RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Ckap2Q3V1H1 664 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Cep112Q5PR68 954 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Sval3Q76I99 144 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Znf771Q8BJ90 317 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Tspyl4Q8VD63 406 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 NapgQ9CWZ7 312 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Ercc4Q9QZD4 917 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Cyp2ab1S4R196 498 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Scgb2b18A0A087WPA9 112 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Chd5A2A8L1 1946 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Tbc1d8bA3KGB4 1114 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Usp17lbE9Q9U0 468 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Phldb3E9QAF4 648 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Alppl2P24823 529 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Kifap3P70188 793 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Ccdc88aQ5SNZ0 1873 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Dnph1Q80VJ3 173 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Fam177a1Q8BR63 207 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Cdk8Q8R3L8 464 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Col20a1Q923P0 1320 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 ToporslQ9D2F8 683 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 UvssaQ9D479 717 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Irx5Q9JKQ4 484 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Tob2Q9JM55 345 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Itga2bQ9QUM0 1033 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Hs6st3Q9QYK4 470 aa8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Knop1Q9Z2Q2 478 aaKnown RBP8.04□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Gcom1E9PZ54 550 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Scgb2b19J3QM75 112 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Eya3P97480 510 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Cdr2P97817 455 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 MyzapQ3UIJ9 466 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Tmem232Q5K6N0 675 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 AsnsQ61024 561 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Best3Q6H1V1 669 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Ccdc93Q7TQK5 629 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Ppm1fQ8CGA0 452 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Prpf6Q91YR7 941 aaKnown RBP8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Mfap3Q922T2 349 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Tmem39aQ9CYC3 486 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Gpaa1Q9WTK3 621 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Sned1Q70E20 1403 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Gm30191A0A0U1RNT7 187 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Ugt1a8D3Z748 530 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Ugt1a10E9PXN7 530 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Gucy1a2F8VQK3 730 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Ampd3O08739 766 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Copb2O55029 905 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Atp8b1Q148W0 1251 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Acbd5Q5XG73 508 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Caps2Q8BUG5 550 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Nod2Q8K3Z0 1020 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Srgap2Q91Z67 1071 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Ccdc83Q9D4V3 305 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Mad2l2Q9D752 211 aa8.03□□□□□ -1.12
Clrn1-202ENSMUST00000055636 Eef2P58252 858 aaKnown RBP8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 AaasP58742 546 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Chp1P61022 195 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Cct5P80316 541 aaKnown RBP8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Zmym1Q3TJB1 983 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Olfr121Q5CZY0 321 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Tm4sf1Q64302 202 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Adam6bQ6IMH7 756 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Adck2Q6NSR3 617 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 DaglaQ6WQJ1 1044 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Dusp9Q7TNL7 452 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Kctd3Q8BFX3 815 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Cep85Q8BMK0 761 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Apol10aQ8CCA5 318 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Atxn7Q8R4I1 867 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Mis18aQ9CZJ6 204 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Coro7Q9D2V7 922 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Fam217aQ9D9W6 419 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Hsd3b7Q9EQC1 369 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Tmem47Q9JJG6 181 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Plekhg2Q6KAU7 1340 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Gm5580A0A0N4SVP8 411 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Akap2O54931 893 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Tpp1O89023 562 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Kcna1P16388 495 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Traf3ip1Q149C2 625 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Fam178bQ24JP3 464 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Ppp1r7Q3UM45 361 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 MtrrQ8C1A3 696 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 AdarQ99MU3 1178 aaKnown RBP8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Sept14Q9DA97 430 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Nfu1Q9QZ23 255 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Rgs17Q9QZB0 210 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Klrc1Q9Z202 244 aa8.02□□□□□ -1.13
Clrn1-202ENSMUST00000055636 4932429P05RikA2ADI4 785 aa8.01□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Cnbd1B1AWM0 430 aa8.01□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Enc1O35709 589 aa8.01□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Klrk1O54709 232 aa8.01□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Tcp11Q01755 566 aa8.01□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Mars2Q499X9 586 aaKnown RBP8.01□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Sun3Q5SS91 320 aa8.01□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Tsr1Q5SWD9 803 aa8.01□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Arhgef2Q60875 985 aa8.01□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Epn1Q80VP1 575 aa8.01□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Gga3Q8BMI3 718 aa8.01□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms