RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 IQUBQ8NA54 791 aa10.89□□□□□ -0.67
TRIM55-201ENST00000276573 MLKLQ8NB16 471 aa10.89□□□□□ -0.67
TRIM55-201ENST00000276573 DCAF4Q8WV16 495 aa10.89□□□□□ -0.67
TRIM55-201ENST00000276573 FAM151AQ8WW52 585 aa10.89□□□□□ -0.67
TRIM55-201ENST00000276573 TMOD2Q9NZR1 351 aa10.89□□□□□ -0.67
TRIM55-201ENST00000276573 ZBTB12Q9Y330 459 aaPredicted RBP10.89□□□□□ -0.67
TRIM55-201ENST00000276573 PSME4Q14997 1843 aa10.89□□□□□ -0.67
TRIM55-201ENST00000276573 COL2A1P02458 1487 aaPredicted RBP10.89□□□□□ -0.67
TRIM55-201ENST00000276573 COL4A5P29400 1685 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 TCP10L2B9ZVM9 353 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 USP17L10C9JJH3 530 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 AFMP43652 599 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 RBM26Q5T8P6 1007 aaKnown RBP10.88□□□□□ -0.67
TRIM55-201ENST00000276573 JAKMIP3Q5VZ66 844 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 PPP1R18Q6NYC8 613 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 NIM1KQ8IY84 436 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 REXO1Q8N1G1 1221 aaKnown RBP10.88□□□□□ -0.67
TRIM55-201ENST00000276573 MTMR14Q8NCE2 650 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 CSRNP1Q96S65 589 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 KCNF1Q9H3M0 494 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 TMEM260Q9NX78 707 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 ATF5Q9Y2D1 282 aaPredicted RBP10.88□□□□□ -0.67
TRIM55-201ENST00000276573 CLRN2A0PK11 232 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 ZBTB5O15062 677 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 PPP1R11O60927 126 aaPredicted RBP10.88□□□□□ -0.67
TRIM55-201ENST00000276573 GDF11O95390 407 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 PTGS1P23219 599 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 ADCY7P51828 1080 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 JAG1P78504 1218 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 MYL5Q02045 173 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 ICA1Q05084 483 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 DPYDQ12882 1025 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 RRP1BQ14684 758 aaKnown RBP10.88□□□□□ -0.67
TRIM55-201ENST00000276573 LETM2Q2VYF4 491 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 PDXDC2PQ6P474 469 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 NEK8Q86SG6 692 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 AGBL3Q8NEM8 1001 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 TBCKQ8TEA7 893 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 HSD3B7Q9H2F3 369 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 RIC8AQ9NPQ8 531 aa10.88□□□□□ -0.67
TRIM55-201ENST00000276573 HERC5Q9UII4 1024 aaKnown RBP10.88□□□□□ -0.67
TRIM55-201ENST00000276573 KIF13BQ9NQT8 1826 aa10.87□□□□□ -0.67
TRIM55-201ENST00000276573 MYH4Q9Y623 1939 aa10.87□□□□□ -0.67
TRIM55-201ENST00000276573 F5H6K3 240 aa10.87□□□□□ -0.67
TRIM55-201ENST00000276573 CCNT1O60563 726 aaKnown RBP10.87□□□□□ -0.67
TRIM55-201ENST00000276573 CDC25AP30304 524 aa10.87□□□□□ -0.67
TRIM55-201ENST00000276573 SLC1A4P43007 532 aa10.87□□□□□ -0.67
TRIM55-201ENST00000276573 CXCL9Q07325 125 aa10.87□□□□□ -0.67
TRIM55-201ENST00000276573 KLRC3Q07444 240 aa10.87□□□□□ -0.67
TRIM55-201ENST00000276573 ORC2Q13416 577 aaPredicted RBP10.87□□□□□ -0.67
TRIM55-201ENST00000276573 SPDYE2Q495Y8 402 aa10.87□□□□□ -0.67
TRIM55-201ENST00000276573 DALRD3Q5D0E6 543 aaKnown RBP10.87□□□□□ -0.67
TRIM55-201ENST00000276573 GSDMAQ96QA5 445 aa10.87□□□□□ -0.67
TRIM55-201ENST00000276573 CCSER1Q9C0I3 900 aa10.87□□□□□ -0.67
TRIM55-201ENST00000276573 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRIM55-201ENST00000276573 DACH1Q9UI36 760 aa10.87□□□□□ -0.67
TRIM55-201ENST00000276573 MYO1BO43795 1136 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 EDIL3O43854 480 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 OFD1O75665 1012 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 GH2P01242 217 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 POLD1P28340 1107 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 CASP1P29466 404 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 LMOD1P29536 600 aaPredicted RBP10.86□□□□□ -0.67
TRIM55-201ENST00000276573 TXLNAP40222 546 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 MRPL12P52815 198 aaKnown RBP10.86□□□□□ -0.67
TRIM55-201ENST00000276573 FANCCQ00597 558 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 CCDC144BQ3MJ40 725 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 CT47A1Q5JQC4 288 aaPredicted RBP10.86□□□□□ -0.67
TRIM55-201ENST00000276573 FKBP1CQ5VVH2 108 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 GMCL1P1Q8NEA9 526 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 ENOX1Q8TC92 643 aaKnown RBP10.86□□□□□ -0.67
TRIM55-201ENST00000276573 IFNKQ9P0W0 207 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 CNTNAP1P78357 1384 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 RAD21O60216 631 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 OR52Z1P0C646 297 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 UBA7P41226 1012 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 CLK2P49760 499 aaKnown RBP10.86□□□□□ -0.67
TRIM55-201ENST00000276573 KARSQ15046 597 aaKnown RBP10.86□□□□□ -0.67
TRIM55-201ENST00000276573 KIAA1524Q8TCG1 905 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 STAMQ92783 540 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 GMCL1Q96IK5 515 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 ZBED3Q96IU2 234 aaPredicted RBP10.86□□□□□ -0.67
TRIM55-201ENST00000276573 AK8Q96MA6 479 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 MTRQ99707 1265 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 XPO4Q9C0E2 1151 aaKnown RBP10.86□□□□□ -0.67
TRIM55-201ENST00000276573 MTFR1LQ9H019 292 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 FANCLQ9NW38 375 aa10.86□□□□□ -0.67
TRIM55-201ENST00000276573 PP2D1A8MPX8 630 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 GTPBP6O43824 516 aaPredicted RBP10.85□□□□□ -0.67
TRIM55-201ENST00000276573 NEMFO60524 1076 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 ATP1A3P13637 1013 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 ERCC5P28715 1186 aaPredicted RBP10.85□□□□□ -0.67
TRIM55-201ENST00000276573 NOLC1Q14978 699 aaKnown RBP eCLIP10.85□□□□□ -0.67
TRIM55-201ENST00000276573 QRICH1Q2TAL8 776 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 RRAGBQ5VZM2 374 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 CIAPIN1Q6FI81 312 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 CUL5Q93034 780 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 PSTPIP2Q9H939 334 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 PYCARDQ9ULZ3 195 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 SYNPO2Q9UMS6 1093 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms