RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W KSP1P38691 1029 aaKnown RBP2.4□□□□□ -2.03
VPS16YPL045W FUN12P39730 1002 aaKnown RBP2.4□□□□□ -2.03
VPS16YPL045W EFM4P40516 257 aa2.4□□□□□ -2.03
VPS16YPL045W PET130P47065 347 aa2.4□□□□□ -2.03
VPS16YPL045W VID30P53076 958 aa2.4□□□□□ -2.03
VPS16YPL045W CUL3P53202 744 aa2.4□□□□□ -2.03
VPS16YPL045W SOV1Q04748 898 aa2.4□□□□□ -2.03
VPS16YPL045W RSF1Q05043 376 aa2.4□□□□□ -2.03
VPS16YPL045W TMA10Q06177 86 aa2.4□□□□□ -2.03
VPS16YPL045W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
VPS16YPL045W BAG7Q12128 409 aa2.4□□□□□ -2.03
VPS16YPL045W RKI1Q12189 258 aa2.4□□□□□ -2.03
VPS16YPL045W HSP42Q12329 375 aa2.4□□□□□ -2.03
VPS16YPL045W SKS1Q12505 502 aa2.4□□□□□ -2.03
VPS16YPL045W BNI1P41832 1953 aa2.4□□□□□ -2.03
VPS16YPL045W SNT2P53127 1403 aa2.4□□□□□ -2.03
VPS16YPL045W PDR15Q04182 1529 aaKnown RBP2.4□□□□□ -2.03
VPS16YPL045W YBT1P32386 1661 aa2.39□□□□□ -2.03
VPS16YPL045W VPS15P22219 1454 aa2.39□□□□□ -2.03
VPS16YPL045W STF1P01098 86 aa2.39□□□□□ -2.03
VPS16YPL045W PCT1P13259 424 aa2.39□□□□□ -2.03
VPS16YPL045W PDA1P16387 420 aaKnown RBP2.39□□□□□ -2.03
VPS16YPL045W STE4P18851 423 aa2.39□□□□□ -2.03
VPS16YPL045W KGD1P20967 1014 aaKnown RBP2.39□□□□□ -2.03
VPS16YPL045W RPN2P32565 945 aaKnown RBP2.39□□□□□ -2.03
VPS16YPL045W SIP1P32578 815 aa2.39□□□□□ -2.03
VPS16YPL045W TSA1P34760 196 aaKnown RBP2.39□□□□□ -2.03
VPS16YPL045W NTR2P36118 322 aaPredicted RBP2.39□□□□□ -2.03
VPS16YPL045W LAS1P36146 502 aaPredicted RBP2.39□□□□□ -2.03
VPS16YPL045W AAP1P37898 856 aaKnown RBP2.39□□□□□ -2.03
VPS16YPL045W RRF1P38771 230 aa2.39□□□□□ -2.03
VPS16YPL045W BUR6P40096 142 aa2.39□□□□□ -2.03
VPS16YPL045W IRC8P47046 822 aa2.39□□□□□ -2.03
VPS16YPL045W MDE1P47095 244 aa2.39□□□□□ -2.03
VPS16YPL045W RPS7BP48164 190 aaKnown RBP2.39□□□□□ -2.03
VPS16YPL045W HOS2P53096 452 aaPredicted RBP2.39□□□□□ -2.03
VPS16YPL045W DCP2P53550 970 aaKnown RBP2.39□□□□□ -2.03
VPS16YPL045W BOP3P53958 396 aa2.39□□□□□ -2.03
VPS16YPL045W SEC5P89102 971 aa2.39□□□□□ -2.03
VPS16YPL045W RSM28Q03430 361 aa2.39□□□□□ -2.03
VPS16YPL045W YDR109CQ04585 715 aa2.39□□□□□ -2.03
VPS16YPL045W RBS1Q05672 457 aaKnown RBP2.39□□□□□ -2.03
VPS16YPL045W FMP40Q08968 688 aaPredicted RBP2.39□□□□□ -2.03
VPS16YPL045W TGS1Q12052 315 aa2.39□□□□□ -2.03
VPS16YPL045W RLM1Q12224 676 aa2.39□□□□□ -2.03
VPS16YPL045W Q0010Q9ZZX9 128 aa2.39□□□□□ -2.03
VPS16YPL045W GEA2P39993 1459 aaKnown RBP2.39□□□□□ -2.03
VPS16YPL045W SNT1P25357 1226 aa2.39□□□□□ -2.03
VPS16YPL045W SSE2P32590 693 aaKnown RBP2.39□□□□□ -2.03
VPS16YPL045W LIP5P32875 414 aa2.39□□□□□ -2.03
VPS16YPL045W TIF3P34167 436 aaKnown RBP2.39□□□□□ -2.03
VPS16YPL045W LOT5P34234 306 aa2.39□□□□□ -2.03
VPS16YPL045W RPF2P36160 344 aaKnown RBP2.39□□□□□ -2.03
VPS16YPL045W AIM3P38266 947 aaKnown RBP2.39□□□□□ -2.03
VPS16YPL045W MAM1P40065 302 aa2.39□□□□□ -2.03
VPS16YPL045W CAK1P43568 368 aaPredicted RBP2.39□□□□□ -2.03
VPS16YPL045W UBX6P47049 396 aa2.39□□□□□ -2.03
VPS16YPL045W IMD4P50094 524 aaKnown RBP2.39□□□□□ -2.03
VPS16YPL045W MAK10Q02197 733 aa2.39□□□□□ -2.03
VPS16YPL045W HOT1Q03213 719 aa2.39□□□□□ -2.03
VPS16YPL045W TRS23Q03784 219 aa2.39□□□□□ -2.03
VPS16YPL045W MMR1Q06324 491 aa2.39□□□□□ -2.03
VPS16YPL045W REX3Q12090 404 aa2.39□□□□□ -2.03
VPS16YPL045W RPN5Q12250 445 aaKnown RBP2.39□□□□□ -2.03
VPS16YPL045W CTF3Q12748 733 aa2.39□□□□□ -2.03
VPS16YPL045W PDR12Q02785 1511 aa2.39□□□□□ -2.03
VPS16YPL045W DOP1Q03921 1698 aa2.39□□□□□ -2.03
VPS16YPL045W CHO2P05374 869 aaKnown RBP2.38□□□□□ -2.03
VPS16YPL045W GLK1P17709 500 aaKnown RBP2.38□□□□□ -2.03
VPS16YPL045W STE11P23561 717 aa2.38□□□□□ -2.03
VPS16YPL045W ERG4P25340 473 aa2.38□□□□□ -2.03
VPS16YPL045W TFB1P32776 642 aa2.38□□□□□ -2.03
VPS16YPL045W SEF1P34228 1148 aa2.38□□□□□ -2.03
VPS16YPL045W HEL1P36113 551 aa2.38□□□□□ -2.03
VPS16YPL045W MTG2P38860 518 aa2.38□□□□□ -2.03
VPS16YPL045W SEC31P38968 1273 aaKnown RBP2.38□□□□□ -2.03
VPS16YPL045W ALG5P40350 334 aa2.38□□□□□ -2.03
VPS16YPL045W HXT14P42833 540 aa2.38□□□□□ -2.03
VPS16YPL045W DLD2P46681 530 aaKnown RBP2.38□□□□□ -2.03
VPS16YPL045W INP52P50942 1183 aa2.38□□□□□ -2.03
VPS16YPL045W MCM6P53091 1017 aaKnown RBP2.38□□□□□ -2.03
VPS16YPL045W TOF1P53840 1238 aa2.38□□□□□ -2.03
VPS16YPL045W IPI3P53877 555 aa2.38□□□□□ -2.03
VPS16YPL045W ADE16P54113 591 aaKnown RBP2.38□□□□□ -2.03
VPS16YPL045W KAP120Q02932 1032 aa2.38□□□□□ -2.03
VPS16YPL045W PRP3Q03338 469 aaPredicted RBP2.38□□□□□ -2.03
VPS16YPL045W VTI1Q04338 217 aa2.38□□□□□ -2.03
VPS16YPL045W ARG7Q04728 441 aa2.38□□□□□ -2.03
VPS16YPL045W YML053CQ04978 212 aa2.38□□□□□ -2.03
VPS16YPL045W VTA1Q06263 330 aa2.38□□□□□ -2.03
VPS16YPL045W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
VPS16YPL045W GDB1Q06625 1536 aa2.38□□□□□ -2.03
VPS16YPL045W LAM4P38800 1345 aa2.38□□□□□ -2.03
VPS16YPL045W STH1P32597 1359 aa2.38□□□□□ -2.03
VPS16YPL045W MF(ALPHA)1P01149 165 aa2.38□□□□□ -2.03
VPS16YPL045W MRP13P12686 339 aa2.38□□□□□ -2.03
VPS16YPL045W RPL3P14126 387 aaKnown RBP2.38□□□□□ -2.03
VPS16YPL045W ADH7P25377 361 aa2.38□□□□□ -2.03
VPS16YPL045W BUD14P27637 709 aa2.38□□□□□ -2.03
VPS16YPL045W LAC1P28496 418 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms