RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	STT3	P39007	718 aa	Known RBP	5.73	□□□□□ -1.49
DBP9	YLR276C	PES4	P39684	611 aa		5.73	□□□□□ -1.49
DBP9	YLR276C	YTA12	P40341	825 aa		5.73	□□□□□ -1.49
DBP9	YLR276C	VHR1	P40522	640 aa		5.73	□□□□□ -1.49
DBP9	YLR276C	MAD2	P40958	196 aa		5.73	□□□□□ -1.49
DBP9	YLR276C	YFL066C	P43538	392 aa		5.73	□□□□□ -1.49
DBP9	YLR276C	EPL1	P43572	832 aa		5.73	□□□□□ -1.49
DBP9	YLR276C	USE1	P53146	245 aa		5.73	□□□□□ -1.49
DBP9	YLR276C	COG2	P53271	262 aa		5.73	□□□□□ -1.49
DBP9	YLR276C	ZRG17	P53735	605 aa		5.73	□□□□□ -1.49
DBP9	YLR276C	GCN5	Q03330	439 aa		5.73	□□□□□ -1.49
DBP9	YLR276C	EBS1	Q03466	884 aa	Known RBP	5.73	□□□□□ -1.49
DBP9	YLR276C	YDR239C	Q03780	787 aa		5.73	□□□□□ -1.49
DBP9	YLR276C	TAF11	Q04226	346 aa		5.73	□□□□□ -1.49
DBP9	YLR276C	GSF2	Q04697	403 aa	Known RBP	5.73	□□□□□ -1.49
DBP9	YLR276C	ECI1	Q05871	280 aa		5.73	□□□□□ -1.49
DBP9	YLR276C	BAG7	Q12128	409 aa		5.73	□□□□□ -1.49
DBP9	YLR276C	SPS1	P08458	490 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	YEL076C-A	P0CX16	216 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	YLR464W	P0CX17	216 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	ALG1	P16661	449 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	DBP3	P20447	523 aa	Known RBP	5.72	□□□□□ -1.49
DBP9	YLR276C	MCM3	P24279	971 aa	Known RBP	5.72	□□□□□ -1.49
DBP9	YLR276C	CAD1	P24813	409 aa	Known RBP	5.72	□□□□□ -1.49
DBP9	YLR276C	RPC53	P25441	422 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
DBP9	YLR276C	YME1	P32795	747 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	PXA2	P34230	853 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	RSM22	P36056	628 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	MRPL17	P36528	281 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	YEL076C	P39971	216 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	SER3	P40054	469 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	DDI1	P40087	428 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	SER33	P40510	469 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	PAC11	P40960	533 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	IRC6	P43615	237 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	AIP1	P46680	615 aa	Known RBP	5.72	□□□□□ -1.49
DBP9	YLR276C	CUE3	P53137	624 aa	Known RBP	5.72	□□□□□ -1.49
DBP9	YLR276C	PGA2	P53903	129 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	ORC3	P54790	616 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	ARV1	Q06541	321 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	MCH5	Q08777	521 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	TY1A-NL1	Q12391	440 aa	Known RBP	5.72	□□□□□ -1.49
DBP9	YLR276C	VCX1	Q99385	411 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	RPS4A	P0CX35	261 aa	Known RBP	5.72	□□□□□ -1.49
DBP9	YLR276C	RPS4B	P0CX36	261 aa	Known RBP	5.72	□□□□□ -1.49
DBP9	YLR276C	MER1	P16523	270 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
DBP9	YLR276C	VPS3	P23643	1011 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	SWI4	P25302	1093 aa	Known RBP	5.72	□□□□□ -1.49
DBP9	YLR276C	SAS3	P34218	831 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	GLG1	P36143	616 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	ECM31	P38122	312 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	POA1	P38218	177 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	UBS1	P38290	277 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	PPE1	P38796	400 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	YEL068C	P39977	110 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	YER010C	P40011	234 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	NMD5	P46970	1048 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	TRF5	P48561	642 aa	Known RBP	5.72	□□□□□ -1.49
DBP9	YLR276C	RAI1	P53063	387 aa	Known RBP	5.72	□□□□□ -1.49
DBP9	YLR276C	LIF1	P53150	421 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	DIG1	Q03063	452 aa	Known RBP	5.72	□□□□□ -1.49
DBP9	YLR276C	ARX1	Q03862	593 aa	Known RBP	5.72	□□□□□ -1.49
DBP9	YLR276C	RAD30	Q04049	632 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	BRX1	Q08235	291 aa	Known RBP	5.72	□□□□□ -1.49
DBP9	YLR276C	TRE1	Q08919	783 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	DIN7	Q12086	430 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	NTO1	Q12311	748 aa		5.72	□□□□□ -1.49
DBP9	YLR276C	RPS17A	P02407	136 aa	Known RBP	5.71	□□□□□ -1.5
DBP9	YLR276C	NUC1	P08466	329 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	FBP1	P09201	348 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	HMG2	P12684	1045 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	ATR1	P13090	542 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	RPS17B	P14127	136 aa	Known RBP	5.71	□□□□□ -1.5
DBP9	YLR276C	POL3	P15436	1097 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	SPO16	P17122	198 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	ISY1	P21374	235 aa	Predicted RBP	5.71	□□□□□ -1.5
DBP9	YLR276C	CMK1	P27466	446 aa	Known RBP	5.71	□□□□□ -1.5
DBP9	YLR276C	SMY1	P32364	656 aa	Known RBP	5.71	□□□□□ -1.5
DBP9	YLR276C	YKL050C	P35736	922 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	NOP4	P37838	685 aa	Known RBP	5.71	□□□□□ -1.5
DBP9	YLR276C	YBR225W	P38321	900 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
DBP9	YLR276C	MEF2	P39677	819 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	ZRG8	P40021	1076 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	MEP1	P40260	492 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	CCT8	P47079	568 aa	Known RBP	5.71	□□□□□ -1.5
DBP9	YLR276C	BPL1	P48445	690 aa	Predicted RBP	5.71	□□□□□ -1.5
DBP9	YLR276C	PEF1	P53238	335 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	DUS1	P53759	423 aa	Known RBP	5.71	□□□□□ -1.5
DBP9	YLR276C	PRO2	P54885	456 aa	Known RBP	5.71	□□□□□ -1.5
DBP9	YLR276C	GPD1	Q00055	391 aa	Known RBP	5.71	□□□□□ -1.5
DBP9	YLR276C	FDC1	Q03034	503 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	RVB1	Q03940	463 aa	Known RBP	5.71	□□□□□ -1.5
DBP9	YLR276C	SSL1	Q04673	461 aa	Predicted RBP	5.71	□□□□□ -1.5
DBP9	YLR276C	YPS7	Q06325	596 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	YLR352W	Q06479	807 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	RCN2	Q12044	265 aa		5.71	□□□□□ -1.5
DBP9	YLR276C	SVS1	Q12254	260 aa		5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms