RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Lrrfip2Q91WK0 415 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Nmd3Q99L48 503 aaKnown RBP13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Rbm8aQ9CWZ3 174 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Apol7aB2RT54 418 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Rnpc3Q3UZ01 514 aaKnown RBP13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Fam169aQ5XG69 665 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Cfap206Q6PE87 622 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Lmbr1lQ9D1E5 489 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Get4Q9D1H7 327 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Cdk5rap2Q8K389 1822 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Gdap1O88741 358 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Gbp8Q2V6D6 525 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Trmt1Q3TX08 663 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 A1cfQ5YD48 595 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Arhgef1Q61210 920 aaKnown RBP13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Ggt6Q6PDE7 497 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Zkscan8Q8BSL0 588 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Slc39a6Q8C145 765 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 IrgcQ8C262 412 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Pde5aQ8CG03 865 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Q9CR55 154 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Scgb2b20Q9JI02 112 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Ehbp1l1Q99MS7 1716 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Rgs12Q8CGE9 1381 aa13.16□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Sycp2lA0A0M3U1B0 842 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Rcn1Q05186 325 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 PsdQ5DTT2 1024 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Trim68Q8K243 485 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 ThegQ9JMB1 375 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Tubgcp6G5E8P0 1769 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Rsrc2A2RTL5 376 aaKnown RBP13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 CidebO70303 219 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Xirp1O70373 1129 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Zbtb16Q3UQ17 673 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Lamc2Q61092 1191 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Krt39Q6IFX4 482 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Soga3Q6NZL0 945 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Ube2q1Q7TSS2 422 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Camsap3Q80VC9 1252 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 E330017A01RikQ8BU47 192 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Edc3Q8K2D3 508 aaKnown RBP13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Golph3lQ8R088 285 aaKnown RBP13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Uhrf1bp1B2KF50 1429 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Ccdc82Q6PG04 518 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Epn1Q80VP1 575 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Tsen34Q8BMZ5 316 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Iqcb1Q8BP00 598 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Lrrc42Q8R2U7 421 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Fam114a2Q8VE88 497 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Vps16Q920Q4 839 aa13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Pacsin2Q9WVE8 486 aaKnown RBP13.15□□□□□ -0.3
Bdnf-205ENSMUST00000111045 Disp3A3KFU9 1347 aa13.15□□□□□ -0.31
Bdnf-205ENSMUST00000111045 LtkP08923 888 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Senp1P59110 640 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Ttc19Q8CC21 365 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Tbc1d23Q8K0F1 684 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Terf2ipQ91VL8 393 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Rrs1Q9CYH6 365 aaKnown RBP13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Dbn1Q9QXS6 706 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Nrxn1Q9CS84 1514 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Myo1aO88329 1043 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Rps6ka1P18653 724 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Znf652Q5DU09 608 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Fkbp5Q64378 456 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Mfn1Q811U4 741 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Spata2Q8K004 515 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Srfbp1Q9CZ91 441 aaKnown RBP13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Stx12Q9ER00 274 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Tlr7P58681 1050 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Rnf10Q3UIW5 804 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Tmem232Q5K6N0 675 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 SkiQ60698 725 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Nlrp9bQ66X22 1003 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Cpa1Q7TPZ8 419 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Fam210aQ8BGY7 273 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Cnot10Q8BH15 744 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 4930572O03RikQ8C5Y0 211 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Smc6Q924W5 1097 aa13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Mybbp1aQ7TPV4 1344 aaKnown RBP13.14□□□□□ -0.31
Bdnf-205ENSMUST00000111045 1700024B05RikE9Q6D7 167 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Map3k7Q62073 579 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 TrhQ62361 256 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Kif11Q6P9P6 1052 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Pcdha5Q91Y15 934 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Foxp4Q9DBY0 795 aaKnown RBP13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Vstm4T1NXB5 319 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Znf335A2A5K6 1337 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Aox4Q3TYQ9 1336 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 PtpruB1AUH1 1446 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 AglF8VPN4 1532 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Ppfia1B2RXQ2 1266 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Ccdc175E9PVB3 822 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Smg7Q5RJH6 1138 aaKnown RBP13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Gdap2Q9DBL2 498 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Rabgap1A2AWA9 1064 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 InaP46660 501 aa13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Ltv1Q6NSQ7 470 aaKnown RBP13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Ddx54Q8K4L0 874 aaKnown RBP13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 Wbp11Q923D5 641 aaKnown RBP13.13□□□□□ -0.31
Bdnf-205ENSMUST00000111045 NsmfQ99NF2 532 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms