35-201ENST00000305364 SEC24CP53992 1094 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 TCIRG1Q13488 830 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 NTRK3Q16288 839 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 RUFY4Q6ZNE9 571 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 TRIM31Q9BZY9 425 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 NBPF3Q9H094 633 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 BMP2KQ9NSY1 1161 aaPredicted RBP14.45□□□□□ -0.1
TRIM35-201ENST00000305364 FAM237AA0A1B0GTK4 181 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 CEP104O60308 925 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 ECM2O94769 699 aaPredicted RBP14.45□□□□□ -0.1
TRIM35-201ENST00000305364 MYBL2P10244 700 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 PPP1R7Q15435 360 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 KRT71Q3SY84 523 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 NT5DC1Q5TFE4 455 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 LRRC45Q96CN5 670 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 OSBPL9Q96SU4 736 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 GREM2Q9H772 168 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 KLC4Q9NSK0 619 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 RIPOR2Q9Y4F9 1068 aa14.45□□□□□ -0.1
TRIM35-201ENST00000305364 RAD21O60216 631 aa14.44□□□□□ -0.1
TRIM35-201ENST00000305364 CLSTN1O94985 981 aa14.44□□□□□ -0.1
TRIM35-201ENST00000305364 APBA1Q02410 837 aa14.44□□□□□ -0.1
TRIM35-201ENST00000305364 RAPGEF1Q13905 1077 aa14.44□□□□□ -0.1
TRIM35-201ENST00000305364 PPP2R5BQ15173 497 aa14.44□□□□□ -0.1
TRIM35-201ENST00000305364 SEPT11Q9NVA2 429 aaKnown RBP14.44□□□□□ -0.1
TRIM35-201ENST00000305364 SNX12Q9UMY4 172 aa14.44□□□□□ -0.1
TRIM35-201ENST00000305364 KIF11P52732 1056 aa14.44□□□□□ -0.1
TRIM35-201ENST00000305364 EHHADHQ08426 723 aa14.44□□□□□ -0.1
TRIM35-201ENST00000305364 SPAG5Q96R06 1193 aa14.44□□□□□ -0.1
TRIM35-201ENST00000305364 CAPN11Q9UMQ6 739 aa14.44□□□□□ -0.1
TRIM35-201ENST00000305364 PUM3Q15397 648 aaKnown RBP14.44□□□□□ -0.1
TRIM35-201ENST00000305364 RETREG2Q8NC44 543 aa14.44□□□□□ -0.1
TRIM35-201ENST00000305364 EHD2Q9NZN4 543 aa14.44□□□□□ -0.1
TRIM35-201ENST00000305364 SLC9C1Q4G0N8 1177 aa14.43□□□□□ -0.1
TRIM35-201ENST00000305364 VAT1LQ9HCJ6 419 aa14.43□□□□□ -0.1
TRIM35-201ENST00000305364 PEAK1Q9H792 1746 aa14.43□□□□□ -0.1
TRIM35-201ENST00000305364 FAM208AQ9UK61 1670 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms