RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A TRM12Q04235 462 aa8.03□□□□□ -1.12
TGA1tA(UGC)A VTA1Q06263 330 aa8.03□□□□□ -1.12
TGA1tA(UGC)A MRH1Q12117 320 aaPredicted RBP8.03□□□□□ -1.12
TGA1tA(UGC)A ICT1Q12385 394 aa8.03□□□□□ -1.12
TGA1tA(UGC)A RPB2P08518 1224 aaKnown RBP8.02□□□□□ -1.13
TGA1tA(UGC)A RPO26P20435 155 aa8.02□□□□□ -1.13
TGA1tA(UGC)A RRP1P35178 278 aaPredicted RBP8.02□□□□□ -1.13
TGA1tA(UGC)A HAT2P39984 401 aa8.02□□□□□ -1.13
TGA1tA(UGC)A HST2P53686 357 aa8.02□□□□□ -1.13
TGA1tA(UGC)A VPS60Q03390 229 aa8.02□□□□□ -1.13
TGA1tA(UGC)A YDR061WQ12298 539 aa8.02□□□□□ -1.13
TGA1tA(UGC)A TRA1P38811 3744 aa8.02□□□□□ -1.13
TGA1tA(UGC)A YAR066WP0CX18 203 aa8.01□□□□□ -1.13
TGA1tA(UGC)A YHR214WP0CX19 203 aa8.01□□□□□ -1.13
TGA1tA(UGC)A ADH4P10127 382 aa8.01□□□□□ -1.13
TGA1tA(UGC)A CWP1P28319 239 aa8.01□□□□□ -1.13
TGA1tA(UGC)A SFP1P32432 683 aa8.01□□□□□ -1.13
TGA1tA(UGC)A RIM1P32445 135 aaKnown RBP8.01□□□□□ -1.13
TGA1tA(UGC)A SOL2P37262 315 aa8.01□□□□□ -1.13
TGA1tA(UGC)A OLA1P38219 394 aaKnown RBP8.01□□□□□ -1.13
TGA1tA(UGC)A CEM1P39525 442 aa8.01□□□□□ -1.13
TGA1tA(UGC)A LSM5P40089 93 aaKnown RBP8.01□□□□□ -1.13
TGA1tA(UGC)A MIC19P43594 170 aa8.01□□□□□ -1.13
TGA1tA(UGC)A TY4A-JP47023 414 aa8.01□□□□□ -1.13
TGA1tA(UGC)A RHO3Q00245 231 aaKnown RBP8.01□□□□□ -1.13
TGA1tA(UGC)A SLP1Q12232 587 aa8.01□□□□□ -1.13
TGA1tA(UGC)A YMR030W-AQ3E760 96 aa8.01□□□□□ -1.13
TGA1tA(UGC)A SEM1O94742 89 aa8□□□□□ -1.13
TGA1tA(UGC)A RIP1P08067 215 aa8□□□□□ -1.13
TGA1tA(UGC)A RSC6P25632 483 aa8□□□□□ -1.13
TGA1tA(UGC)A MSH1P25846 959 aa8□□□□□ -1.13
TGA1tA(UGC)A YPT52P36018 234 aaKnown RBP8□□□□□ -1.13
TGA1tA(UGC)A RPF2P36160 344 aaKnown RBP8□□□□□ -1.13
TGA1tA(UGC)A ETR1P38071 380 aa8□□□□□ -1.13
TGA1tA(UGC)A ARA1P38115 344 aa8□□□□□ -1.13
TGA1tA(UGC)A MUP3P38734 546 aa8□□□□□ -1.13
TGA1tA(UGC)A MPT5P39016 859 aaKnown RBP RIP-Chip data8□□□□□ -1.13not detected
TGA1tA(UGC)A YER158CP40095 573 aa8□□□□□ -1.13
TGA1tA(UGC)A SMX2P40204 77 aaKnown RBP8□□□□□ -1.13
TGA1tA(UGC)A YFR020WP43600 232 aa8□□□□□ -1.13
TGA1tA(UGC)A LSC1P53598 329 aaKnown RBP8□□□□□ -1.13
TGA1tA(UGC)A BNI4P53858 892 aa8□□□□□ -1.13
TGA1tA(UGC)A EGD1Q02642 157 aaKnown RBP8□□□□□ -1.13
TGA1tA(UGC)A CTK1Q03957 528 aaKnown RBP8□□□□□ -1.13
TGA1tA(UGC)A BUD22Q04347 519 aaKnown RBP8□□□□□ -1.13
TGA1tA(UGC)A STP3Q05937 343 aa8□□□□□ -1.13
TGA1tA(UGC)A GRS2Q06817 618 aa8□□□□□ -1.13
TGA1tA(UGC)A SKM1Q12469 655 aa8□□□□□ -1.13
TGA1tA(UGC)A HSH49Q99181 213 aaPredicted RBP8□□□□□ -1.13
TGA1tA(UGC)A HRP1Q99383 534 aaKnown RBP8□□□□□ -1.13
TGA1tA(UGC)A TEC1P18412 486 aa7.99□□□□□ -1.13
TGA1tA(UGC)A AMD2P22580 549 aa7.99□□□□□ -1.13
TGA1tA(UGC)A SEC14P24280 304 aaKnown RBP7.99□□□□□ -1.13
TGA1tA(UGC)A SPT16P32558 1035 aaKnown RBP7.99□□□□□ -1.13
TGA1tA(UGC)A YME1P32795 747 aa7.99□□□□□ -1.13
TGA1tA(UGC)A CDC13P32797 924 aaKnown RBP7.99□□□□□ -1.13
TGA1tA(UGC)A CYM1P32898 989 aa7.99□□□□□ -1.13
TGA1tA(UGC)A RPC37P36121 282 aa7.99□□□□□ -1.13
TGA1tA(UGC)A SPP381P38282 291 aaPredicted RBP7.99□□□□□ -1.13
TGA1tA(UGC)A DMA1P38823 416 aa7.99□□□□□ -1.13
TGA1tA(UGC)A LRO1P40345 661 aa7.99□□□□□ -1.13
TGA1tA(UGC)A SEC28P40509 296 aaKnown RBP7.99□□□□□ -1.13
TGA1tA(UGC)A CEP3P40969 608 aa7.99□□□□□ -1.13
TGA1tA(UGC)A TIS11P47977 285 aa7.99□□□□□ -1.13
TGA1tA(UGC)A HST3P53687 447 aa7.99□□□□□ -1.13
TGA1tA(UGC)A KTR5P53966 522 aaPredicted RBP7.99□□□□□ -1.13
TGA1tA(UGC)A AAT1Q01802 451 aa7.99□□□□□ -1.13
TGA1tA(UGC)A SSL1Q04673 461 aaPredicted RBP7.99□□□□□ -1.13
TGA1tA(UGC)A RSC3Q06639 885 aa7.99□□□□□ -1.13
TGA1tA(UGC)A CMR1Q12510 522 aaKnown RBP7.99□□□□□ -1.13
TGA1tA(UGC)A PRP8P33334 2413 aaKnown RBP7.98□□□□□ -1.13
TGA1tA(UGC)A SEC53P07283 254 aaKnown RBP7.98□□□□□ -1.13
TGA1tA(UGC)A ILV2P07342 687 aaKnown RBP7.98□□□□□ -1.13
TGA1tA(UGC)A GCY1P14065 312 aaKnown RBP RIP-Chip data7.98□□□□□ -1.13not detected
TGA1tA(UGC)A RED1P14291 827 aa7.98□□□□□ -1.13
TGA1tA(UGC)A MET8P15807 274 aa7.98□□□□□ -1.13
TGA1tA(UGC)A HRR25P29295 494 aaKnown RBP7.98□□□□□ -1.13
TGA1tA(UGC)A NRP1P32770 719 aaKnown RBP RIP-Chip data7.98□□□□□ -1.13not detected
TGA1tA(UGC)A WBP1P33767 430 aaKnown RBP7.98□□□□□ -1.13
TGA1tA(UGC)A MEP1P40260 492 aa7.98□□□□□ -1.13
TGA1tA(UGC)A STB2P46679 850 aa7.98□□□□□ -1.13
TGA1tA(UGC)A BOL2P53082 120 aa7.98□□□□□ -1.13
TGA1tA(UGC)A RTS3P53289 263 aa7.98□□□□□ -1.13
TGA1tA(UGC)A UTP13Q05946 817 aaKnown RBP7.98□□□□□ -1.13
TGA1tA(UGC)A TDA5Q06417 326 aaKnown RBP7.98□□□□□ -1.13
TGA1tA(UGC)A YET3Q07451 203 aa7.98□□□□□ -1.13
TGA1tA(UGC)A FRA1Q07825 749 aa7.98□□□□□ -1.13
TGA1tA(UGC)A PRP16P15938 1071 aaPredicted RBP7.97□□□□□ -1.13
TGA1tA(UGC)A CLN2P20438 545 aa7.97□□□□□ -1.13
TGA1tA(UGC)A DAL82P21705 255 aa7.97□□□□□ -1.13
TGA1tA(UGC)A TRX2P22803 104 aaKnown RBP7.97□□□□□ -1.13
TGA1tA(UGC)A AAD3P25612 363 aa7.97□□□□□ -1.13
TGA1tA(UGC)A ATP11P32453 318 aa7.97□□□□□ -1.13
TGA1tA(UGC)A SKN1P33336 771 aa7.97□□□□□ -1.13
TGA1tA(UGC)A SET3P36124 751 aa7.97□□□□□ -1.13
TGA1tA(UGC)A VRP1P37370 817 aa7.97□□□□□ -1.13
TGA1tA(UGC)A GIM4P40005 111 aaKnown RBP7.97□□□□□ -1.13
TGA1tA(UGC)A UTP18P40362 594 aaPredicted RBP7.97□□□□□ -1.13
TGA1tA(UGC)A PFA3P42836 336 aa7.97□□□□□ -1.13
TGA1tA(UGC)A PRP31P49704 494 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms