RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Mrpl12Q9DB15 201 aaKnown RBP14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Gucy1a3Q9ERL9 691 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 AW822073A0A0N4SUK1 652 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Ap1b1O35643 943 aaKnown RBP14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Zfp42P22227 288 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Polr2fP61219 127 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 PcQ05920 1178 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Kif5bQ61768 963 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Krt77Q6IFZ6 572 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Bola2Q8BGS2 86 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Gpcpd1Q8C0L9 675 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 4930449I24RikQ9D5E3 319 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Pnpla7A2AJ88 1352 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Krt8P11679 490 aaKnown RBP14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Trappc10Q3TLI0 1259 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Arhgef16Q3U5C8 713 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Tmem232Q5K6N0 675 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Ctnna3Q65CL1 895 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Ushbp1Q8R370 680 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 4930407I10RikD3Z5T8 1512 aa13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Rnf207Q3V3A7 635 aa13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Acbd5Q5XG73 508 aa13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Rbm15bQ6PHZ5 887 aaKnown RBP13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Fam133bQ9CVI2 245 aaKnown RBP13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Rwdd2aQ9D9S3 292 aa13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 AK157302I3ITR1 129 aa13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Clcn6O35454 870 aa13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Nkx2-3P97334 362 aa13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Ctnna2Q61301 953 aa13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Tbc1d30Q69ZT9 766 aa13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Dynll2Q9D0M5 89 aa13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Sept12Q9D451 317 aa13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Isca1Q9D924 129 aa13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Gm2030D3Z7C4 212 aa13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Nr1d1Q3UV55 615 aa13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Yars2Q8BYL4 472 aaKnown RBP13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Ehd4Q9EQP2 541 aa13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Sept3Q9Z1S5 350 aa13.99□□□□□ -0.17
Msh6-201ENSMUST00000005503 Prpf38aQ4FK66 312 aaKnown RBP13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Hdac4Q6NZM9 1076 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Gimap5Q8BWF2 308 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Spice1Q8C804 860 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Tbx22Q8K402 517 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Prpf3Q922U1 683 aaKnown RBP13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 AacsQ9D2R0 672 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Kank3Q9Z1P7 791 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Zfp408H7BX78 710 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Nr5a1P33242 462 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Rps8P62242 208 aaKnown RBP13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Eya3P97480 510 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Gjb4Q02738 266 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Ncf1Q09014 390 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Edrf1Q6GQV7 1239 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Rbm26Q6NZN0 1012 aaKnown RBP13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 SpopQ6ZWS8 374 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Parp14Q2EMV9 1817 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Dip2cE9PWR4 1557 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Hecw2Q6I6G8 1578 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Gucy1a2F8VQK3 730 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Apol10bG3X9K7 334 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Ctnnd1P30999 938 aaKnown RBP13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Prl2c1Q5SVL9 228 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 GypcQ78HU7 95 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Rint1Q8BZ36 792 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Ccdc28aQ8CEI3 192 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Xrn1P97789 1719 aaKnown RBP13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Tubgcp6G5E8P0 1769 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Prr5lA2AVJ5 370 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Kif23E9Q5G3 953 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Psmc2P46471 433 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Rpl13P47963 211 aaKnown RBP13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Efcab14Q8BGQ6 484 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 PdhbQ9D051 359 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Tfap4Q9JIZ5 338 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Myl7Q9QVP4 175 aa13.98□□□□□ -0.17
Msh6-201ENSMUST00000005503 Cdh15P33146 784 aa13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 LtbrP50284 415 aa13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Ddx3yQ62095 658 aaKnown RBP13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Haus6Q6NV99 933 aaKnown RBP13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Tmem63cQ8CBX0 802 aa13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Ppil4Q9CXG3 492 aaKnown RBP13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Pex11aQ9Z211 246 aa13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Nfatc2ipO09130 412 aa13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 LdhaP06151 332 aaKnown RBP13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Ttll4Q80UG8 1193 aa13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Cxcl11Q9JHH5 100 aa13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Cacna2d3Q9Z1L5 1091 aa13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Myo5cE9Q1F5 1742 aa13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Ccdc152E9PX14 254 aa13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Gad1P48318 593 aa13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Meis3P97368 378 aa13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Nek5Q7TSC3 627 aa13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Rab44Q8CB87 725 aa13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Pcdhgc5Q91XW9 944 aa13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Klc4Q9DBS5 619 aa13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Sgpp1Q9JI99 430 aa13.97□□□□□ -0.17
Msh6-201ENSMUST00000005503 Myom1Q62234 1667 aaKnown RBP13.96□□□□□ -0.17
Msh6-201ENSMUST00000005503 DohhA0A1Y7VJ29 135 aa13.96□□□□□ -0.17
Msh6-201ENSMUST00000005503 Cyp2c23E9Q5K4 494 aa13.96□□□□□ -0.17
Msh6-201ENSMUST00000005503 Serpinb1cQ5SV42 375 aa13.96□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 99.4 ms