RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 UBA5Q9GZZ9 404 aa21.82■■□□□ 1.08
UPK3B-201ENST00000257632 RNF208Q9H0X6 261 aa21.82■■□□□ 1.08
UPK3B-201ENST00000257632 RANBP17Q9H2T7 1088 aaKnown RBP21.82■■□□□ 1.08
UPK3B-201ENST00000257632 CCPG1Q9ULG6 757 aa21.82■■□□□ 1.08
UPK3B-201ENST00000257632 ZNF536O15090 1300 aa21.81■■□□□ 1.08
UPK3B-201ENST00000257632 HTTP42858 3142 aa21.81■■□□□ 1.08
UPK3B-201ENST00000257632 ALAS1P13196 640 aa21.81■■□□□ 1.08
UPK3B-201ENST00000257632 TKFCQ3LXA3 575 aa21.81■■□□□ 1.08
UPK3B-201ENST00000257632 MFSD14CQ5VZR4 134 aa21.81■■□□□ 1.08
UPK3B-201ENST00000257632 NFXL1Q6ZNB6 911 aa21.81■■□□□ 1.08
UPK3B-201ENST00000257632 RASEFQ8IZ41 740 aa21.81■■□□□ 1.08
UPK3B-201ENST00000257632 UNC93B1Q9H1C4 597 aa21.81■■□□□ 1.08
UPK3B-201ENST00000257632 SENP2Q9HC62 589 aa21.81■■□□□ 1.08
UPK3B-201ENST00000257632 RNF146Q9NTX7 359 aa21.81■■□□□ 1.08
UPK3B-201ENST00000257632 KIAA0100Q14667 2235 aaKnown RBP21.8■■□□□ 1.08
UPK3B-201ENST00000257632 RBBP6Q7Z6E9 1792 aaKnown RBP21.8■■□□□ 1.08
UPK3B-201ENST00000257632 POTEFA5A3E0 1075 aa21.8■■□□□ 1.08
UPK3B-201ENST00000257632 CCDC69A6NI79 296 aa21.8■■□□□ 1.08
UPK3B-201ENST00000257632 COBLO75128 1261 aa21.8■■□□□ 1.08
UPK3B-201ENST00000257632 ICAM1P05362 532 aa21.8■■□□□ 1.08
UPK3B-201ENST00000257632 HSPA4P34932 840 aa21.8■■□□□ 1.08
UPK3B-201ENST00000257632 TRIM32Q13049 653 aa21.8■■□□□ 1.08
UPK3B-201ENST00000257632 TSGA10IPQ3SY00 556 aa21.8■■□□□ 1.08
UPK3B-201ENST00000257632 ANKRD35Q8N283 1001 aa21.8■■□□□ 1.08
UPK3B-201ENST00000257632 TMTC2Q8N394 836 aa21.8■■□□□ 1.08
UPK3B-201ENST00000257632 CPVLQ9H3G5 476 aa21.8■■□□□ 1.08
UPK3B-201ENST00000257632 ACAD9Q9H845 621 aa21.8■■□□□ 1.08
UPK3B-201ENST00000257632 LY9Q9HBG7 655 aa21.8■■□□□ 1.08
UPK3B-201ENST00000257632 SH2B2O14492 632 aaPredicted RBP21.79■■□□□ 1.08
UPK3B-201ENST00000257632 EPB41L2O43491 1005 aaKnown RBP21.79■■□□□ 1.08
UPK3B-201ENST00000257632 PGK2P07205 417 aa21.79■■□□□ 1.08
UPK3B-201ENST00000257632 PRKAR2AP13861 404 aaKnown RBP21.79■■□□□ 1.08
UPK3B-201ENST00000257632 NUP133Q8WUM0 1156 aa21.79■■□□□ 1.08
UPK3B-201ENST00000257632 TRERF1Q96PN7 1200 aa21.79■■□□□ 1.08
UPK3B-201ENST00000257632 LRRC2Q9BYS8 371 aa21.79■■□□□ 1.08
UPK3B-201ENST00000257632 HMX1Q9NP08 348 aaPredicted RBP21.79■■□□□ 1.08
UPK3B-201ENST00000257632 GPHNQ9NQX3 736 aaPredicted RBP21.79■■□□□ 1.08
UPK3B-201ENST00000257632 PNMA2Q9UL42 364 aa21.79■■□□□ 1.08
UPK3B-201ENST00000257632 PLXNA1Q9UIW2 1896 aa21.79■■□□□ 1.08
UPK3B-201ENST00000257632 GRM4Q14833 912 aa21.78■■□□□ 1.08
UPK3B-201ENST00000257632 ADCK5Q3MIX3 580 aa21.78■■□□□ 1.08
UPK3B-201ENST00000257632 STAG2Q8N3U4 1231 aa21.78■■□□□ 1.08
UPK3B-201ENST00000257632 VAT1LQ9HCJ6 419 aa21.78■■□□□ 1.08
UPK3B-201ENST00000257632 FLRT1Q9NZU1 646 aa21.78■■□□□ 1.08
UPK3B-201ENST00000257632 RPTORQ8N122 1335 aa21.78■■□□□ 1.08
UPK3B-201ENST00000257632 KLRF2D3W0D1 207 aa21.77■■□□□ 1.08
UPK3B-201ENST00000257632 HMGB1P09429 215 aaKnown RBP21.77■■□□□ 1.08
UPK3B-201ENST00000257632 COL9A3Q14050 684 aaPredicted RBP21.77■■□□□ 1.08
UPK3B-201ENST00000257632 CDC37Q16543 378 aaPredicted RBP21.77■■□□□ 1.08
UPK3B-201ENST00000257632 OLFML2BQ68BL8 750 aa21.77■■□□□ 1.08
UPK3B-201ENST00000257632 DHX32Q7L7V1 743 aaKnown RBP21.77■■□□□ 1.08
UPK3B-201ENST00000257632 ADGRF4Q8IZF3 695 aa21.77■■□□□ 1.08
UPK3B-201ENST00000257632 ZNF654Q8IZM8 581 aa21.77■■□□□ 1.08
UPK3B-201ENST00000257632 JAKMIP1Q96N16 626 aaKnown RBP21.77■■□□□ 1.08
UPK3B-201ENST00000257632 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.77■■□□□ 1.08
UPK3B-201ENST00000257632 MAD2L2Q9UI95 211 aa21.77■■□□□ 1.08
UPK3B-201ENST00000257632 SNX14Q9Y5W7 946 aa21.77■■□□□ 1.08
UPK3B-201ENST00000257632 WDR19Q8NEZ3 1342 aa21.77■■□□□ 1.07
UPK3B-201ENST00000257632 MYH6P13533 1939 aa21.76■■□□□ 1.07
UPK3B-201ENST00000257632 DDAH1O94760 285 aa21.76■■□□□ 1.07
UPK3B-201ENST00000257632 GJB1P08034 283 aa21.76■■□□□ 1.07
UPK3B-201ENST00000257632 TAL1P17542 331 aaPredicted RBP21.76■■□□□ 1.07
UPK3B-201ENST00000257632 CYP2C19P33261 490 aa21.76■■□□□ 1.07
UPK3B-201ENST00000257632 LIFRP42702 1097 aa21.76■■□□□ 1.07
UPK3B-201ENST00000257632 CACNB2Q08289 660 aaPredicted RBP21.76■■□□□ 1.07
UPK3B-201ENST00000257632 TROAPQ12815 778 aa21.76■■□□□ 1.07
UPK3B-201ENST00000257632 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.76■■□□□ 1.07
UPK3B-201ENST00000257632 CTCFLQ8NI51 663 aaPredicted RBP21.76■■□□□ 1.07
UPK3B-201ENST00000257632 KCNB2Q92953 911 aa21.76■■□□□ 1.07
UPK3B-201ENST00000257632 MAML3Q96JK9 1138 aa21.76■■□□□ 1.07
UPK3B-201ENST00000257632 PALM3A6NDB9 673 aaPredicted RBP21.75■■□□□ 1.07
UPK3B-201ENST00000257632 EN2P19622 333 aaPredicted RBP21.75■■□□□ 1.07
UPK3B-201ENST00000257632 FGD1P98174 961 aa21.75■■□□□ 1.07
UPK3B-201ENST00000257632 ZNF792Q3KQV3 632 aa21.75■■□□□ 1.07
UPK3B-201ENST00000257632 MAP3K21Q5TCX8 1036 aa21.75■■□□□ 1.07
UPK3B-201ENST00000257632 SYNE3Q6ZMZ3 975 aa21.75■■□□□ 1.07
UPK3B-201ENST00000257632 TCEANC2Q96MN5 208 aa21.75■■□□□ 1.07
UPK3B-201ENST00000257632 DEFB118Q96PH6 123 aa21.75■■□□□ 1.07
UPK3B-201ENST00000257632 MYL10Q9BUA6 226 aa21.75■■□□□ 1.07
UPK3B-201ENST00000257632 USP26Q9BXU7 913 aa21.75■■□□□ 1.07
UPK3B-201ENST00000257632 DIS3Q9Y2L1 958 aaKnown RBP21.75■■□□□ 1.07
UPK3B-201ENST00000257632 SLC12A7Q9Y666 1083 aa21.75■■□□□ 1.07
UPK3B-201ENST00000257632 SMCHD1A6NHR9 2005 aa21.75■■□□□ 1.07
UPK3B-201ENST00000257632 EIF5BO60841 1220 aaKnown RBP21.74■■□□□ 1.07
UPK3B-201ENST00000257632 PSMA5P28066 241 aa21.74■■□□□ 1.07
UPK3B-201ENST00000257632 KIF5BP33176 963 aa21.74■■□□□ 1.07
UPK3B-201ENST00000257632 USH1GQ495M9 461 aa21.74■■□□□ 1.07
UPK3B-201ENST00000257632 MUM1L1Q5H9M0 696 aa21.74■■□□□ 1.07
UPK3B-201ENST00000257632 BLOC1S2Q6QNY1 142 aa21.74■■□□□ 1.07
UPK3B-201ENST00000257632 NSMFQ6X4W1 530 aa21.74■■□□□ 1.07
UPK3B-201ENST00000257632 U2AF1L4Q8WU68 220 aaKnown RBP21.74■■□□□ 1.07
UPK3B-201ENST00000257632 JMJD4Q9H9V9 463 aa21.74■■□□□ 1.07
UPK3B-201ENST00000257632 A1CFQ9NQ94 594 aaKnown RBP21.74■■□□□ 1.07
UPK3B-201ENST00000257632 PAK6Q9NQU5 681 aaPredicted RBP21.74■■□□□ 1.07
UPK3B-201ENST00000257632 PFASO15067 1338 aa21.74■■□□□ 1.07
UPK3B-201ENST00000257632 POTEB2H3BUK9 544 aa21.73■■□□□ 1.07
UPK3B-201ENST00000257632 CALM1P0DP23 149 aa21.73■■□□□ 1.07
UPK3B-201ENST00000257632 CALM2P0DP24 149 aa21.73■■□□□ 1.07
UPK3B-201ENST00000257632 CALM3P0DP25 149 aa21.73■■□□□ 1.07
UPK3B-201ENST00000257632 CNGA1P29973 690 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms