RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 LrmpQ60664 539 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Sik1Q60670 779 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Cep131Q62036 1060 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Trim6Q8BGE7 488 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Smim5Q8BT42 78 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Nup133Q8R0G9 1155 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Rbm19Q8R3C6 952 aaKnown RBP15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Alpk1Q9CXB8 1231 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Lztfl1Q9JHQ5 299 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 ThegQ9JMB1 375 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Mapk8ip1Q9WVI9 707 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Akap2O54931 893 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Nap1l2P51860 460 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Zfp781Q0P5U5 243 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Hirip3Q8BLH7 601 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Fbxo18Q8K2I9 1042 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Erlin1Q91X78 346 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Sh3bp5lQ99LH9 392 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Coro7Q9D2V7 922 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Lonrf3Q9D4H7 753 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 NgdnQ9DB96 315 aaKnown RBP15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Arl6ip4Q9JM93 229 aa15.15■□□□□ 0.02
Clcn4-203ENSMUST00000210061 Kndc1Q0KK55 1742 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Fam186bD3Z420 943 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Ppef2O35385 757 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Capza3P70190 299 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Antxr2Q6DFX2 487 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Lrrc15Q80X72 579 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 D130040H23RikQ8BII3 405 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Miga2Q8BK03 593 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Usp27Q8CEG8 438 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Cdk17Q8K0D0 523 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Usp15Q8R5H1 981 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Efhd1Q9D4J1 240 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Mkrn1Q9QXP6 481 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Sorbs3Q9R1Z8 733 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Vmn2r71L7N2D8 855 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Stag2O35638 1231 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Aco1P28271 889 aaKnown RBP15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Ftl1P29391 183 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Brinp3Q499E0 766 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Klra4Q60651 263 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 DlatQ8BMF4 642 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Krt82Q99M74 516 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Cd2apQ9JLQ0 637 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Prl2c5Q9JLV9 222 aa15.14■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Frmpd4A2AFR3 1320 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Slc39a2G3X943 309 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Foxn3Q499D0 457 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Zc3h12cQ5DTV4 884 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Myo19Q5SV80 963 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Krit1Q6S5J6 736 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 LRWD1Q8BUI3 648 aaKnown RBP15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Atp1a1Q8VDN2 1023 aaKnown RBP15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Pla2g12bQ99P27 195 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Rpf2Q9JJ80 306 aaKnown RBP15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Klra17Q9JMA4 273 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Nr2e3Q9QXZ7 395 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Peg12Q9WVA7 283 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Prl2c3P04768 224 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Usp53P15975 1069 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Wee1P47810 646 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Gfpt1P47856 697 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Tekt3Q6X6Z7 490 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Trim9Q8C7M3 817 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Prl7b1Q8CGZ9 251 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Grin3bQ91ZU9 1003 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 1700018B08RikQ9DA83 213 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Pkd2l2Q9JLG4 621 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Angptl3Q9R182 455 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Psma7Q9Z2U0 248 aa15.13■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Gm36210A0A1B0GS00 229 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Scg2Q03517 617 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Tbc1d2bQ3U0J8 965 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Asic3Q6X1Y6 530 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Ppm1eQ80TL0 749 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Mmgt1Q8K273 131 aaKnown RBP15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Osbpl1aQ91XL9 950 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Git2Q9JLQ2 708 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Nup98Q6PFD9 1816 aaKnown RBP15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 JcadQ5DTX6 1320 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Adgra3Q7TT36 1310 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Bpifb4A2BGH0 617 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Chrna9G3X8Z7 479 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Ssrp1Q08943 708 aaKnown RBP15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Exoc5Q3TPX4 708 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Lrrfip1Q3UZ39 729 aaKnown RBP15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Ccdc157Q5SPX1 718 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Cdcp1Q5U462 833 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Ezh2Q61188 746 aaKnown RBP15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Cd37Q61470 281 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Fkbp3Q62446 224 aaKnown RBP15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Asic1Q6NXK8 526 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Mtss1lQ6P9S0 715 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Kctd3Q8BFX3 815 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 SowahdQ8BY98 327 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Spats2Q8K1N4 545 aaKnown RBP15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Trub2Q91WG3 331 aaKnown RBP15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Cabp7Q91ZM8 215 aa15.12■□□□□ 0.01
Clcn4-203ENSMUST00000210061 Dock5B2RY04 1868 aa15.11■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms