RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 IKZF4Q9H2S9 585 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.26□□□□□ -0.77
CKAP2-201ENST00000258607 ATP6V0A2Q9Y487 856 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 TUBGCP6Q96RT7 1819 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 ASTN2O75129 1339 aaPredicted RBP10.26□□□□□ -0.77
CKAP2-201ENST00000258607 COL14A1Q05707 1796 aaKnown RBP10.26□□□□□ -0.77
CKAP2-201ENST00000258607 MTIF2P46199 727 aaKnown RBP10.26□□□□□ -0.77
CKAP2-201ENST00000258607 RBM6P78332 1123 aaKnown RBP10.26□□□□□ -0.77
CKAP2-201ENST00000258607 APBA1Q02410 837 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 CABP7Q86V35 215 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 IGSF22Q8N9C0 903 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 ELMO3Q96BJ8 720 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 CCDC34Q96HJ3 373 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 C6orf50Q9HD87 102 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 FAM207AQ9NSI2 230 aaPredicted RBP10.26□□□□□ -0.77
CKAP2-201ENST00000258607 ZNF215Q9UL58 517 aaPredicted RBP10.26□□□□□ -0.77
CKAP2-201ENST00000258607 PCDHA6Q9UN73 950 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 SAMM50Q9Y512 469 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 PCDHA8Q9Y5H6 950 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 SRPRBQ9Y5M8 271 aaKnown RBP10.26□□□□□ -0.77
CKAP2-201ENST00000258607 LAMA4Q16363 1823 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 SPATA31A6Q5VVP1 1343 aa10.26□□□□□ -0.77
CKAP2-201ENST00000258607 PMS1P54277 932 aaKnown RBP10.25□□□□□ -0.77
CKAP2-201ENST00000258607 RNASE9P60153 205 aaKnown RBP10.25□□□□□ -0.77
CKAP2-201ENST00000258607 FUT2Q10981 343 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 R3HDM1Q15032 1099 aaKnown RBP10.25□□□□□ -0.77
CKAP2-201ENST00000258607 NONOQ15233 471 aaKnown RBP eCLIP10.25□□□□□ -0.77
CKAP2-201ENST00000258607 TEX35Q5T0J7 233 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 TCERG1LQ5VWI1 586 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 SLFN13Q68D06 897 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 LRWD1Q9UFC0 647 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 PCDHA4Q9UN74 947 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 SHANK3Q9BYB0 1731 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 ZNF500O60304 480 aaPredicted RBP10.25□□□□□ -0.77
CKAP2-201ENST00000258607 PDHBP11177 359 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 CASP14P31944 242 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 PDE6BP35913 854 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 CDR1P51861 262 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 NCAPHQ15003 741 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 ELF2Q15723 593 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 NBPF9Q3BBW0 867 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 PPP4R3BQ5MIZ7 849 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 TOGARAM2Q6ZUX3 1019 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 ACRBPQ8NEB7 543 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 PURBQ96QR8 312 aaKnown RBP10.25□□□□□ -0.77
CKAP2-201ENST00000258607 SLF1Q9BQI6 1058 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 ZNF287Q9HBT7 754 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 PPP6R2O75170 966 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 NPR1P16066 1061 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 DPEP1P16444 411 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 PRCPP42785 496 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 JAG1P78504 1218 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 PABPC4Q13310 644 aaKnown RBP eCLIP10.25□□□□□ -0.775e-7■■□□□ 12.6
CKAP2-201ENST00000258607 CALCRLQ16602 461 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 KSR1Q8IVT5 923 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 PIGOQ8TEQ8 1089 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 MASTLQ96GX5 879 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.25□□□□□ -0.77
CKAP2-201ENST00000258607 TMOD2Q9NZR1 351 aa10.25□□□□□ -0.77
CKAP2-201ENST00000258607 NWD2Q9ULI1 1742 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 USP54Q70EL1 1684 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 CRYBG1Q9Y4K1 1723 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 E9PMD0 336 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 ZBTB39O15060 712 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 ABL1P00519 1130 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 IBSPP21815 317 aaPredicted RBP10.24□□□□□ -0.77
CKAP2-201ENST00000258607 ALDH1B1P30837 517 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 MATR3P43243 847 aaKnown RBP eCLIP10.24□□□□□ -0.772e-6■■■□□ 18.3
CKAP2-201ENST00000258607 NPY5RQ15761 445 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 CAPZA3Q96KX2 299 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 PSTPIP2Q9H939 334 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 NLRC4Q9NPP4 1024 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 MTMR4Q9NYA4 1195 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 ENC1O14682 589 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 ACTN4O43707 911 aaKnown RBP10.24□□□□□ -0.77
CKAP2-201ENST00000258607 DDAH1O94760 285 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 MED15Q96RN5 788 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 MTRQ99707 1265 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 TRIM10Q9UDY6 481 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 GUCA1BQ9UMX6 200 aa10.24□□□□□ -0.77
CKAP2-201ENST00000258607 B4DLN1 442 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 TPM3P06753 285 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 ADCY7P51828 1080 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 RBL2Q08999 1139 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 LLGL1Q15334 1064 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 DLGAP5Q15398 846 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 ERCC6LQ2NKX8 1250 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 APOBEC3HQ6NTF7 200 aaKnown RBP10.23□□□□□ -0.77
CKAP2-201ENST00000258607 MNS1Q8NEH6 495 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.23□□□□□ -0.77
CKAP2-201ENST00000258607 EXOC1Q9NV70 894 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 NUP188Q5SRE5 1749 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 GPR75-ASB3A0A0A6YYF3 556 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 STXBP3O00186 592 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 PSMD14O00487 310 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 SEMA3EO15041 775 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 TRIM21P19474 475 aaKnown RBP10.23□□□□□ -0.77
CKAP2-201ENST00000258607 CALML3P27482 149 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 CYP27A1Q02318 531 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 MKRN3Q13064 507 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 739.2 ms