RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C CLB2P24869 491 aa4.77□□□□□ -1.65
CUS1YMR240C ROX1P25042 368 aa4.77□□□□□ -1.65
CUS1YMR240C SRO77P38163 1010 aa4.77□□□□□ -1.65
CUS1YMR240C SNO3P43544 222 aa4.77□□□□□ -1.65
CUS1YMR240C ROK1P45818 564 aaPredicted RBP4.77□□□□□ -1.65
CUS1YMR240C NNF2P53253 936 aa4.77□□□□□ -1.65
CUS1YMR240C YGR127WP53275 312 aa4.77□□□□□ -1.65
CUS1YMR240C IDP3P53982 420 aaKnown RBP4.77□□□□□ -1.65
CUS1YMR240C SWF1Q04629 336 aa4.77□□□□□ -1.65
CUS1YMR240C NDJ1Q12366 352 aa4.77□□□□□ -1.65
CUS1YMR240C SFI1Q12369 946 aa4.77□□□□□ -1.65
CUS1YMR240C PGK1P00560 416 aaKnown RBP4.76□□□□□ -1.65
CUS1YMR240C MET17P06106 444 aa4.76□□□□□ -1.65
CUS1YMR240C FUR1P18562 216 aaKnown RBP4.76□□□□□ -1.65
CUS1YMR240C APN1P22936 367 aa4.76□□□□□ -1.65
CUS1YMR240C PUP3P25451 205 aaKnown RBP4.76□□□□□ -1.65
CUS1YMR240C COQ3P27680 312 aa4.76□□□□□ -1.65
CUS1YMR240C YBR144CP34215 104 aa4.76□□□□□ -1.65
CUS1YMR240C AFG3P39925 761 aa4.76□□□□□ -1.65
CUS1YMR240C YEL057CP39983 233 aa4.76□□□□□ -1.65
CUS1YMR240C APT1P49435 187 aaKnown RBP4.76□□□□□ -1.65
CUS1YMR240C UBP8P50102 471 aa4.76□□□□□ -1.65
CUS1YMR240C ASI1P54074 624 aa4.76□□□□□ -1.65
CUS1YMR240C VPS38Q05919 439 aa4.76□□□□□ -1.65
CUS1YMR240C RTT109Q07794 436 aa4.76□□□□□ -1.65
CUS1YMR240C AVL9Q12500 764 aa4.76□□□□□ -1.65
CUS1YMR240C PGA3Q12746 312 aaKnown RBP4.76□□□□□ -1.65
CUS1YMR240C KGD1P20967 1014 aaKnown RBP4.75□□□□□ -1.65
CUS1YMR240C ERG3P32353 365 aa4.75□□□□□ -1.65
CUS1YMR240C SEF1P34228 1148 aa4.75□□□□□ -1.65
CUS1YMR240C TSC10P38342 320 aa4.75□□□□□ -1.65
CUS1YMR240C VPS41P38959 992 aa4.75□□□□□ -1.65
CUS1YMR240C MET18P40469 1032 aa4.75□□□□□ -1.65
CUS1YMR240C ERG26P53199 349 aaKnown RBP4.75□□□□□ -1.65
CUS1YMR240C YTP1P53584 459 aa4.75□□□□□ -1.65
CUS1YMR240C JJJ1P53863 590 aa4.75□□□□□ -1.65
CUS1YMR240C BOP3P53958 396 aa4.75□□□□□ -1.65
CUS1YMR240C RSC9Q03124 581 aa4.75□□□□□ -1.65
CUS1YMR240C DPB4Q04603 196 aaKnown RBP4.75□□□□□ -1.65
CUS1YMR240C COQ11Q05892 277 aa4.75□□□□□ -1.65
CUS1YMR240C FRE3Q08905 711 aa4.75□□□□□ -1.65
CUS1YMR240C PFA4Q12006 378 aa4.75□□□□□ -1.65
CUS1YMR240C GRX6Q12438 231 aa4.75□□□□□ -1.65
CUS1YMR240C EST1P17214 699 aaPredicted RBP4.74□□□□□ -1.65
CUS1YMR240C IMG1P25626 169 aa4.74□□□□□ -1.65
CUS1YMR240C SYN8P31377 255 aa4.74□□□□□ -1.65
CUS1YMR240C NFU1P32860 256 aa4.74□□□□□ -1.65
CUS1YMR240C TIF3P34167 436 aaKnown RBP4.74□□□□□ -1.65
CUS1YMR240C UBP11P36026 717 aa4.74□□□□□ -1.65
CUS1YMR240C MIA40P36046 403 aa4.74□□□□□ -1.65
CUS1YMR240C CUE2P36075 443 aaKnown RBP4.74□□□□□ -1.65
CUS1YMR240C RKM3P38222 552 aa4.74□□□□□ -1.65
CUS1YMR240C VID24P38263 362 aa4.74□□□□□ -1.65
CUS1YMR240C SGN1P40561 250 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
CUS1YMR240C LYS20P48570 428 aaKnown RBP4.74□□□□□ -1.65
CUS1YMR240C RRG1Q12167 365 aaPredicted RBP4.74□□□□□ -1.65
CUS1YMR240C RTN2Q12443 393 aa4.74□□□□□ -1.65
CUS1YMR240C YNL162W-AQ3E7A8 72 aa4.74□□□□□ -1.65
CUS1YMR240C YMR085WP0CF18 432 aa4.73□□□□□ -1.65
CUS1YMR240C NUP1P20676 1076 aa4.73□□□□□ -1.65
CUS1YMR240C CNA1P23287 553 aa4.73□□□□□ -1.65
CUS1YMR240C BOS1P25385 244 aa4.73□□□□□ -1.65
CUS1YMR240C GAC1P28006 793 aa4.73□□□□□ -1.65
CUS1YMR240C YBL055CP34220 418 aaPredicted RBP4.73□□□□□ -1.65
CUS1YMR240C TCD2P36101 447 aaKnown RBP4.73□□□□□ -1.65
CUS1YMR240C NUP133P36161 1157 aa4.73□□□□□ -1.65
CUS1YMR240C MUM2P38236 366 aa4.73□□□□□ -1.65
CUS1YMR240C DBP8P38719 431 aa4.73□□□□□ -1.65
CUS1YMR240C ALG5P40350 334 aa4.73□□□□□ -1.65
CUS1YMR240C PTR3P43606 678 aa4.73□□□□□ -1.65
CUS1YMR240C VTC3Q02725 835 aa4.73□□□□□ -1.65
CUS1YMR240C FIN1Q03898 291 aa4.73□□□□□ -1.65
CUS1YMR240C EMI2Q04409 500 aaKnown RBP4.73□□□□□ -1.65
CUS1YMR240C TEN1Q07921 160 aa4.73□□□□□ -1.65
CUS1YMR240C RIM20Q12033 661 aa4.73□□□□□ -1.65
CUS1YMR240C ERP4Q12450 207 aa4.73□□□□□ -1.65
CUS1YMR240C RRI1Q12468 440 aa4.73□□□□□ -1.65
CUS1YMR240C ART10P18634 518 aaKnown RBP4.72□□□□□ -1.65
CUS1YMR240C BUD5P25300 642 aaPredicted RBP4.72□□□□□ -1.65
CUS1YMR240C PEX2P32800 271 aa4.72□□□□□ -1.65
CUS1YMR240C CST26P38226 397 aa4.72□□□□□ -1.65
CUS1YMR240C ICS2P38284 255 aa4.72□□□□□ -1.65
CUS1YMR240C ARP1P38696 384 aa4.72□□□□□ -1.65
CUS1YMR240C TOM71P38825 639 aaKnown RBP4.72□□□□□ -1.65
CUS1YMR240C SMF1P38925 575 aa4.72□□□□□ -1.65
CUS1YMR240C CFD1P40558 293 aa4.72□□□□□ -1.65
CUS1YMR240C MAF1P41910 395 aa4.72□□□□□ -1.65
CUS1YMR240C HOS2P53096 452 aaPredicted RBP4.72□□□□□ -1.65
CUS1YMR240C COP1P53622 1201 aaKnown RBP4.72□□□□□ -1.65
CUS1YMR240C ERG13P54839 491 aaKnown RBP4.72□□□□□ -1.65
CUS1YMR240C SEG1Q04279 960 aa4.72□□□□□ -1.65
CUS1YMR240C GRC3Q07845 632 aa4.72□□□□□ -1.65
CUS1YMR240C GAL4P04386 881 aa4.72□□□□□ -1.65
CUS1YMR240C GAL80P04387 435 aa4.72□□□□□ -1.65
CUS1YMR240C ARG81P05085 880 aa4.72□□□□□ -1.65
CUS1YMR240C MRP13P12686 339 aa4.72□□□□□ -1.65
CUS1YMR240C PDA1P16387 420 aaKnown RBP4.72□□□□□ -1.65
CUS1YMR240C PRD1P25375 712 aa4.72□□□□□ -1.65
CUS1YMR240C MRE11P32829 692 aa4.72□□□□□ -1.65
CUS1YMR240C WBP1P33767 430 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 124.5 ms