RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Ints5Q8CHT3 1018 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Nup58Q8R332 587 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Atp1a1Q8VDN2 1023 aaKnown RBP9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Znf704Q9ERQ3 566 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 GsdmeQ9Z2D3 512 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Cdc27A2A6Q5 825 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ano3A2AHL1 981 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Rpl13P47963 211 aaKnown RBP9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Rps8P62242 208 aaKnown RBP9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Nlrp2Q4PLS0 1046 aaKnown RBP9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Nek5Q7TSC3 627 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Skor1Q8BX46 964 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Stx17Q9D0I4 301 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Abhd2Q9QXM0 425 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Nr2e3Q9QXZ7 395 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Rasal2E9PW37 1286 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 ChkbO55229 394 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Llgl2Q3TJ91 1027 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 NntQ61941 1086 aaKnown RBP9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Irak1Q62406 710 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Q91WD4 421 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Serpinb12Q9D7P9 423 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Pfkfb3A7UAK5 555 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Tdo2P48776 406 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Tax1bp1Q3UKC1 814 aaKnown RBP9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ankrd13cQ3UX43 541 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Prl2c1Q5SVL9 228 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 ZyxQ62523 564 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ttc26Q8BS45 554 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Hook3Q8BUK6 718 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 EpgnQ924X1 152 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Cul5Q9D5V5 780 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ric1Q69ZJ7 1422 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Krt24A1L317 512 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Arhgap6O54834 987 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 VimP20152 466 aaKnown RBP9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Fam89aQ14BJ1 175 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ddx49Q4FZF3 480 aaKnown RBP9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Slc9a1Q61165 820 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Krt40Q6IFX3 439 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Cep70Q6IQY5 616 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Herc4Q6PAV2 1057 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Klhl7Q8BUL5 586 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 CerkQ8K4Q7 531 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Tmem134Q8R0J4 195 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Xrcc4Q924T3 326 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 2310002L09RikQ9D7L5 217 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Tacc3Q9JJ11 631 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Klra1P20937 262 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Lmnb2P21619 596 aaKnown RBP9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Cdh15P33146 784 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Chp1P61022 195 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 HelbQ6NVF4 1074 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Fmnl3Q6ZPF4 1028 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Rassf10Q8BL43 508 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ccdc28aQ8CEI3 192 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Eif3cQ8R1B4 911 aaKnown RBP9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Usp15Q8R5H1 981 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Themis2Q91YX0 663 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Alpk1Q9CXB8 1231 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Gkap1Q9JMB0 366 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Foxo4Q9WVH3 505 aa9.28□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Frmd7A2AD83 703 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Scg2Q03517 617 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Kcnb1Q03717 857 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Nhej1Q3KNJ2 295 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 VrtnQ3SYK4 740 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Prpf38aQ4FK66 312 aaKnown RBP9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Rbm15bQ6PHZ5 887 aaKnown RBP9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Spag7Q7TNE3 227 aaKnown RBP9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Otop3Q80UF9 577 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Susd4Q8BH32 490 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Mettl5Q8K1A0 209 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Fbxo18Q8K2I9 1042 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Srgap2Q91Z67 1071 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Tsnaxip1Q99P25 704 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Camta1A2A891 1682 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Samd15F6XZJ7 620 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Eftud2O08810 971 aaKnown RBP9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Stmn4P63042 189 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Kif22Q3V300 660 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Slc9a2Q3ZAS0 814 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Spata16Q8C636 571 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Dact1Q8R4A3 778 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Eif4a3Q91VC3 411 aaKnown RBP9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Dbndd1Q9CZ00 160 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Myo1hQ9D6A1 958 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Rwdd2aQ9D9S3 292 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 NapaQ9DB05 295 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Sgpp1Q9JI99 430 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Cdhr2E9Q7P9 1308 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Ubr1O70481 1757 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 AW822073A0A0N4SUK1 652 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Nck2O55033 380 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Nf2P46662 596 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Il15P48346 162 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Mrps31Q61733 384 aaKnown RBP9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Cracr2bQ80ZJ8 394 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Haus1Q8BHX1 278 aa9.27□□□□□ -0.93
Bdnf-210ENSMUST00000111051 Gimap5Q8BWF2 308 aa9.27□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms