RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C GTB1Q04924 702 aa4.7□□□□□ -1.66
EAR1YMR171C PGK1P00560 416 aaKnown RBP4.69□□□□□ -1.66
EAR1YMR171C TCP1P12612 559 aaKnown RBP4.69□□□□□ -1.66
EAR1YMR171C THR1P17423 357 aaKnown RBP4.69□□□□□ -1.66
EAR1YMR171C YSC83P32792 385 aa4.69□□□□□ -1.66
EAR1YMR171C YME2P32843 850 aa4.69□□□□□ -1.66
EAR1YMR171C TFC3P34111 1160 aa4.69□□□□□ -1.66
EAR1YMR171C POP4P38336 279 aa4.69□□□□□ -1.66
EAR1YMR171C SCS2P40075 244 aaKnown RBP4.69□□□□□ -1.66
EAR1YMR171C ULP2P40537 1034 aaPredicted RBP4.69□□□□□ -1.66
EAR1YMR171C LCB2P40970 561 aa4.69□□□□□ -1.66
EAR1YMR171C MPS3P47069 682 aa4.69□□□□□ -1.66
EAR1YMR171C PUS4P48567 403 aaKnown RBP4.69□□□□□ -1.66
EAR1YMR171C VPS4P52917 437 aa4.69□□□□□ -1.66
EAR1YMR171C YAP1802P53309 568 aa4.69□□□□□ -1.66
EAR1YMR171C SOL4P53315 255 aa4.69□□□□□ -1.66
EAR1YMR171C DIP5P53388 608 aa4.69□□□□□ -1.66
EAR1YMR171C FDC1Q03034 503 aa4.69□□□□□ -1.66
EAR1YMR171C YMR206WQ03695 313 aa4.69□□□□□ -1.66
EAR1YMR171C TMA64Q04600 565 aaKnown RBP4.69□□□□□ -1.66
EAR1YMR171C PUS9Q12069 462 aa4.69□□□□□ -1.66
EAR1YMR171C DIN7Q12086 430 aa4.69□□□□□ -1.66
EAR1YMR171C YOL114CQ12322 202 aa4.69□□□□□ -1.66
EAR1YMR171C ARP6Q12509 438 aa4.69□□□□□ -1.66
EAR1YMR171C FLO11P08640 1367 aa4.69□□□□□ -1.66
EAR1YMR171C CTT1P06115 562 aa4.68□□□□□ -1.66
EAR1YMR171C ILV2P07342 687 aaKnown RBP4.68□□□□□ -1.66
EAR1YMR171C YML002WP0CF17 737 aa4.68□□□□□ -1.66
EAR1YMR171C CWH43P25618 953 aa4.68□□□□□ -1.66
EAR1YMR171C TGL1P34163 548 aa4.68□□□□□ -1.66
EAR1YMR171C EHT1P38295 451 aa4.68□□□□□ -1.66
EAR1YMR171C HSM3P38348 480 aa4.68□□□□□ -1.66
EAR1YMR171C RIM4P38741 713 aa4.68□□□□□ -1.66
EAR1YMR171C TMN3P40071 706 aa4.68□□□□□ -1.66
EAR1YMR171C YMR134WP40207 237 aa4.68□□□□□ -1.66
EAR1YMR171C GPD2P41911 440 aaKnown RBP4.68□□□□□ -1.66
EAR1YMR171C QRI7P43122 407 aa4.68□□□□□ -1.66
EAR1YMR171C TAF6P53040 516 aa4.68□□□□□ -1.66
EAR1YMR171C YNR071CP53757 342 aa4.68□□□□□ -1.66
EAR1YMR171C KTR5P53966 522 aaPredicted RBP4.68□□□□□ -1.66
EAR1YMR171C UBX4P54730 416 aa4.68□□□□□ -1.66
EAR1YMR171C YMR027WQ04371 470 aa4.68□□□□□ -1.66
EAR1YMR171C HLR1Q04429 423 aa4.68□□□□□ -1.66
EAR1YMR171C CRF1Q04930 467 aa4.68□□□□□ -1.66
EAR1YMR171C GPN2Q08726 347 aaPredicted RBP4.68□□□□□ -1.66
EAR1YMR171C MSS18P08593 268 aa4.67□□□□□ -1.66
EAR1YMR171C REC107P21651 314 aa4.67□□□□□ -1.66
EAR1YMR171C CAP1P28495 268 aaKnown RBP4.67□□□□□ -1.66
EAR1YMR171C MUD1P32605 298 aaKnown RBP4.67□□□□□ -1.66
EAR1YMR171C SDS22P36047 338 aa4.67□□□□□ -1.66
EAR1YMR171C YHL041WP38730 149 aa4.67□□□□□ -1.66
EAR1YMR171C NDT80P38830 627 aa4.67□□□□□ -1.66
EAR1YMR171C CHS7P38843 316 aa4.67□□□□□ -1.66
EAR1YMR171C PMC1P38929 1173 aaPredicted RBP4.67□□□□□ -1.66
EAR1YMR171C SSP120P39931 234 aaKnown RBP4.67□□□□□ -1.66
EAR1YMR171C KHA1P40309 873 aa4.67□□□□□ -1.66
EAR1YMR171C YML6P51998 286 aa4.67□□□□□ -1.66
EAR1YMR171C LIF1P53150 421 aa4.67□□□□□ -1.66
EAR1YMR171C MUK1Q02866 612 aa4.67□□□□□ -1.66
EAR1YMR171C USV1Q12132 391 aa4.67□□□□□ -1.66
EAR1YMR171C CMD1P06787 147 aaKnown RBP4.67□□□□□ -1.66
EAR1YMR171C HEM15P16622 393 aa4.67□□□□□ -1.66
EAR1YMR171C GPI10P30777 616 aa4.67□□□□□ -1.66
EAR1YMR171C SIN4P32259 974 aa4.67□□□□□ -1.66
EAR1YMR171C NTH1P32356 751 aa4.67□□□□□ -1.66
EAR1YMR171C EFB1P32471 206 aaKnown RBP4.67□□□□□ -1.66
EAR1YMR171C CTP1P38152 299 aa4.67□□□□□ -1.66
EAR1YMR171C PCL5P38794 229 aa4.67□□□□□ -1.66
EAR1YMR171C LIN1P38852 340 aaPredicted RBP4.67□□□□□ -1.66
EAR1YMR171C FIS1P40515 155 aa4.67□□□□□ -1.66
EAR1YMR171C AXL1P40851 1208 aa4.67□□□□□ -1.66
EAR1YMR171C RPS0BP46654 252 aaKnown RBP4.67□□□□□ -1.66
EAR1YMR171C TAH11P47112 604 aa4.67□□□□□ -1.66
EAR1YMR171C LGE1Q02796 332 aaKnown RBP4.67□□□□□ -1.66
EAR1YMR171C UFO1Q04511 668 aa4.67□□□□□ -1.66
EAR1YMR171C DBP10Q12389 995 aaKnown RBP4.67□□□□□ -1.66
EAR1YMR171C ARP7Q12406 477 aa4.67□□□□□ -1.66
EAR1YMR171C URA3P03962 267 aa4.66□□□□□ -1.66
EAR1YMR171C RPS3P05750 240 aaKnown RBP4.66□□□□□ -1.66
EAR1YMR171C RPC19P28000 142 aaKnown RBP4.66□□□□□ -1.66
EAR1YMR171C CBF2P32504 956 aa4.66□□□□□ -1.66
EAR1YMR171C PET309P32522 965 aaPredicted RBP4.66□□□□□ -1.66
EAR1YMR171C SET3P36124 751 aa4.66□□□□□ -1.66
EAR1YMR171C PCA1P38360 1216 aa4.66□□□□□ -1.66
EAR1YMR171C SPC97P38863 823 aa4.66□□□□□ -1.66
EAR1YMR171C GVP36P40531 326 aaKnown RBP4.66□□□□□ -1.66
EAR1YMR171C IMA5P40884 581 aa4.66□□□□□ -1.66
EAR1YMR171C SEC27P41811 889 aaKnown RBP4.66□□□□□ -1.66
EAR1YMR171C HOP2P53187 214 aa4.66□□□□□ -1.66
EAR1YMR171C YNL040WP53960 456 aaPredicted RBP4.66□□□□□ -1.66
EAR1YMR171C ARK1P53974 638 aa4.66□□□□□ -1.66
EAR1YMR171C YDR222WQ04925 415 aa4.66□□□□□ -1.66
EAR1YMR171C IVY1Q04934 453 aa4.66□□□□□ -1.66
EAR1YMR171C IZH3Q07959 543 aa4.66□□□□□ -1.66
EAR1YMR171C ABP140Q08641 628 aaKnown RBP4.66□□□□□ -1.66
EAR1YMR171C OSW1Q08692 278 aa4.66□□□□□ -1.66
EAR1YMR171C YPT6Q99260 215 aa4.66□□□□□ -1.66
EAR1YMR171C CBF1P17106 351 aa4.65□□□□□ -1.66
EAR1YMR171C DAL2P25335 343 aa4.65□□□□□ -1.66
EAR1YMR171C FUB1P25659 250 aa4.65□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms