RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W TPA1P40032 644 aaKnown RBP4.94□□□□□ -1.62
VPS28YPL065W PKP1P40530 394 aa4.94□□□□□ -1.62
VPS28YPL065W MRX6P48564 524 aa4.94□□□□□ -1.62
VPS28YPL065W ARE2P53629 642 aaKnown RBP4.94□□□□□ -1.62
VPS28YPL065W YNL144CP53907 740 aa4.94□□□□□ -1.62
VPS28YPL065W YML037CQ03703 340 aa4.94□□□□□ -1.62
VPS28YPL065W ARP9Q05123 467 aa4.94□□□□□ -1.62
VPS28YPL065W NDD1Q08887 554 aa4.94□□□□□ -1.62
VPS28YPL065W INP53Q12271 1107 aa4.94□□□□□ -1.62
VPS28YPL065W NOP58Q12499 511 aaKnown RBP4.94□□□□□ -1.62
VPS28YPL065W INH1P01097 85 aa4.93□□□□□ -1.62
VPS28YPL065W RAP1P11938 827 aa4.93□□□□□ -1.62
VPS28YPL065W VMA16P23968 213 aa4.93□□□□□ -1.62
VPS28YPL065W STE50P25344 346 aa4.93□□□□□ -1.62
VPS28YPL065W CMK1P27466 446 aaKnown RBP4.93□□□□□ -1.62
VPS28YPL065W DIA4P38705 446 aaPredicted RBP4.93□□□□□ -1.62
VPS28YPL065W VPS41P38959 992 aa4.93□□□□□ -1.62
VPS28YPL065W FLC2P39719 783 aa4.93□□□□□ -1.62
VPS28YPL065W YPT11P48559 417 aa4.93□□□□□ -1.62
VPS28YPL065W NNF2P53253 936 aa4.93□□□□□ -1.62
VPS28YPL065W RBG2P53295 368 aaKnown RBP4.93□□□□□ -1.62
VPS28YPL065W YTP1P53584 459 aa4.93□□□□□ -1.62
VPS28YPL065W EAF7P53911 425 aaKnown RBP4.93□□□□□ -1.62
VPS28YPL065W MFB1Q04922 465 aa4.93□□□□□ -1.62
VPS28YPL065W ECM22Q05958 814 aaPredicted RBP4.93□□□□□ -1.62
VPS28YPL065W YPL272CQ08984 517 aa4.93□□□□□ -1.62
VPS28YPL065W NMD4Q12129 218 aa4.93□□□□□ -1.62
VPS28YPL065W ARD1P07347 238 aaPredicted RBP4.92□□□□□ -1.62
VPS28YPL065W SNU114P36048 1008 aaKnown RBP4.92□□□□□ -1.62
VPS28YPL065W NOP4P37838 685 aaKnown RBP4.92□□□□□ -1.62
VPS28YPL065W AGP2P38090 596 aa4.92□□□□□ -1.62
VPS28YPL065W RTT107P38850 1070 aa4.92□□□□□ -1.62
VPS28YPL065W NPR2P39923 615 aa4.92□□□□□ -1.62
VPS28YPL065W ASI1P54074 624 aa4.92□□□□□ -1.62
VPS28YPL065W TSR2Q06672 205 aaKnown RBP4.92□□□□□ -1.62
VPS28YPL065W MLH2Q07980 695 aa4.92□□□□□ -1.62
VPS28YPL065W YCR043CP25361 127 aa4.91□□□□□ -1.62
VPS28YPL065W PEP3P27801 918 aa4.91□□□□□ -1.62
VPS28YPL065W SAC1P32368 623 aaKnown RBP4.91□□□□□ -1.62
VPS28YPL065W ARC40P38328 384 aaKnown RBP4.91□□□□□ -1.62
VPS28YPL065W UIP3P39547 235 aa4.91□□□□□ -1.62
VPS28YPL065W TES1P41903 349 aaKnown RBP4.91□□□□□ -1.62
VPS28YPL065W DIA3P52290 468 aa4.91□□□□□ -1.62
VPS28YPL065W STR3P53101 465 aaKnown RBP4.91□□□□□ -1.62
VPS28YPL065W VPS75P53853 264 aa4.91□□□□□ -1.62
VPS28YPL065W MAK10Q02197 733 aa4.91□□□□□ -1.62
VPS28YPL065W BUD22Q04347 519 aaKnown RBP4.91□□□□□ -1.62
VPS28YPL065W CTI6Q08923 506 aa4.91□□□□□ -1.62
VPS28YPL065W RTP1Q12751 981 aa4.91□□□□□ -1.62
VPS28YPL065W MRP7P12687 371 aa4.9□□□□□ -1.63
VPS28YPL065W KGD1P20967 1014 aaKnown RBP4.9□□□□□ -1.63
VPS28YPL065W LCB1P25045 558 aaKnown RBP4.9□□□□□ -1.63
VPS28YPL065W AFG3P39925 761 aa4.9□□□□□ -1.63
VPS28YPL065W RCN2Q12044 265 aa4.9□□□□□ -1.63
VPS28YPL065W GCN4P03069 281 aa4.89□□□□□ -1.63
VPS28YPL065W KRS1P15180 591 aaKnown RBP4.89□□□□□ -1.63
VPS28YPL065W ADH7P25377 361 aa4.89□□□□□ -1.63
VPS28YPL065W YIH1P25637 258 aa4.89□□□□□ -1.63
VPS28YPL065W ELO1P39540 310 aa4.89□□□□□ -1.63
VPS28YPL065W RGI2P40188 164 aa4.89□□□□□ -1.63
VPS28YPL065W UBP8P50102 471 aa4.89□□□□□ -1.63
VPS28YPL065W ZDS2P54786 942 aa4.89□□□□□ -1.63
VPS28YPL065W YMR178WQ03219 274 aaKnown RBP4.89□□□□□ -1.63
VPS28YPL065W SWF1Q04629 336 aa4.89□□□□□ -1.63
VPS28YPL065W YLR281CQ05863 155 aa4.89□□□□□ -1.63
VPS28YPL065W GSH2Q08220 491 aa4.89□□□□□ -1.63
VPS28YPL065W ARG3P05150 338 aa4.88□□□□□ -1.63
VPS28YPL065W CDC31P06704 161 aaKnown RBP4.88□□□□□ -1.63
VPS28YPL065W CBS1P14066 229 aa4.88□□□□□ -1.63
VPS28YPL065W CLB2P24869 491 aa4.88□□□□□ -1.63
VPS28YPL065W YKL050CP35736 922 aa4.88□□□□□ -1.63
VPS28YPL065W SRO77P38163 1010 aa4.88□□□□□ -1.63
VPS28YPL065W ANS1P38832 159 aa4.88□□□□□ -1.63
VPS28YPL065W MET30P39014 640 aa4.88□□□□□ -1.63
VPS28YPL065W CCT6P39079 546 aa4.88□□□□□ -1.63
VPS28YPL065W YIL169CP40442 995 aa4.88□□□□□ -1.63
VPS28YPL065W SGN1P40561 250 aaKnown RBP RIP-Chip data4.88□□□□□ -1.63not detected
VPS28YPL065W SMC3P47037 1230 aa4.88□□□□□ -1.63
VPS28YPL065W RPT6Q01939 405 aaKnown RBP4.88□□□□□ -1.63
VPS28YPL065W DPB4Q04603 196 aaKnown RBP4.88□□□□□ -1.63
VPS28YPL065W YMR034CQ05131 434 aaPredicted RBP4.88□□□□□ -1.63
VPS28YPL065W LUC7Q07508 261 aaPredicted RBP4.88□□□□□ -1.63
VPS28YPL065W RTT109Q07794 436 aa4.88□□□□□ -1.63
VPS28YPL065W YEH1Q07804 573 aa4.88□□□□□ -1.63
VPS28YPL065W APL4Q12028 832 aa4.88□□□□□ -1.63
VPS28YPL065W TAH18Q12181 623 aa4.88□□□□□ -1.63
VPS28YPL065W EST1P17214 699 aaPredicted RBP4.87□□□□□ -1.63
VPS28YPL065W SPE2P21182 396 aa4.87□□□□□ -1.63
VPS28YPL065W SYN8P31377 255 aa4.87□□□□□ -1.63
VPS28YPL065W RFC1P38630 861 aaKnown RBP4.87□□□□□ -1.63
VPS28YPL065W GIS2P53849 153 aaKnown RBP RIP-Chip data4.87□□□□□ -1.63not detected
VPS28YPL065W RPC11Q04307 110 aaPredicted RBP4.87□□□□□ -1.63
VPS28YPL065W GRC3Q07845 632 aa4.87□□□□□ -1.63
VPS28YPL065W YLR112WQ12130 139 aa4.87□□□□□ -1.63
VPS28YPL065W LEU9Q12166 604 aaKnown RBP4.87□□□□□ -1.63
VPS28YPL065W YPT6Q99260 215 aa4.87□□□□□ -1.63
VPS28YPL065W MF(ALPHA)1P01149 165 aa4.86□□□□□ -1.63
VPS28YPL065W PGS1P25578 521 aa4.86□□□□□ -1.63
VPS28YPL065W UBP11P36026 717 aa4.86□□□□□ -1.63
VPS28YPL065W REG2P38232 338 aa4.86□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms