RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W RCF1Q03713 159 aa3.34□□□□□ -1.87
SRL1YOR247W RAD34Q06665 692 aa3.34□□□□□ -1.87
SRL1YOR247W YPL272CQ08984 517 aa3.34□□□□□ -1.87
SRL1YOR247W ATG29Q12092 213 aa3.34□□□□□ -1.87
SRL1YOR247W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
SRL1YOR247W RDL1Q12305 139 aaKnown RBP3.34□□□□□ -1.87
SRL1YOR247W PET111P08468 800 aa3.33□□□□□ -1.88
SRL1YOR247W AQY1P0CD91 305 aa3.33□□□□□ -1.88
SRL1YOR247W CLC1P17891 233 aa3.33□□□□□ -1.88
SRL1YOR247W ILV6P25605 309 aaKnown RBP3.33□□□□□ -1.88
SRL1YOR247W CMC1P36064 111 aa3.33□□□□□ -1.88
SRL1YOR247W FTH1P38310 465 aa3.33□□□□□ -1.88
SRL1YOR247W CCT6P39079 546 aa3.33□□□□□ -1.88
SRL1YOR247W ELO1P39540 310 aa3.33□□□□□ -1.88
SRL1YOR247W YJL068CP40363 299 aa3.33□□□□□ -1.88
SRL1YOR247W SSU1P41930 458 aa3.33□□□□□ -1.88
SRL1YOR247W QRI1P43123 477 aaKnown RBP3.33□□□□□ -1.88
SRL1YOR247W YFR020WP43600 232 aa3.33□□□□□ -1.88
SRL1YOR247W ORC5P50874 479 aa3.33□□□□□ -1.88
SRL1YOR247W TWF1P53250 332 aa3.33□□□□□ -1.88
SRL1YOR247W OGG1P53397 376 aaPredicted RBP3.33□□□□□ -1.88
SRL1YOR247W VPS9P54787 451 aa3.33□□□□□ -1.88
SRL1YOR247W YMR178WQ03219 274 aaKnown RBP3.33□□□□□ -1.88
SRL1YOR247W PFA5Q03289 374 aa3.33□□□□□ -1.88
SRL1YOR247W FIN1Q03898 291 aa3.33□□□□□ -1.88
SRL1YOR247W DPB4Q04603 196 aaKnown RBP3.33□□□□□ -1.88
SRL1YOR247W CDC45Q08032 650 aa3.33□□□□□ -1.88
SRL1YOR247W HSP82P02829 709 aaKnown RBP3.32□□□□□ -1.88
SRL1YOR247W APN1P22936 367 aa3.32□□□□□ -1.88
SRL1YOR247W YCR006CP25350 157 aa3.32□□□□□ -1.88
SRL1YOR247W BOS1P25385 244 aa3.32□□□□□ -1.88
SRL1YOR247W IMG1P25626 169 aa3.32□□□□□ -1.88
SRL1YOR247W SYN8P31377 255 aa3.32□□□□□ -1.88
SRL1YOR247W SAC1P32368 623 aaKnown RBP3.32□□□□□ -1.88
SRL1YOR247W SWI3P32591 825 aa3.32□□□□□ -1.88
SRL1YOR247W MRE11P32829 692 aa3.32□□□□□ -1.88
SRL1YOR247W TCD2P36101 447 aaKnown RBP3.32□□□□□ -1.88
SRL1YOR247W MNN2P38069 597 aa3.32□□□□□ -1.88
SRL1YOR247W RFC1P38630 861 aaKnown RBP3.32□□□□□ -1.88
SRL1YOR247W MAF1P41910 395 aa3.32□□□□□ -1.88
SRL1YOR247W YPR003CP53394 754 aa3.32□□□□□ -1.88
SRL1YOR247W IPI3P53877 555 aa3.32□□□□□ -1.88
SRL1YOR247W RMT2Q03305 412 aa3.32□□□□□ -1.88
SRL1YOR247W RQC1Q05468 723 aaKnown RBP3.32□□□□□ -1.88
SRL1YOR247W IRC3Q06683 689 aa3.32□□□□□ -1.88
SRL1YOR247W ATG9Q12142 997 aa3.32□□□□□ -1.88
SRL1YOR247W SNU66Q12420 587 aaPredicted RBP3.32□□□□□ -1.88
SRL1YOR247W SEC39Q12745 709 aa3.32□□□□□ -1.88
SRL1YOR247W KRS1P15180 591 aaKnown RBP3.31□□□□□ -1.88
SRL1YOR247W ART10P18634 518 aaKnown RBP3.31□□□□□ -1.88
SRL1YOR247W MAK32P23060 363 aa3.31□□□□□ -1.88
SRL1YOR247W TKL1P23254 680 aaKnown RBP3.31□□□□□ -1.88
SRL1YOR247W PUP3P25451 205 aaKnown RBP3.31□□□□□ -1.88
SRL1YOR247W PAP1P29468 568 aaKnown RBP3.31□□□□□ -1.88
SRL1YOR247W YME1P32795 747 aa3.31□□□□□ -1.88
SRL1YOR247W DBP8P38719 431 aa3.31□□□□□ -1.88
SRL1YOR247W SGN1P40561 250 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
SRL1YOR247W PET130P47065 347 aa3.31□□□□□ -1.88
SRL1YOR247W IMD4P50094 524 aaKnown RBP3.31□□□□□ -1.88
SRL1YOR247W ERG26P53199 349 aaKnown RBP3.31□□□□□ -1.88
SRL1YOR247W ERO1Q03103 563 aa3.31□□□□□ -1.88
SRL1YOR247W EMI2Q04409 500 aaKnown RBP3.31□□□□□ -1.88
SRL1YOR247W ECM22Q05958 814 aaPredicted RBP3.31□□□□□ -1.88
SRL1YOR247W MRD1Q06106 887 aaKnown RBP3.31□□□□□ -1.88
SRL1YOR247W PDR8Q06149 701 aa3.31□□□□□ -1.88
SRL1YOR247W YLR455WQ06188 304 aa3.31□□□□□ -1.88
SRL1YOR247W VTA1Q06263 330 aa3.31□□□□□ -1.88
SRL1YOR247W TPO3Q06451 622 aa3.31□□□□□ -1.88
SRL1YOR247W ARG81P05085 880 aa3.3□□□□□ -1.88
SRL1YOR247W PRD1P25375 712 aa3.3□□□□□ -1.88
SRL1YOR247W ADY2P25613 283 aa3.3□□□□□ -1.88
SRL1YOR247W ADK2P26364 225 aa3.3□□□□□ -1.88
SRL1YOR247W WBP1P33767 430 aaKnown RBP3.3□□□□□ -1.88
SRL1YOR247W PMT1P33775 817 aa3.3□□□□□ -1.88
SRL1YOR247W TIF3P34167 436 aaKnown RBP3.3□□□□□ -1.88
SRL1YOR247W OCT1P35999 772 aa3.3□□□□□ -1.88
SRL1YOR247W TSC10P38342 320 aa3.3□□□□□ -1.88
SRL1YOR247W ARN1P38731 627 aa3.3□□□□□ -1.88
SRL1YOR247W CIN1P40987 1014 aa3.3□□□□□ -1.88
SRL1YOR247W HXT14P42833 540 aa3.3□□□□□ -1.88
SRL1YOR247W UBP8P50102 471 aa3.3□□□□□ -1.88
SRL1YOR247W YGR250CP53316 781 aaKnown RBP3.3□□□□□ -1.88
SRL1YOR247W CIK1Q01649 594 aa3.3□□□□□ -1.88
SRL1YOR247W SNU56Q03782 492 aaKnown RBP3.3□□□□□ -1.88
SRL1YOR247W YDR131CQ03899 556 aa3.3□□□□□ -1.88
SRL1YOR247W BSP1Q06604 576 aa3.3□□□□□ -1.88
SRL1YOR247W MCH4Q08268 501 aa3.3□□□□□ -1.88
SRL1YOR247W RLM1Q12224 676 aa3.3□□□□□ -1.88
SRL1YOR247W YRF1-4O13559 1382 aa3.29□□□□□ -1.88
SRL1YOR247W PMS1P14242 873 aa3.29□□□□□ -1.88
SRL1YOR247W SUI2P20459 304 aaKnown RBP3.29□□□□□ -1.88
SRL1YOR247W KGD1P20967 1014 aaKnown RBP3.29□□□□□ -1.88
SRL1YOR247W YCR051WP25631 222 aa3.29□□□□□ -1.88
SRL1YOR247W SEC66P33754 206 aa3.29□□□□□ -1.88
SRL1YOR247W SAS3P34218 831 aa3.29□□□□□ -1.88
SRL1YOR247W YBL055CP34220 418 aaPredicted RBP3.29□□□□□ -1.88
SRL1YOR247W YKL100CP34248 587 aa3.29□□□□□ -1.88
SRL1YOR247W APE3P37302 537 aaKnown RBP3.29□□□□□ -1.88
SRL1YOR247W IMD2P38697 523 aaKnown RBP3.29□□□□□ -1.88
SRL1YOR247W MSR1P38714 643 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms