RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	ERG11	P10614	530 aa		5.73	□□□□□ -1.49
RSA3	YLR221C	ROX1	P25042	368 aa		5.73	□□□□□ -1.49
RSA3	YLR221C	SEF1	P34228	1148 aa		5.73	□□□□□ -1.49
RSA3	YLR221C	UBP11	P36026	717 aa		5.73	□□□□□ -1.49
RSA3	YLR221C	ELO1	P39540	310 aa		5.73	□□□□□ -1.49
RSA3	YLR221C	MET28	P40573	187 aa		5.73	□□□□□ -1.49
RSA3	YLR221C	YJL107C	P42947	387 aa		5.73	□□□□□ -1.49
RSA3	YLR221C	DPB4	Q04603	196 aa	Known RBP	5.73	□□□□□ -1.49
RSA3	YLR221C	RRG1	Q12167	365 aa	Predicted RBP	5.73	□□□□□ -1.49
RSA3	YLR221C	ERP4	Q12450	207 aa		5.73	□□□□□ -1.49
RSA3	YLR221C	CHO1	P08456	276 aa		5.72	□□□□□ -1.49
RSA3	YLR221C	GPA1	P08539	472 aa		5.72	□□□□□ -1.49
RSA3	YLR221C	KRS1	P15180	591 aa	Known RBP	5.72	□□□□□ -1.49
RSA3	YLR221C	TKL1	P23254	680 aa	Known RBP	5.72	□□□□□ -1.49
RSA3	YLR221C	STE50	P25344	346 aa		5.72	□□□□□ -1.49
RSA3	YLR221C	ROK1	P45818	564 aa	Predicted RBP	5.72	□□□□□ -1.49
RSA3	YLR221C	UBP8	P50102	471 aa		5.72	□□□□□ -1.49
RSA3	YLR221C	VPS38	Q05919	439 aa		5.72	□□□□□ -1.49
RSA3	YLR221C	PIG1	Q06216	648 aa		5.72	□□□□□ -1.49
RSA3	YLR221C	AVL9	Q12500	764 aa		5.72	□□□□□ -1.49
RSA3	YLR221C	NFU1	P32860	256 aa		5.71	□□□□□ -1.5
RSA3	YLR221C	YBR144C	P34215	104 aa		5.71	□□□□□ -1.5
RSA3	YLR221C	YEL057C	P39983	233 aa		5.71	□□□□□ -1.5
RSA3	YLR221C	SNO3	P43544	222 aa		5.71	□□□□□ -1.5
RSA3	YLR221C	PTR3	P43606	678 aa		5.71	□□□□□ -1.5
RSA3	YLR221C	NMD5	P46970	1048 aa		5.71	□□□□□ -1.5
RSA3	YLR221C	BOP3	P53958	396 aa		5.71	□□□□□ -1.5
RSA3	YLR221C	SWF1	Q04629	336 aa		5.71	□□□□□ -1.5
RSA3	YLR221C	COQ11	Q05892	277 aa		5.71	□□□□□ -1.5
RSA3	YLR221C	RIM20	Q12033	661 aa		5.71	□□□□□ -1.5
RSA3	YLR221C	RTN2	Q12443	393 aa		5.71	□□□□□ -1.5
RSA3	YLR221C	EST1	P17214	699 aa	Predicted RBP	5.7	□□□□□ -1.5
RSA3	YLR221C	MDM10	P18409	493 aa		5.7	□□□□□ -1.5
RSA3	YLR221C	CLB2	P24869	491 aa		5.7	□□□□□ -1.5
RSA3	YLR221C	PUP3	P25451	205 aa	Known RBP	5.7	□□□□□ -1.5
RSA3	YLR221C	IMG1	P25626	169 aa		5.7	□□□□□ -1.5
RSA3	YLR221C	COQ3	P27680	312 aa		5.7	□□□□□ -1.5
RSA3	YLR221C	ERG3	P32353	365 aa		5.7	□□□□□ -1.5
RSA3	YLR221C	PXL1	P36166	706 aa		5.7	□□□□□ -1.5
RSA3	YLR221C	VID24	P38263	362 aa		5.7	□□□□□ -1.5
RSA3	YLR221C	TSC10	P38342	320 aa		5.7	□□□□□ -1.5
RSA3	YLR221C	ALG5	P40350	334 aa		5.7	□□□□□ -1.5
RSA3	YLR221C	MET18	P40469	1032 aa		5.7	□□□□□ -1.5
RSA3	YLR221C	YNL162W-A	Q3E7A8	72 aa		5.7	□□□□□ -1.5
RSA3	YLR221C	YER145C-A	A0A023PYF4	145 aa		5.69	□□□□□ -1.5
RSA3	YLR221C	MBR1	P23493	339 aa		5.69	□□□□□ -1.5
RSA3	YLR221C	BOS1	P25385	244 aa		5.69	□□□□□ -1.5
RSA3	YLR221C	ICS2	P38284	255 aa		5.69	□□□□□ -1.5
RSA3	YLR221C	DBP8	P38719	431 aa		5.69	□□□□□ -1.5
RSA3	YLR221C	DOT5	P40553	215 aa		5.69	□□□□□ -1.5
RSA3	YLR221C	MAF1	P41910	395 aa		5.69	□□□□□ -1.5
RSA3	YLR221C	APT1	P49435	187 aa	Known RBP	5.69	□□□□□ -1.5
RSA3	YLR221C	ERG26	P53199	349 aa	Known RBP	5.69	□□□□□ -1.5
RSA3	YLR221C	JJJ1	P53863	590 aa		5.69	□□□□□ -1.5
RSA3	YLR221C	IDP3	P53982	420 aa	Known RBP	5.69	□□□□□ -1.5
RSA3	YLR221C	FIN1	Q03898	291 aa		5.69	□□□□□ -1.5
RSA3	YLR221C	TEN1	Q07921	160 aa		5.69	□□□□□ -1.5
RSA3	YLR221C	YOL159C	Q08300	171 aa		5.69	□□□□□ -1.5
RSA3	YLR221C	GRX6	Q12438	231 aa		5.69	□□□□□ -1.5
RSA3	YLR221C	PGA3	Q12746	312 aa	Known RBP	5.69	□□□□□ -1.5
RSA3	YLR221C	PGK1	P00560	416 aa	Known RBP	5.68	□□□□□ -1.5
RSA3	YLR221C	GAL80	P04387	435 aa		5.68	□□□□□ -1.5
RSA3	YLR221C	PDA1	P16387	420 aa	Known RBP	5.68	□□□□□ -1.5
RSA3	YLR221C	APN1	P22936	367 aa		5.68	□□□□□ -1.5
RSA3	YLR221C	MIA40	P36046	403 aa		5.68	□□□□□ -1.5
RSA3	YLR221C	TCD2	P36101	447 aa	Known RBP	5.68	□□□□□ -1.5
RSA3	YLR221C	BYE1	P36106	594 aa		5.68	□□□□□ -1.5
RSA3	YLR221C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
RSA3	YLR221C	YTP1	P53584	459 aa		5.68	□□□□□ -1.5
RSA3	YLR221C	EAF7	P53911	425 aa	Known RBP	5.68	□□□□□ -1.5
RSA3	YLR221C	EMI2	Q04409	500 aa	Known RBP	5.68	□□□□□ -1.5
RSA3	YLR221C	ARG81	P05085	880 aa		5.67	□□□□□ -1.5
RSA3	YLR221C	NUP1	P20676	1076 aa		5.67	□□□□□ -1.5
RSA3	YLR221C	KGD1	P20967	1014 aa	Known RBP	5.67	□□□□□ -1.5
RSA3	YLR221C	YBL055C	P34220	418 aa	Predicted RBP	5.67	□□□□□ -1.5
RSA3	YLR221C	NUP133	P36161	1157 aa		5.67	□□□□□ -1.5
RSA3	YLR221C	RKM3	P38222	552 aa		5.67	□□□□□ -1.5
RSA3	YLR221C	SMF1	P38925	575 aa		5.67	□□□□□ -1.5
RSA3	YLR221C	IPI3	P53877	555 aa		5.67	□□□□□ -1.5
RSA3	YLR221C	ASI1	P54074	624 aa		5.67	□□□□□ -1.5
RSA3	YLR221C	VTC3	Q02725	835 aa		5.67	□□□□□ -1.5
RSA3	YLR221C	YDR239C	Q03780	787 aa		5.67	□□□□□ -1.5
RSA3	YLR221C	GRC3	Q07845	632 aa		5.67	□□□□□ -1.5
RSA3	YLR221C	PFA4	Q12006	378 aa		5.67	□□□□□ -1.5
RSA3	YLR221C	ATG29	Q12092	213 aa		5.67	□□□□□ -1.5
RSA3	YLR221C	FRE7	Q12333	620 aa		5.67	□□□□□ -1.5
RSA3	YLR221C	SGS1	P35187	1447 aa		5.66	□□□□□ -1.5
RSA3	YLR221C	ART10	P18634	518 aa	Known RBP	5.66	□□□□□ -1.5
RSA3	YLR221C	BUD5	P25300	642 aa	Predicted RBP	5.66	□□□□□ -1.5
RSA3	YLR221C	GAC1	P28006	793 aa		5.66	□□□□□ -1.5
RSA3	YLR221C	SYN8	P31377	255 aa		5.66	□□□□□ -1.5
RSA3	YLR221C	TIF3	P34167	436 aa	Known RBP	5.66	□□□□□ -1.5
RSA3	YLR221C	CST26	P38226	397 aa		5.66	□□□□□ -1.5
RSA3	YLR221C	PET130	P47065	347 aa		5.66	□□□□□ -1.5
RSA3	YLR221C	IMD4	P50094	524 aa	Known RBP	5.66	□□□□□ -1.5
RSA3	YLR221C	TWF1	P53250	332 aa		5.66	□□□□□ -1.5
RSA3	YLR221C	ERG13	P54839	491 aa	Known RBP	5.66	□□□□□ -1.5
RSA3	YLR221C	RSC9	Q03124	581 aa		5.66	□□□□□ -1.5
RSA3	YLR221C	YMR155W	Q03795	547 aa		5.66	□□□□□ -1.5
RSA3	YLR221C	SEG1	Q04279	960 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 142 ms