RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Strn3Q9ERG2 796 aa10.76□□□□□ -0.69
Syne1-201ENSMUST00000041639 Myom2Q14BI5 1463 aa10.76□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ccdc175E9PVB3 822 aa10.76□□□□□ -0.69
Syne1-201ENSMUST00000041639 Arid3aQ62431 601 aa10.76□□□□□ -0.69
Syne1-201ENSMUST00000041639 Epn1Q80VP1 575 aa10.76□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ttll7A4Q9F0 912 aa10.76□□□□□ -0.69
Syne1-201ENSMUST00000041639 TxkP42682 527 aa10.76□□□□□ -0.69
Syne1-201ENSMUST00000041639 Mettl14Q3UIK4 456 aa10.76□□□□□ -0.69
Syne1-201ENSMUST00000041639 Sik1Q60670 779 aa10.76□□□□□ -0.69
Syne1-201ENSMUST00000041639 Krt87Q6IMF0 495 aa10.76□□□□□ -0.69
Syne1-201ENSMUST00000041639 HscbQ8K3A0 234 aa10.76□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gdap1l1Q8VE33 370 aa10.76□□□□□ -0.69
Syne1-201ENSMUST00000041639 Psrc1Q9D0P7 329 aa10.76□□□□□ -0.69
Syne1-201ENSMUST00000041639 FliiQ9JJ28 1271 aa10.76□□□□□ -0.69
Syne1-201ENSMUST00000041639 Tmod4Q9JLH8 345 aa10.76□□□□□ -0.69
Syne1-201ENSMUST00000041639 Nfe2l3Q9WTM4 660 aa10.76□□□□□ -0.69
Syne1-201ENSMUST00000041639 Efcab6Q6P1E8 1516 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ano3A2AHL1 981 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Pde8bE9Q4S1 865 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gm3415J3QMS8 315 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Atf2P16951 487 aaKnown RBP10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Tmed1Q3V009 227 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ddx39aQ8VDW0 427 aaKnown RBP10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 YarsQ91WQ3 528 aaKnown RBP10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Xpo5Q924C1 1204 aaKnown RBP10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gm3404Q9D506 307 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Sdr42e1Q9D665 394 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Krt24A1L317 512 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Axin2O88566 840 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Casp2P29594 452 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Znf219Q6IQX8 726 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Fbxo11Q7TPD1 930 aaKnown RBP10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Rapgef5Q8C0Q9 814 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Lrrc41Q8K1C9 807 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Nek9Q8K1R7 984 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 4930449I24RikQ9D5E3 319 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Kiaa1107Q80TK0 1369 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Adgrl1Q80TR1 1466 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Plxnc1Q9QZC2 1574 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Rsbn1lD3Z0K6 821 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gm1661E9Q963 441 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Kcnk16G5E845 292 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 P4hbP09103 509 aaKnown RBP10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Lmnb2P21619 596 aaKnown RBP10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Zscan2Q07230 614 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Kat14Q8CID0 779 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ccdc85cE9Q6B2 420 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Fam178bQ24JP3 464 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 MpndQ3TV65 487 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 VmacQ8BP01 174 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Cep57Q8CEE0 500 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Lmtk2Q3TYD6 1471 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Usp42B2RQC2 1324 aaKnown RBP10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 A0A1W2P6Q8 802 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gm9048A0A1W2P7H4 802 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 A0A1W2P7Z8 802 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gm9046A0A1W2P855 802 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Dcaf5Q80T85 946 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 HmcesQ8R1M0 353 aaKnown RBP10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Pstpip2Q99M15 334 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Pus3Q9JI38 481 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Tmem191cQ9JJB1 302 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gcc2Q8CHG3 1679 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Wdr17E9Q271 1322 aa10.75□□□□□ -0.69
Syne1-201ENSMUST00000041639 Lcmt1A0A0U1RNF2 332 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gm9992B2RWK3 458 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gm4340L7N2C4 268 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Atf5O70191 283 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Hspa2P17156 633 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Tsta3P23591 321 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gpr182P43142 395 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Il15P48346 162 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Myo1fP70248 1099 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Rnf207Q3V3A7 635 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Krt12Q64291 487 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Q66JV7 365 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Unc93aQ710D3 458 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Efcab14Q8BGQ6 484 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ifi35Q9D8C4 286 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gdf11Q9Z1W4 405 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Peg3Q3URU2 1571 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Prdm11A2AGX3 565 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Sec24cG3X972 1096 aaKnown RBP10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Calb1P12658 261 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 G3bp2P97379 482 aaKnown RBP10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ddx31Q6NZQ2 687 aaKnown RBP10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 IarsQ8BU30 1262 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Tor1aip1Q921T2 595 aaKnown RBP10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Taf7lQ9D3R9 471 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Stx12Q9ER00 274 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 IdeQ9JHR7 1019 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 FancaQ9JL70 1439 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gbp9Q8BTS3 619 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gbp5Q8CFB4 590 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ushbp1Q8R370 680 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Lrrc8cQ8R502 803 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Trim66Q924W6 1242 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Hdac6Q9Z2V5 1149 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ccdc24E9PUW8 296 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Xbp1O35426 267 aa10.74□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms