RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W ENT4Q07872 247 aa3.61□□□□□ -1.83
VPS38YLR360W TAH18Q12181 623 aa3.61□□□□□ -1.83
VPS38YLR360W CBF2P32504 956 aa3.6□□□□□ -1.83
VPS38YLR360W TRS65P32893 560 aa3.6□□□□□ -1.83
VPS38YLR360W UIP3P39547 235 aa3.6□□□□□ -1.83
VPS38YLR360W ATG27P46989 271 aa3.6□□□□□ -1.83
VPS38YLR360W ZDS2P54786 942 aa3.6□□□□□ -1.83
VPS38YLR360W INA17Q02888 182 aa3.6□□□□□ -1.83
VPS38YLR360W EMI2Q04409 500 aaKnown RBP3.6□□□□□ -1.83
VPS38YLR360W YLR352WQ06479 807 aa3.6□□□□□ -1.83
VPS38YLR360W RDR1Q08904 546 aa3.6□□□□□ -1.83
VPS38YLR360W SKM1Q12469 655 aa3.6□□□□□ -1.83
VPS38YLR360W FUM1P08417 488 aaKnown RBP3.59□□□□□ -1.83
VPS38YLR360W BAR1P12630 587 aa3.59□□□□□ -1.83
VPS38YLR360W PRE8P23639 250 aa3.59□□□□□ -1.83
VPS38YLR360W PPZ1P26570 692 aa3.59□□□□□ -1.83
VPS38YLR360W DPB3P27344 201 aa3.59□□□□□ -1.83
VPS38YLR360W GAC1P28006 793 aa3.59□□□□□ -1.83
VPS38YLR360W RPN2P32565 945 aaKnown RBP3.59□□□□□ -1.83
VPS38YLR360W SNU114P36048 1008 aaKnown RBP3.59□□□□□ -1.83
VPS38YLR360W DIA4P38705 446 aaPredicted RBP3.59□□□□□ -1.83
VPS38YLR360W AAD10P47182 288 aa3.59□□□□□ -1.83
VPS38YLR360W YGL260WP53056 76 aa3.59□□□□□ -1.83
VPS38YLR360W RSF1Q05043 376 aa3.59□□□□□ -1.83
VPS38YLR360W VIP1Q06685 1146 aaKnown RBP3.59□□□□□ -1.83
VPS38YLR360W TCO89Q08921 799 aa3.59□□□□□ -1.83
VPS38YLR360W BSC1Q12140 328 aa3.59□□□□□ -1.83
VPS38YLR360W VMA16P23968 213 aa3.58□□□□□ -1.84
VPS38YLR360W GID7P25569 745 aa3.58□□□□□ -1.84
VPS38YLR360W PGS1P25578 521 aa3.58□□□□□ -1.84
VPS38YLR360W ERG7P38604 731 aa3.58□□□□□ -1.84
VPS38YLR360W RTT107P38850 1070 aa3.58□□□□□ -1.84
VPS38YLR360W RTS1P38903 757 aa3.58□□□□□ -1.84
VPS38YLR360W AZF1P41696 914 aa3.58□□□□□ -1.84
VPS38YLR360W DIA3P52290 468 aa3.58□□□□□ -1.84
VPS38YLR360W PKP2P53170 491 aa3.58□□□□□ -1.84
VPS38YLR360W BSC5P53755 489 aa3.58□□□□□ -1.84
VPS38YLR360W NUP100Q02629 959 aa3.58□□□□□ -1.84
VPS38YLR360W RAD30Q04049 632 aa3.58□□□□□ -1.84
VPS38YLR360W ADE13Q05911 482 aaKnown RBP3.58□□□□□ -1.84
VPS38YLR360W RIX7Q07844 837 aaKnown RBP3.58□□□□□ -1.84
VPS38YLR360W YOR111WQ99210 232 aa3.58□□□□□ -1.84
VPS38YLR360W SNF3P10870 884 aa3.57□□□□□ -1.84
VPS38YLR360W CDC24P11433 854 aaPredicted RBP3.57□□□□□ -1.84
VPS38YLR360W PWP1P21304 576 aaKnown RBP3.57□□□□□ -1.84
VPS38YLR360W MCM4P30665 933 aaKnown RBP3.57□□□□□ -1.84
VPS38YLR360W SSH4P32343 579 aa3.57□□□□□ -1.84
VPS38YLR360W PDB1P32473 366 aaKnown RBP3.57□□□□□ -1.84
VPS38YLR360W MAL33P38157 468 aa3.57□□□□□ -1.84
VPS38YLR360W DBP8P38719 431 aa3.57□□□□□ -1.84
VPS38YLR360W YNG2P38806 282 aaKnown RBP3.57□□□□□ -1.84
VPS38YLR360W DPH1P40487 425 aaKnown RBP3.57□□□□□ -1.84
VPS38YLR360W FET5P43561 622 aa3.57□□□□□ -1.84
VPS38YLR360W SIP4P46954 829 aa3.57□□□□□ -1.84
VPS38YLR360W HOS2P53096 452 aaPredicted RBP3.57□□□□□ -1.84
VPS38YLR360W TIP41Q12199 356 aa3.57□□□□□ -1.84
VPS38YLR360W CSR2Q12734 1121 aa3.57□□□□□ -1.84
VPS38YLR360W AGP2P38090 596 aa3.56□□□□□ -1.84
VPS38YLR360W ROT2P38138 954 aa3.56□□□□□ -1.84
VPS38YLR360W TSC10P38342 320 aa3.56□□□□□ -1.84
VPS38YLR360W ARP1P38696 384 aa3.56□□□□□ -1.84
VPS38YLR360W PHO90P39535 881 aa3.56□□□□□ -1.84
VPS38YLR360W ELO1P39540 310 aa3.56□□□□□ -1.84
VPS38YLR360W YIR014WP40570 242 aa3.56□□□□□ -1.84
VPS38YLR360W ARC1P46672 376 aaKnown RBP3.56□□□□□ -1.84
VPS38YLR360W SOL4P53315 255 aa3.56□□□□□ -1.84
VPS38YLR360W ECM30Q06673 1274 aa3.56□□□□□ -1.84
VPS38YLR360W GRC3Q07845 632 aa3.56□□□□□ -1.84
VPS38YLR360W LEU9Q12166 604 aaKnown RBP3.56□□□□□ -1.84
VPS38YLR360W ARG81P05085 880 aa3.55□□□□□ -1.84
VPS38YLR360W CDC23P16522 626 aa3.55□□□□□ -1.84
VPS38YLR360W MIC60P36112 540 aa3.55□□□□□ -1.84
VPS38YLR360W RIM2P38127 377 aa3.55□□□□□ -1.84
VPS38YLR360W UBA4P38820 440 aa3.55□□□□□ -1.84
VPS38YLR360W RGI2P40188 164 aa3.55□□□□□ -1.84
VPS38YLR360W LYS14P40971 790 aa3.55□□□□□ -1.84
VPS38YLR360W SGM1P47166 707 aa3.55□□□□□ -1.84
VPS38YLR360W LYS4P49367 693 aaPredicted RBP3.55□□□□□ -1.84
VPS38YLR360W YMR317WQ04893 1140 aa3.55□□□□□ -1.84
VPS38YLR360W RPS10AQ08745 105 aaPredicted RBP3.55□□□□□ -1.84
VPS38YLR360W NKP1Q12493 238 aa3.55□□□□□ -1.84
VPS38YLR360W GLN3P18494 730 aa3.54□□□□□ -1.84
VPS38YLR360W ADH7P25377 361 aa3.54□□□□□ -1.84
VPS38YLR360W SEC1P30619 724 aaKnown RBP3.54□□□□□ -1.84
VPS38YLR360W PHD1P36093 366 aa3.54□□□□□ -1.84
VPS38YLR360W FMP46P36141 133 aaKnown RBP3.54□□□□□ -1.84
VPS38YLR360W PTR3P43606 678 aa3.54□□□□□ -1.84
VPS38YLR360W RPS10BP46784 105 aaKnown RBP3.54□□□□□ -1.84
VPS38YLR360W ERG26P53199 349 aaKnown RBP3.54□□□□□ -1.84
VPS38YLR360W CUL3P53202 744 aa3.54□□□□□ -1.84
VPS38YLR360W MEP3P53390 489 aa3.54□□□□□ -1.84
VPS38YLR360W RSM23Q01163 450 aa3.54□□□□□ -1.84
VPS38YLR360W YSA1Q01976 231 aa3.54□□□□□ -1.84
VPS38YLR360W DPB4Q04603 196 aaKnown RBP3.54□□□□□ -1.84
VPS38YLR360W TEN1Q07921 160 aa3.54□□□□□ -1.84
VPS38YLR360W PUT2P07275 575 aa3.53□□□□□ -1.84
VPS38YLR360W MCM10P32354 571 aa3.53□□□□□ -1.84
VPS38YLR360W AUR1P36107 401 aaPredicted RBP3.53□□□□□ -1.84
VPS38YLR360W YBL029WP38201 376 aa3.53□□□□□ -1.84
VPS38YLR360W RRP3P38712 501 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms