RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 GLT8D2Q9H1C3 349 aa22.03■■□□□ 1.12
HOXC4-201ENST00000303406 TMOD2Q9NZR1 351 aa22.03■■□□□ 1.12
HOXC4-201ENST00000303406 GTPBP6O43824 516 aaPredicted RBP22.02■■□□□ 1.12
HOXC4-201ENST00000303406 DPEP1P16444 411 aa22.02■■□□□ 1.12
HOXC4-201ENST00000303406 CACNB3P54284 484 aa22.02■■□□□ 1.12
HOXC4-201ENST00000303406 CLEC10AQ8IUN9 316 aa22.02■■□□□ 1.12
HOXC4-201ENST00000303406 ZSCAN29Q8IWY8 852 aaPredicted RBP22.02■■□□□ 1.12
HOXC4-201ENST00000303406 ADGRF4Q8IZF3 695 aa22.02■■□□□ 1.12
HOXC4-201ENST00000303406 TDRD3Q9H7E2 651 aaKnown RBP22.02■■□□□ 1.12
HOXC4-201ENST00000303406 GPCPD1Q9NPB8 672 aa22.02■■□□□ 1.12
HOXC4-201ENST00000303406 HERC5Q9UII4 1024 aaKnown RBP22.02■■□□□ 1.12
HOXC4-201ENST00000303406 ARFGEF1Q9Y6D6 1849 aa22.02■■□□□ 1.12
HOXC4-201ENST00000303406 MYL1P05976 194 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 OR52Z1P0C646 297 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 TGFB2P61812 414 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 FANCCQ00597 558 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 FKBP1CQ5VVH2 108 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 DEFB132Q7Z7B7 95 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 GRAMD1CQ8IYS0 662 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 GMCL1P1Q8NEA9 526 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 PRMT6Q96LA8 375 aaPredicted RBP22.01■■□□□ 1.11
HOXC4-201ENST00000303406 PDGFDQ9GZP0 370 aaPredicted RBP22.01■■□□□ 1.11
HOXC4-201ENST00000303406 TMEM60Q9H2L4 133 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 MAGEF1Q9HAY2 307 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 RIC8AQ9NPQ8 531 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 NRBP1Q9UHY1 535 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 SPDYE2BA6NHP3 402 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 ZBTB5O15062 677 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 SPDYE6P0CI01 402 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 EEF2P13639 858 aaKnown RBP22.01■■□□□ 1.11
HOXC4-201ENST00000303406 CCDC96Q2M329 555 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 CCDC144BQ3MJ40 725 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 LARGE2Q8N3Y3 721 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 MTMR14Q8NCE2 650 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 XPO4Q9C0E2 1151 aaKnown RBP22.01■■□□□ 1.11
HOXC4-201ENST00000303406 CUEDC2Q9H467 287 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 IFNKQ9P0W0 207 aa22.01■■□□□ 1.11
HOXC4-201ENST00000303406 ABCB5Q2M3G0 1257 aa22■■□□□ 1.11
HOXC4-201ENST00000303406 AGBL3Q8NEM8 1001 aa22■■□□□ 1.11
HOXC4-201ENST00000303406 FBXO41Q8TF61 875 aa22■■□□□ 1.11
HOXC4-201ENST00000303406 DISC1Q9NRI5 854 aa22■■□□□ 1.11
HOXC4-201ENST00000303406 PYCARDQ9ULZ3 195 aa22■■□□□ 1.11
HOXC4-201ENST00000303406 LMOD1P29536 600 aaPredicted RBP21.99■■□□□ 1.11
HOXC4-201ENST00000303406 AFMP43652 599 aa21.99■■□□□ 1.11
HOXC4-201ENST00000303406 CLK2P49760 499 aaKnown RBP21.99■■□□□ 1.11
HOXC4-201ENST00000303406 MMP14P50281 582 aa21.99■■□□□ 1.11
HOXC4-201ENST00000303406 ICA1Q05084 483 aa21.99■■□□□ 1.11
HOXC4-201ENST00000303406 SLFN13Q68D06 897 aa21.99■■□□□ 1.11
HOXC4-201ENST00000303406 LRRC8AQ8IWT6 810 aa21.99■■□□□ 1.11
HOXC4-201ENST00000303406 TBCKQ8TEA7 893 aa21.99■■□□□ 1.11
HOXC4-201ENST00000303406 GMCL1Q96IK5 515 aa21.99■■□□□ 1.11
HOXC4-201ENST00000303406 RMND1Q9NWS8 449 aa21.99■■□□□ 1.11
HOXC4-201ENST00000303406 MRPL12P52815 198 aaKnown RBP21.98■■□□□ 1.11
HOXC4-201ENST00000303406 ATP2B2Q01814 1243 aa21.98■■□□□ 1.11
HOXC4-201ENST00000303406 CACTINQ8WUQ7 758 aaKnown RBP21.98■■□□□ 1.11
HOXC4-201ENST00000303406 FAM151AQ8WW52 585 aa21.98■■□□□ 1.11
HOXC4-201ENST00000303406 COA7Q96BR5 231 aa21.98■■□□□ 1.11
HOXC4-201ENST00000303406 NAP1L4Q99733 375 aaKnown RBP21.98■■□□□ 1.11
HOXC4-201ENST00000303406 ZNRF3Q9ULT6 936 aa21.98■■□□□ 1.11
HOXC4-201ENST00000303406 COL4A5P29400 1685 aa21.98■■□□□ 1.11
HOXC4-201ENST00000303406 PSMD14O00487 310 aa21.97■■□□□ 1.11
HOXC4-201ENST00000303406 CCNT1O60563 726 aaKnown RBP21.97■■□□□ 1.11
HOXC4-201ENST00000303406 ZNF18P17022 549 aa21.97■■□□□ 1.11
HOXC4-201ENST00000303406 UBA7P41226 1012 aa21.97■■□□□ 1.11
HOXC4-201ENST00000303406 SEPT2Q15019 361 aa21.97■■□□□ 1.11
HOXC4-201ENST00000303406 DLGAP5Q15398 846 aa21.97■■□□□ 1.11
HOXC4-201ENST00000303406 LETM2Q2VYF4 491 aa21.97■■□□□ 1.11
HOXC4-201ENST00000303406 RBM26Q5T8P6 1007 aaKnown RBP21.97■■□□□ 1.11
HOXC4-201ENST00000303406 TTBK2Q6IQ55 1244 aa21.97■■□□□ 1.11
HOXC4-201ENST00000303406 CCDC125Q86Z20 511 aa21.97■■□□□ 1.11
HOXC4-201ENST00000303406 SIAH1Q8IUQ4 282 aa21.97■■□□□ 1.11
HOXC4-201ENST00000303406 CCDC150Q8NCX0 1101 aa21.97■■□□□ 1.11
HOXC4-201ENST00000303406 CUL5Q93034 780 aa21.97■■□□□ 1.11
HOXC4-201ENST00000303406 BIN2Q9UBW5 565 aaPredicted RBP21.97■■□□□ 1.11
HOXC4-201ENST00000303406 STAT6P42226 847 aa21.96■■□□□ 1.11
HOXC4-201ENST00000303406 SLC1A4P43007 532 aa21.96■■□□□ 1.11
HOXC4-201ENST00000303406 SPDYE2Q495Y8 402 aa21.96■■□□□ 1.11
HOXC4-201ENST00000303406 JAKMIP3Q5VZ66 844 aa21.96■■□□□ 1.11
HOXC4-201ENST00000303406 MCTP2Q6DN12 878 aa21.96■■□□□ 1.11
HOXC4-201ENST00000303406 TEX2Q8IWB9 1127 aa21.96■■□□□ 1.11
HOXC4-201ENST00000303406 NIM1KQ8IY84 436 aa21.96■■□□□ 1.11
HOXC4-201ENST00000303406 OGFOD1Q8N543 542 aa21.96■■□□□ 1.11
HOXC4-201ENST00000303406 FANCLQ9NW38 375 aa21.96■■□□□ 1.11
HOXC4-201ENST00000303406 ZNF70Q9UC06 446 aaPredicted RBP21.96■■□□□ 1.11
HOXC4-201ENST00000303406 USP17L10C9JJH3 530 aa21.96■■□□□ 1.11
HOXC4-201ENST00000303406 PPP1R11O60927 126 aaPredicted RBP21.96■■□□□ 1.11
HOXC4-201ENST00000303406 UBASH3AP57075 661 aa21.96■■□□□ 1.11
HOXC4-201ENST00000303406 FMR1Q06787 632 aaKnown RBP eCLIP21.96■■□□□ 1.111e-14■■■■■ 51.5
HOXC4-201ENST00000303406 CUL4BQ13620 913 aa21.96■■□□□ 1.11
HOXC4-201ENST00000303406 RRAGBQ5VZM2 374 aa21.96■■□□□ 1.11
HOXC4-201ENST00000303406 PPP4R3AQ6IN85 833 aa21.96■■□□□ 1.11
HOXC4-201ENST00000303406 KCTD1Q719H9 257 aa21.96■■□□□ 1.11
HOXC4-201ENST00000303406 CSRNP1Q96S65 589 aa21.96■■□□□ 1.11
HOXC4-201ENST00000303406 ZNF277Q9NRM2 450 aaPredicted RBP21.96■■□□□ 1.11
HOXC4-201ENST00000303406 PIM2Q9P1W9 311 aa21.96■■□□□ 1.11
HOXC4-201ENST00000303406 FAM196BA6NMK8 535 aa21.95■■□□□ 1.1
HOXC4-201ENST00000303406 SERPINC1P01008 464 aa21.95■■□□□ 1.1
HOXC4-201ENST00000303406 ATP1A3P13637 1013 aa21.95■■□□□ 1.1
HOXC4-201ENST00000303406 MTMR9Q96QG7 549 aa21.95■■□□□ 1.1
HOXC4-201ENST00000303406 MTRQ99707 1265 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms