RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Slc51aQ8R000 340 aa12.71□□□□□ -0.37
Vps54-201ENSMUST00000006221 Tmem47Q9JJG6 181 aa12.71□□□□□ -0.37
Vps54-201ENSMUST00000006221 ByslO54825 436 aaKnown RBP12.71□□□□□ -0.37
Vps54-201ENSMUST00000006221 Mtss1lQ6P9S0 715 aa12.71□□□□□ -0.37
Vps54-201ENSMUST00000006221 Lrrn2Q6PHP6 730 aa12.71□□□□□ -0.37
Vps54-201ENSMUST00000006221 Exoc1Q8R3S6 894 aa12.71□□□□□ -0.37
Vps54-201ENSMUST00000006221 Clip2Q9Z0H8 1047 aa12.71□□□□□ -0.37
Vps54-201ENSMUST00000006221 Psmd10Q9Z2X2 231 aa12.71□□□□□ -0.37
Vps54-201ENSMUST00000006221 Gm7347D3YYI9 267 aa12.71□□□□□ -0.37
Vps54-201ENSMUST00000006221 Speer4aF8VPX6 267 aa12.71□□□□□ -0.37
Vps54-201ENSMUST00000006221 Kif3cO35066 796 aa12.71□□□□□ -0.37
Vps54-201ENSMUST00000006221 Il15P48346 162 aa12.71□□□□□ -0.37
Vps54-201ENSMUST00000006221 NfixP70257 488 aa12.71□□□□□ -0.37
Vps54-201ENSMUST00000006221 Antxr2Q6DFX2 487 aa12.71□□□□□ -0.37
Vps54-201ENSMUST00000006221 Atp1a1Q8VDN2 1023 aaKnown RBP12.71□□□□□ -0.37
Vps54-201ENSMUST00000006221 AdarQ99MU3 1178 aaKnown RBP12.71□□□□□ -0.37
Vps54-201ENSMUST00000006221 Gm11983V9GXS8 105 aa12.71□□□□□ -0.37
Vps54-201ENSMUST00000006221 Rbbp6P97868 1790 aaKnown RBP12.71□□□□□ -0.38
Vps54-201ENSMUST00000006221 Zfp853A0A1D5RM95 733 aa12.71□□□□□ -0.38
Vps54-201ENSMUST00000006221 Etnk2A7MCT6 385 aa12.71□□□□□ -0.38
Vps54-201ENSMUST00000006221 Otud7bB2RUR8 840 aa12.71□□□□□ -0.38
Vps54-201ENSMUST00000006221 Gm3893E9Q1I1 302 aa12.71□□□□□ -0.38
Vps54-201ENSMUST00000006221 Nr1i2O54915 431 aa12.71□□□□□ -0.38
Vps54-201ENSMUST00000006221 Lrriq3Q14DL3 633 aa12.71□□□□□ -0.38
Vps54-201ENSMUST00000006221 ItgadQ3V0T4 1168 aa12.71□□□□□ -0.38
Vps54-201ENSMUST00000006221 Islr2Q5RKR3 745 aa12.71□□□□□ -0.38
Vps54-201ENSMUST00000006221 Sema4bQ62179 823 aa12.71□□□□□ -0.38
Vps54-201ENSMUST00000006221 Ccdc73Q8CDM4 1066 aa12.71□□□□□ -0.38
Vps54-201ENSMUST00000006221 Znf280dQ68FE8 974 aa12.7□□□□□ -0.38
Vps54-201ENSMUST00000006221 Sh2b1Q91ZM2 756 aa12.7□□□□□ -0.38
Vps54-201ENSMUST00000006221 Gm7356A0A087WSA6 508 aa12.7□□□□□ -0.38
Vps54-201ENSMUST00000006221 ErmardE9Q048 622 aa12.7□□□□□ -0.38
Vps54-201ENSMUST00000006221 Prl2c2P04095 224 aa12.7□□□□□ -0.38
Vps54-201ENSMUST00000006221 Ccna1Q61456 421 aa12.7□□□□□ -0.38
Vps54-201ENSMUST00000006221 Fxr1Q61584 677 aaKnown RBP12.7□□□□□ -0.38
Vps54-201ENSMUST00000006221 HrQ61645 1182 aa12.7□□□□□ -0.38
Vps54-201ENSMUST00000006221 Trim9Q8C7M3 817 aa12.7□□□□□ -0.38
Vps54-201ENSMUST00000006221 Snrnp35Q9D384 244 aa12.7□□□□□ -0.38
Vps54-201ENSMUST00000006221 SarsP26638 512 aaKnown RBP12.7□□□□□ -0.38
Vps54-201ENSMUST00000006221 LRWD1Q8BUI3 648 aaKnown RBP12.7□□□□□ -0.38
Vps54-201ENSMUST00000006221 Pm20d1Q8C165 503 aa12.7□□□□□ -0.38
Vps54-201ENSMUST00000006221 Golga5Q9QYE6 729 aa12.7□□□□□ -0.38
Vps54-201ENSMUST00000006221 Knop1Q9Z2Q2 478 aaKnown RBP12.7□□□□□ -0.38
Vps54-201ENSMUST00000006221 Myh8P13542 1937 aa12.7□□□□□ -0.38
Vps54-201ENSMUST00000006221 Mboat4P0C7A3 435 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Top1Q04750 767 aaKnown RBP12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Krt222Q8CCX5 294 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Arhgef6Q8K4I3 771 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Cabp7Q91ZM8 215 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Tfap4Q9JIZ5 338 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Mtmr9Q9Z2D0 545 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Pabpc1lA2A5N3 607 aaKnown RBP12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Gm10378F6XQQ1 160 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Alppl2P24823 529 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Gfpt1P47856 697 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Capza3P70190 299 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Kcnb1Q03717 857 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Eif3j1Q3UGC7 261 aaKnown RBP12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Cep131Q62036 1060 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Eif3j2Q66JS6 263 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Asic1Q6NXK8 526 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Kdm1aQ6ZQ88 853 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Nop9Q8BMC4 636 aaKnown RBP12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 CutaQ9CQ89 177 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 March8Q9DBD2 286 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Psmd14O35593 310 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Cdr2P97817 455 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Znf667Q2TL60 609 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Esyt2Q3TZZ7 845 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Ccdc51Q3URS9 406 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Fhod1Q6P9Q4 1197 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Kif2bQ8C0N1 668 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Fbxo18Q8K2I9 1042 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Tor1aip1Q921T2 595 aaKnown RBP12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Sel1lQ9Z2G6 790 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Slc44a4Q91VA1 707 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Sar1bQ9CQC9 198 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 ToporslQ9D2F8 683 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Hsd3b7Q9EQC1 369 aa12.69□□□□□ -0.38
Vps54-201ENSMUST00000006221 Ifnar1P33896 590 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Tlr8P58682 1032 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Nol4P60954 483 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Tmem35bQ3U0Y2 150 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Gja3Q64448 417 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Jade2Q6ZQF7 829 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Leng8Q8CBY3 785 aaKnown RBP12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Pcdh11xF6ZNL5 1338 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Man1a2P39098 641 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Nsrp1Q5NCR9 542 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Dpf1Q9QX66 387 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Jag1Q9QXX0 1218 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 A430078G23RikE9Q7Y4 484 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 PurbO35295 324 aaKnown RBP12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Tbc1d2bQ3U0J8 965 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Lrrc55Q3UY51 311 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 PRAG1Q571I4 1179 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Tsr1Q5SWD9 803 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Cfap100Q80VN0 613 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Bpifb6Q8BU51 449 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 OplahQ8K010 1288 aa12.68□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms