RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Sdad1Q80UZ2 687 aaKnown RBP8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Znf18Q810A1 556 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Eno4Q8C042 619 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Spata32Q8C5V0 334 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 GlyctkQ8QZY2 523 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ppp2r5dQ91V89 594 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Rrp1bQ91YK2 724 aaKnown RBP8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Snrnp35Q9D384 244 aa8.36□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ddx23D3Z0M9 819 aaKnown RBP8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Dnajc21E9Q8D0 531 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ftl1P29391 183 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Rhbdl3P58873 404 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Vps33bP59016 617 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Krt86P97861 486 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Rnf187Q8BFX1 236 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Kif2bQ8C0N1 668 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tbc1d23Q8K0F1 684 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 St5Q924W7 1134 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Smco2Q9DA21 347 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ubr2Q6WKZ8 1755 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Gm13023A2A8N2 498 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Otud7bB2RUR8 840 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Bnip3O55003 187 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Chp1P61022 195 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Gas8Q60779 478 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Sycp1Q62209 993 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ccdc148Q6P5U8 527 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Smarca1Q6PGB8 1046 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Pabpc4Q6PHQ9 660 aaKnown RBP8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Epc1Q8C9X6 813 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ccdc38Q8CDN8 563 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tmem60Q8K174 133 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Fbxo18Q8K2I9 1042 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Matr3Q8K310 846 aaKnown RBP8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 MlphQ91V27 590 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Scrn1Q9CZC8 414 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tmem47Q9JJG6 181 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Abhd2Q9QXM0 425 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Myo1cQ9WTI7 1063 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 AdnpQ9Z103 1108 aaKnown RBP8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Psma7Q9Z2U0 248 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Abca15E9PWH4 1668 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 DnttP09838 530 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tcp11Q01755 566 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Bbof1Q3V079 533 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Hpcal4Q8BGZ1 191 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tmem134Q8R0J4 195 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ndufv1Q91YT0 464 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Apobec3Q99J72 440 aaKnown RBP8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tktl2Q9D4D4 627 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Tube1Q9D6T1 475 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Trmt112Q9DCG9 125 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Lztfl1Q9JHQ5 299 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Cd2apQ9JLQ0 637 aa8.35□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Scgb2b18A0A087WPA9 112 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Herc3A6H6S0 1050 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Spocd1B1ASB6 936 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Vmn2r68L7N2B3 851 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Klra1P20937 262 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Siah1aP61092 282 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 LbrQ3U9G9 626 aaKnown RBP8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ccdc114Q3UX62 658 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Adck2Q6NSR3 617 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ccdc189Q6NZQ0 333 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Galnt17Q7TT15 598 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Trerf1Q8BXJ2 1205 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ifih1Q8R5F7 1025 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Adcy3Q8VHH7 1145 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Pcdhb5Q91XZ5 792 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Plcb1Q9Z1B3 1216 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Abca3Q8R420 1704 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Zfand4D3Z3C6 739 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ugt1a8D3Z748 530 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ugt1a10E9PXN7 530 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Oxr1Q4KMM3 866 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Myo19Q5SV80 963 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ankrd13dQ6PD24 605 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 RragaQ80X95 313 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Eps8l1Q8R5F8 716 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Atp1a1Q8VDN2 1023 aaKnown RBP8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ubxn1Q922Y1 297 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Bap1Q99PU7 728 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Alpk1Q9CXB8 1231 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Trmt44Q9D2Q2 713 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 2310002L09RikQ9D7L5 217 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ccnt1Q9QWV9 724 aaKnown RBP8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 GsdmeQ9Z2D3 512 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Col4a1P02463 1669 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ank1Q02357 1862 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Nfxl1E9Q8I7 918 aaKnown RBP8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ankrd35E9Q9D8 996 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Mx1P09922 631 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Alppl2P24823 529 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Kcnb1Q03717 857 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Hdhd2Q3UGR5 259 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ccdc157Q5SPX1 718 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Ccna1Q61456 421 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Glg1Q61543 1175 aaKnown RBP8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Bbs9Q811G0 885 aa8.34□□□□□ -1.07
Bdnf-207ENSMUST00000111047 Armcx3Q8BHS6 379 aa8.34□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms