RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W AEP1P32493 518 aa6.14□□□□□ -1.43
CAF40YNL288W CTF13P35203 478 aa6.14□□□□□ -1.43
CAF40YNL288W YBP1P38315 674 aa6.14□□□□□ -1.43
CAF40YNL288W HSE1P38753 452 aa6.14□□□□□ -1.43
CAF40YNL288W MIC19P43594 170 aa6.14□□□□□ -1.43
CAF40YNL288W FAA4P47912 694 aaKnown RBP6.14□□□□□ -1.43
CAF40YNL288W MNT2P53059 558 aa6.14□□□□□ -1.43
CAF40YNL288W YGL140CP53120 1219 aa6.14□□□□□ -1.43
CAF40YNL288W GSF2Q04697 403 aaKnown RBP6.14□□□□□ -1.43
CAF40YNL288W ADY3Q07732 790 aa6.14□□□□□ -1.43
CAF40YNL288W CUE5Q08412 411 aaKnown RBP6.14□□□□□ -1.43
CAF40YNL288W MCD1Q12158 566 aa6.14□□□□□ -1.43
CAF40YNL288W LDB17Q12342 491 aa6.14□□□□□ -1.43
CAF40YNL288W YOR338WQ99326 363 aa6.14□□□□□ -1.43
CAF40YNL288W GCD1P09032 578 aaPredicted RBP6.13□□□□□ -1.43
CAF40YNL288W RBK1P25332 333 aa6.13□□□□□ -1.43
CAF40YNL288W YME1P32795 747 aa6.13□□□□□ -1.43
CAF40YNL288W MAK5P38112 773 aaPredicted RBP6.13□□□□□ -1.43
CAF40YNL288W RPS26AP39938 119 aaKnown RBP6.13□□□□□ -1.43
CAF40YNL288W RPS26BP39939 119 aaKnown RBP6.13□□□□□ -1.43
CAF40YNL288W PAN6P40459 309 aa6.13□□□□□ -1.43
CAF40YNL288W SER33P40510 469 aa6.13□□□□□ -1.43
CAF40YNL288W GLG2P47011 380 aa6.13□□□□□ -1.43
CAF40YNL288W COG1P53079 417 aa6.13□□□□□ -1.43
CAF40YNL288W NOP15P53927 220 aaPredicted RBP6.13□□□□□ -1.43
CAF40YNL288W KTR5P53966 522 aaPredicted RBP6.13□□□□□ -1.43
CAF40YNL288W SDH1Q00711 640 aa6.13□□□□□ -1.43
CAF40YNL288W NUP100Q02629 959 aa6.13□□□□□ -1.43
CAF40YNL288W PPN1Q04119 674 aa6.13□□□□□ -1.43
CAF40YNL288W RAD3P06839 778 aa6.12□□□□□ -1.43
CAF40YNL288W ILS1P09436 1072 aaKnown RBP6.12□□□□□ -1.43
CAF40YNL288W GPA2P10823 449 aa6.12□□□□□ -1.43
CAF40YNL288W MRPL25P23369 157 aa6.12□□□□□ -1.43
CAF40YNL288W PRE9P23638 258 aaKnown RBP6.12□□□□□ -1.43
CAF40YNL288W YCL068CP25593 260 aa6.12□□□□□ -1.43
CAF40YNL288W CDC20P26309 610 aa6.12□□□□□ -1.43
CAF40YNL288W ALY1P36117 915 aa6.12□□□□□ -1.43
CAF40YNL288W YHR078WP38799 552 aa6.12□□□□□ -1.43
CAF40YNL288W PIK1P39104 1066 aa6.12□□□□□ -1.43
CAF40YNL288W RGI2P40188 164 aa6.12□□□□□ -1.43
CAF40YNL288W YJR061WP40355 935 aa6.12□□□□□ -1.43
CAF40YNL288W SAP4P53036 818 aa6.12□□□□□ -1.43
CAF40YNL288W YNL143CP53908 130 aa6.12□□□□□ -1.43
CAF40YNL288W SLT2Q00772 484 aa6.12□□□□□ -1.43
CAF40YNL288W REG1Q00816 1014 aa6.12□□□□□ -1.43
CAF40YNL288W PET117Q02771 107 aa6.12□□□□□ -1.43
CAF40YNL288W YMR178WQ03219 274 aaKnown RBP6.12□□□□□ -1.43
CAF40YNL288W TRS31Q03337 283 aa6.12□□□□□ -1.43
CAF40YNL288W NHX1Q04121 633 aa6.12□□□□□ -1.43
CAF40YNL288W MCP2Q06567 569 aa6.12□□□□□ -1.43
CAF40YNL288W TGL5Q12043 749 aa6.12□□□□□ -1.43
CAF40YNL288W MSB2P32334 1306 aa6.11□□□□□ -1.43
CAF40YNL288W TEF1P02994 458 aaKnown RBP6.11□□□□□ -1.43
CAF40YNL288W INO1P11986 533 aa6.11□□□□□ -1.43
CAF40YNL288W BRF1P29056 596 aa6.11□□□□□ -1.43
CAF40YNL288W IMP3P32899 183 aaPredicted RBP6.11□□□□□ -1.43
CAF40YNL288W PMT1P33775 817 aa6.11□□□□□ -1.43
CAF40YNL288W MRP21P38175 177 aa6.11□□□□□ -1.43
CAF40YNL288W STN1P38960 494 aa6.11□□□□□ -1.43
CAF40YNL288W RPH1P39956 796 aa6.11□□□□□ -1.43
CAF40YNL288W PIC2P40035 300 aa6.11□□□□□ -1.43
CAF40YNL288W PXA1P41909 870 aa6.11□□□□□ -1.43
CAF40YNL288W EMC4P53073 190 aa6.11□□□□□ -1.43
CAF40YNL288W PEX8P53248 589 aa6.11□□□□□ -1.43
CAF40YNL288W CWC24P53769 259 aa6.11□□□□□ -1.43
CAF40YNL288W TPP1Q03796 238 aa6.11□□□□□ -1.43
CAF40YNL288W YML053CQ04978 212 aa6.11□□□□□ -1.43
CAF40YNL288W ADE13Q05911 482 aaKnown RBP6.11□□□□□ -1.43
CAF40YNL288W SLD7Q08457 257 aa6.11□□□□□ -1.43
CAF40YNL288W YVC1Q12324 675 aa6.11□□□□□ -1.43
CAF40YNL288W YLR149CQ99296 730 aa6.11□□□□□ -1.43
CAF40YNL288W ATP12P22135 325 aa6.1□□□□□ -1.43
CAF40YNL288W CCR4P31384 837 aaKnown RBP6.1□□□□□ -1.43
CAF40YNL288W YKL151CP36059 337 aa6.1□□□□□ -1.43
CAF40YNL288W LDB7P38210 180 aa6.1□□□□□ -1.43
CAF40YNL288W YSW1P38280 609 aa6.1□□□□□ -1.43
CAF40YNL288W LRP1P38801 184 aaKnown RBP6.1□□□□□ -1.43
CAF40YNL288W REV7P38927 245 aa6.1□□□□□ -1.43
CAF40YNL288W SMX2P40204 77 aaKnown RBP6.1□□□□□ -1.43
CAF40YNL288W COQ5P49017 307 aa6.1□□□□□ -1.43
CAF40YNL288W ZIP2P53061 704 aa6.1□□□□□ -1.43
CAF40YNL288W COG7P53195 279 aa6.1□□□□□ -1.43
CAF40YNL288W SMA1Q02651 245 aa6.1□□□□□ -1.43
CAF40YNL288W YDR132CQ03900 495 aa6.1□□□□□ -1.43
CAF40YNL288W YDR109CQ04585 715 aa6.1□□□□□ -1.43
CAF40YNL288W CDC123Q05791 360 aa6.1□□□□□ -1.43
CAF40YNL288W OPI10Q08202 246 aa6.1□□□□□ -1.43
CAF40YNL288W PUS7Q08647 676 aaKnown RBP6.1□□□□□ -1.43
CAF40YNL288W RAD1P06777 1100 aa6.09□□□□□ -1.43
CAF40YNL288W RPB2P08518 1224 aaKnown RBP6.09□□□□□ -1.43
CAF40YNL288W ERG20P08524 352 aaKnown RBP6.09□□□□□ -1.43
CAF40YNL288W POL30P15873 258 aaKnown RBP6.09□□□□□ -1.43
CAF40YNL288W UBA1P22515 1024 aaKnown RBP6.09□□□□□ -1.43
CAF40YNL288W RIM1P32445 135 aaKnown RBP6.09□□□□□ -1.43
CAF40YNL288W STB6P36085 766 aa6.09□□□□□ -1.43
CAF40YNL288W TCD2P36101 447 aaKnown RBP6.09□□□□□ -1.43
CAF40YNL288W PCF11P39081 626 aaPredicted RBP6.09□□□□□ -1.43
CAF40YNL288W SEO1P39709 593 aa6.09□□□□□ -1.43
CAF40YNL288W TES1P41903 349 aaKnown RBP6.09□□□□□ -1.43
CAF40YNL288W YFL012WP43580 148 aa6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 72.6 ms