RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C KGD2P19262 463 aaPredicted RBP3.25□□□□□ -1.89
ATG3YNR007C MCM3P24279 971 aaKnown RBP3.25□□□□□ -1.89
ATG3YNR007C SCO2P38072 301 aa3.25□□□□□ -1.89
ATG3YNR007C FUI1P38196 639 aa3.25□□□□□ -1.89
ATG3YNR007C LNP1P38878 278 aa3.25□□□□□ -1.89
ATG3YNR007C VPS45P38932 577 aa3.25□□□□□ -1.89
ATG3YNR007C STT3P39007 718 aaKnown RBP3.25□□□□□ -1.89
ATG3YNR007C TIF4631P39935 952 aaKnown RBP3.25□□□□□ -1.89
ATG3YNR007C SAP1P39955 897 aaKnown RBP3.25□□□□□ -1.89
ATG3YNR007C SAP185P40856 1058 aa3.25□□□□□ -1.89
ATG3YNR007C POL31P46957 487 aa3.25□□□□□ -1.89
ATG3YNR007C AAT1Q01802 451 aa3.25□□□□□ -1.89
ATG3YNR007C TRS31Q03337 283 aa3.25□□□□□ -1.89
ATG3YNR007C YML037CQ03703 340 aa3.25□□□□□ -1.89
ATG3YNR007C ARA2Q04212 335 aa3.25□□□□□ -1.89
ATG3YNR007C YDL242WQ07746 117 aa3.25□□□□□ -1.89
ATG3YNR007C DUR1,2P32528 1835 aaKnown RBP3.25□□□□□ -1.89
ATG3YNR007C TUS1Q06412 1307 aa3.24□□□□□ -1.89
ATG3YNR007C SES1P07284 462 aaKnown RBP3.24□□□□□ -1.89
ATG3YNR007C CDC16P09798 840 aa3.24□□□□□ -1.89
ATG3YNR007C RPL40AP0CH08 128 aaKnown RBP3.24□□□□□ -1.89
ATG3YNR007C RPL40BP0CH09 128 aaKnown RBP3.24□□□□□ -1.89
ATG3YNR007C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
ATG3YNR007C UIP5P36137 443 aa3.24□□□□□ -1.89
ATG3YNR007C STB5P38699 743 aa3.24□□□□□ -1.89
ATG3YNR007C IDS2P46958 469 aa3.24□□□□□ -1.89
ATG3YNR007C GIS2P53849 153 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89 RIP-Chip
ATG3YNR007C GRS2Q06817 618 aa3.24□□□□□ -1.89
ATG3YNR007C DSE3Q08729 430 aa3.24□□□□□ -1.89
ATG3YNR007C FLO1P32768 1537 aa3.24□□□□□ -1.89
ATG3YNR007C BIK1P11709 440 aa3.23□□□□□ -1.89
ATG3YNR007C POL3P15436 1097 aa3.23□□□□□ -1.89
ATG3YNR007C DBF20P32328 564 aa3.23□□□□□ -1.89
ATG3YNR007C XRS2P33301 854 aa3.23□□□□□ -1.89
ATG3YNR007C MRPL36P36531 177 aa3.23□□□□□ -1.89
ATG3YNR007C RFC1P38630 861 aaKnown RBP3.23□□□□□ -1.89
ATG3YNR007C NPR3P38742 1146 aa3.23□□□□□ -1.89
ATG3YNR007C SPC72P39723 622 aa3.23□□□□□ -1.89
ATG3YNR007C HMF1P40037 129 aaKnown RBP3.23□□□□□ -1.89
ATG3YNR007C VID27P40157 782 aa3.23□□□□□ -1.89
ATG3YNR007C CAB2P40506 365 aa3.23□□□□□ -1.89
ATG3YNR007C IMA1P53051 589 aa3.23□□□□□ -1.89
ATG3YNR007C MOT3P54785 490 aaKnown RBP3.23□□□□□ -1.89
ATG3YNR007C YAT1P80235 687 aa3.23□□□□□ -1.89
ATG3YNR007C YML053CQ04978 212 aa3.23□□□□□ -1.89
ATG3YNR007C BLS1Q06071 122 aa3.23□□□□□ -1.89
ATG3YNR007C PFA4Q12006 378 aa3.23□□□□□ -1.89
ATG3YNR007C RTP1Q12751 981 aa3.23□□□□□ -1.89
ATG3YNR007C SEN1Q00416 2231 aaKnown RBP3.23□□□□□ -1.89
ATG3YNR007C CNA1P23287 553 aa3.22□□□□□ -1.89
ATG3YNR007C YCR043CP25361 127 aa3.22□□□□□ -1.89
ATG3YNR007C YCR061WP25639 631 aa3.22□□□□□ -1.89
ATG3YNR007C FSH1P38777 243 aaKnown RBP3.22□□□□□ -1.89
ATG3YNR007C ALD5P40047 520 aaKnown RBP3.22□□□□□ -1.89
ATG3YNR007C TES1P41903 349 aaKnown RBP3.22□□□□□ -1.89
ATG3YNR007C YJL107CP42947 387 aa3.22□□□□□ -1.89
ATG3YNR007C ACS1Q01574 713 aa3.22□□□□□ -1.89
ATG3YNR007C ATG21Q02887 496 aa3.22□□□□□ -1.89
ATG3YNR007C AIM6Q07716 390 aa3.22□□□□□ -1.89
ATG3YNR007C YPL191CQ08930 360 aa3.22□□□□□ -1.89
ATG3YNR007C RRI1Q12468 440 aa3.22□□□□□ -1.89
ATG3YNR007C YER175W-AQ8TGU4 54 aa3.22□□□□□ -1.89
ATG3YNR007C CSF1Q12150 2958 aa3.21□□□□□ -1.89
ATG3YNR007C RAD50P12753 1312 aa3.21□□□□□ -1.89
ATG3YNR007C MTF2P10849 440 aa3.21□□□□□ -1.9
ATG3YNR007C TRX2P22803 104 aaKnown RBP3.21□□□□□ -1.9
ATG3YNR007C RIT1P23796 513 aa3.21□□□□□ -1.9
ATG3YNR007C YCL049CP25577 312 aa3.21□□□□□ -1.9
ATG3YNR007C MCR1P36060 302 aaKnown RBP3.21□□□□□ -1.9
ATG3YNR007C PHO88P38264 188 aaPredicted RBP3.21□□□□□ -1.9
ATG3YNR007C OPY1P38271 328 aa3.21□□□□□ -1.9
ATG3YNR007C ARC40P38328 384 aaKnown RBP3.21□□□□□ -1.9
ATG3YNR007C ARO9P38840 513 aaPredicted RBP3.21□□□□□ -1.9
ATG3YNR007C ERV46P39727 415 aa3.21□□□□□ -1.9
ATG3YNR007C NOC2P39744 710 aaKnown RBP3.21□□□□□ -1.9
ATG3YNR007C PUG1P40100 303 aa3.21□□□□□ -1.9
ATG3YNR007C YMR147WP40218 223 aaKnown RBP3.21□□□□□ -1.9
ATG3YNR007C RPT2P40327 437 aaKnown RBP3.21□□□□□ -1.9
ATG3YNR007C YPT11P48559 417 aa3.21□□□□□ -1.9
ATG3YNR007C ORC5P50874 479 aa3.21□□□□□ -1.9
ATG3YNR007C LIF1P53150 421 aa3.21□□□□□ -1.9
ATG3YNR007C RPT6Q01939 405 aaKnown RBP3.21□□□□□ -1.9
ATG3YNR007C MRPL13Q02204 264 aa3.21□□□□□ -1.9
ATG3YNR007C YPL108WQ02872 168 aaPredicted RBP3.21□□□□□ -1.9
ATG3YNR007C CIA1Q05583 330 aa3.21□□□□□ -1.9
ATG3YNR007C ECM22Q05958 814 aaPredicted RBP3.21□□□□□ -1.9
ATG3YNR007C SPH1Q06160 661 aa3.21□□□□□ -1.9
ATG3YNR007C MLH2Q07980 695 aa3.21□□□□□ -1.9
ATG3YNR007C NUC1P08466 329 aa3.2□□□□□ -1.9
ATG3YNR007C APA1P16550 321 aaKnown RBP3.2□□□□□ -1.9
ATG3YNR007C TKL1P23254 680 aaKnown RBP3.2□□□□□ -1.9
ATG3YNR007C CLB4P24871 460 aa3.2□□□□□ -1.9
ATG3YNR007C PRE2P30656 287 aaKnown RBP3.2□□□□□ -1.9
ATG3YNR007C UTR4P32626 227 aa3.2□□□□□ -1.9
ATG3YNR007C SAS3P34218 831 aa3.2□□□□□ -1.9
ATG3YNR007C VBA2P38358 474 aaKnown RBP3.2□□□□□ -1.9
ATG3YNR007C RTT107P38850 1070 aa3.2□□□□□ -1.9
ATG3YNR007C MMF1P40185 145 aaKnown RBP3.2□□□□□ -1.9
ATG3YNR007C SPO22P40511 975 aa3.2□□□□□ -1.9
ATG3YNR007C TRS130Q03660 1102 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms